Query= MSMg01no532_d22.b1 MSMg01no532_d22.b1 CHROMAT_FILE:
MSMg01no532_d22.b1 PHD_FILE: MSMg01no532_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:07 2005
(691 letters)
>mm_chr14_93883962_93885052
Length = 1091
Score = 1297 bits (671), Expect = 0.0
Identities = 684/689 (99%), Gaps = 5/689 (0%)
Strand = Plus / Plus
Query: 5 gaattccactgagtg--tacaacataaataattgttactattttttaatcttcatagaaa 62
||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccactgagtgagtaca-cataaataattgttactattttttaatcttcatagaaa 262
Query: 63 caagttaggattatacaatgttttatgttcattttttttctccagattacagatccaagt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 caagttaggattatacaatgttttatgttcattttttttctccagattacagatccaagt 322
Query: 123 tgtctctcatacttttatttttttccatccaaaagtatcaatggaaatcaactctttgct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgtctctcatacttttatttttttccatccaaaagtatcaatggaaatcaactctttgct 382
Query: 183 tttaccaactctgataagttaaagttaagttgtccatatttagtaacattttagtttagt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tttaccaactctgataagttaaagttaagttgtccatatttagtaacattttagtttagt 442
Query: 243 aacaaaatattcaagtatttaaaacatatcaaacaaaatgttacttatattacttctcat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aacaaaatattcaagtatttaaaacatatcaaacaaaatgttacttatattacttctcat 502
Query: 303 gtgtatcagaattcataataataaataaatatttttaactttatttaaaatatcattgtc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtgtatcagaattcataataataaataaatatttttaactttatttaaaatatcattgtc 562
Query: 363 atttaaaccattaatttagagtaatcgttattgatttaacaggtaattattaaataagaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atttaaaccattaatttagagtaatcgttattgatttaacaggtaattattaaataagaa 622
Query: 423 taaacccctatattgtcaatgagtatgtgctatcacataagtacctttaaacaatgattg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 taaacccctatattgtcaatgagtatgtgctatcacataagtacctttaaacaatgattg 682
Query: 483 gcatactgccctagaaaactgaactttgaatttataatagctaaattatatagtttaaaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gcatactgccctagaaaactgaactttgaatttataatagctaaattatatagtttaaaa 742
Query: 543 atttgaggtgataagtgtataatagtatattcatttaagaaaatgtaaattttcatttaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atttgaggtgataagtgtataatagtatattcatttaagaaaatgtaaattttcatttaa 802
Query: 603 aaatgaaatatagtctctcattttctactagattaggagtatgataaacatcaaaggctt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 aaatgaaatatagtctctcattttctactagattaggagtatgataaacatcaaaggctt 862
Query: 663 tgcttgaaagt-actacctatatactact 690
|||||||| || |||||||||||||||||
Sbjct: 863 tgcttgaa-gttactacctatatactact 890
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_d22.g1 MSMg01no532_d22.g1 CHROMAT_FILE:
MSMg01no532_d22.g1 PHD_FILE: MSMg01no532_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:07 2005
(666 letters)
>mm_chr14_93952226_93953291
Length = 1066
Score = 1100 bits (569), Expect = 0.0
Identities = 569/569 (100%)
Strand = Plus / Minus
Query: 1 aatgcatgttcatttacagtgactggaaatcttcccagaaacagttatatttgaacacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aatgcatgttcatttacagtgactggaaatcttcccagaaacagttatatttgaacacct 510
Query: 61 ggagagtacacagtcgaaaacaatgtattgtgtaatatatcagagaggagaagaaatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggagagtacacagtcgaaaacaatgtattgtgtaatatatcagagaggagaagaaatcaa 450
Query: 121 caacatatatattaagagagtatagaaatgagaaaaggtcagtggtaatgtatatttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 caacatatatattaagagagtatagaaatgagaaaaggtcagtggtaatgtatatttaaa 390
Query: 181 gaaatgtattgcattgacttagtaatcatgacatttgttttcattaatgtgaagtgtagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gaaatgtattgcattgacttagtaatcatgacatttgttttcattaatgtgaagtgtagg 330
Query: 241 attctctctttgaccagaatttaattacatattcctaaacaaattatacaagcttatttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 attctctctttgaccagaatttaattacatattcctaaacaaattatacaagcttatttt 270
Query: 301 catatattttctatgttctagcagttttgtaacctgaacattttgaaatatccaccaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 catatattttctatgttctagcagttttgtaacctgaacattttgaaatatccaccaagt 210
Query: 361 gtttcaatgatataattaatagtttataaaaaaatattacaatatttgtatattaccata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gtttcaatgatataattaatagtttataaaaaaatattacaatatttgtatattaccata 150
Query: 421 tacactcatgaaaccatagttgtgaaagataatttaaactttaacaattaaaatagtgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tacactcatgaaaccatagttgtgaaagataatttaaactttaacaattaaaatagtgtt 90
Query: 481 catattcttataaaattaactgtactattctgtagttacatgtagtgactgtttaagttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 catattcttataaaattaactgtactattctgtagttacatgtagtgactgtttaagttg 30
Query: 541 gcctaacaacttaagttttaatgtcatta 569
|||||||||||||||||||||||||||||
Sbjct: 29 gcctaacaacttaagttttaatgtcatta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
