Query= MSMg01no533_d16.b1 MSMg01no533_d16.b1 CHROMAT_FILE:
MSMg01no533_d16.b1 PHD_FILE: MSMg01no533_d16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:23 2005
(633 letters)
>mm_chr14_80412003_80413035
Length = 1033
Score = 1197 bits (619), Expect = 0.0
Identities = 626/629 (99%), Gaps = 2/629 (0%)
Strand = Plus / Plus
Query: 7 gaattctgcctcagaactaaatgacctttctagtttatggaaagtggtaccataaatctt 66
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 207 gaattctgcctcagaactaaatgacctttctggtttatggaaagtggtaccataaatctt 266
Query: 67 aatgacttgtctttggccacttgaagtcaggcatcttctctgtcctggatttatcttcat 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aatgacttgtctttggccacttgaagtcaggcatcttctctgtcctggatttatcttcat 326
Query: 127 gaggctagaaacacagtttccctgattgtgggtatcttccctttttgaatgaccacctat 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaggctagaaacacagtttccctgattgtgggtatcttccctttttgaatgaccacctat 386
Query: 187 ttctcttagagttattctccacatactgaaatttcttgtgcatcaggccttatgtagatc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttctcttagagttattctccacatactgaaatttcttgtgcatcaggccttatgtagatc 446
Query: 247 tgtttggagttgttttgtacaaggtaatagatatgaatcaattcctagtcttctgcatgc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgtttggagttgttttgtacaaggtaatagatatgaatcaattcctagtcttctgcatgc 506
Query: 307 agcagtccagctggaattgtgtaatttgttgaaggtgctgtcttttcttcagtgtgcatt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agcagtccagctggaattgtgtaatttgttgaaggtgctgtcttttcttcagtgtgcatt 566
Query: 367 ttctgcctttttgtcgaaagtcaggtgtccactgatgtgtgtggagttatatctcaccct 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ttctgcctttttgtcgaaagtcaggtgtccactgatgtgtgtggagttatatctcaccct 626
Query: 427 caattctattacattgatccatgtgtctgtttttaatgccagtgccatactgattttttt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 caattctattacattgatccatgtgtctgtttttaatgccagtgccatactgattttttt 686
Query: 487 tt--attactatggctctgtagtacagcttgaaatgtgggatggtgatttgtccaacaca 544
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ttttattactatggctctgtagtacagcttgaaatgtgggatggtgatttgtccaacaca 746
Query: 545 gcattaaaacagctctggatggcatattgctatacccatagatcagtgcatcactcaaca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gcattaaaacagctctggatggcatattgctatacccatagatcagtgcatcactcaaca 806
Query: 605 ctcagcaacgaagcttcttcttgaaatag 633
|||||||||||||||||||||||||||||
Sbjct: 807 ctcagcaacgaagcttcttcttgaaatag 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_d16.g1 MSMg01no533_d16.g1 CHROMAT_FILE:
MSMg01no533_d16.g1 PHD_FILE: MSMg01no533_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:23 2005
(554 letters)
>mm_chr14_80577220_80578173
Length = 954
Score = 553 bits (286), Expect = e-161
Identities = 301/306 (98%)
Strand = Plus / Minus
Query: 1 ctatacatctttgcctttgcccctcaattccatcaaagccccacatatgaacacacacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ctatacatctttgcctttgcccctcaattccatcaaagccccacatatgaacacacacac 247
Query: 61 atacaaacttaataaatacgtgtagaccttataagtattttacatctgtggtcgtttaaa 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atacaaacttaataaatacttgtagaccttataagtattttacatctgtggtcgtttaaa 187
Query: 121 tgaccctgatagactcttatatgtgaacacttggttcccagctggcagaactgtttagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tgaccctgatagactcttatatgtgaacacttggttcccagctggcagaactgtttagga 127
Query: 181 aggattaggaggtgtgtccttgttggaggaggtgtgccactgggcatgggcaggtttcaa 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 aggattagaaggtgtgtccttgttggaggaggtgtgccactgggcatgggcaggtttcaa 67
Query: 241 aagcatataccattctgtattaactttctatcaacctgtctgtctgttggtctctctgtc 300
||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 66 aagcatataccattccatattaattttctatcaacctgtctgtctgttggtctctctgtc 7
Query: 301 tatcta 306
||||||
Sbjct: 6 tatcta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
