Query= MSMg01no533_h16.b1 MSMg01no533_h16.b1 CHROMAT_FILE:
MSMg01no533_h16.b1 PHD_FILE: MSMg01no533_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:42 2005
(443 letters)
>mm_chr14_49630470_49631312
Length = 843
Score = 857 bits (443), Expect = 0.0
Identities = 443/443 (100%)
Strand = Plus / Minus
Query: 1 gcacatgacatctccttatccataggctaagaatgaagactggcccctccattactgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gcacatgacatctccttatccataggctaagaatgaagactggcccctccattactgaag 584
Query: 61 atgatagagtatataatgaacccttatcaagaattattagataatagttgagtggatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 atgatagagtatataatgaacccttatcaagaattattagataatagttgagtggatgga 524
Query: 121 tttttagagtatgaccatgtaatcattccatgacagttactggcctcatttaggagtgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tttttagagtatgaccatgtaatcattccatgacagttactggcctcatttaggagtgcc 464
Query: 181 attgctgggagtccttagggtcttccttgctttaaaaagtgctgctaacataggttaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 attgctgggagtccttagggtcttccttgctttaaaaagtgctgctaacataggttaaag 404
Query: 241 gaggttaaattcaaatttagtttaaagcaggcaatttgtgttatattttctttgatcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gaggttaaattcaaatttagtttaaagcaggcaatttgtgttatattttctttgatcttt 344
Query: 301 ccctttttctttccttctaaatacttcactatctgaatactaccttactgatacacagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ccctttttctttccttctaaatacttcactatctgaatactaccttactgatacacagcc 284
Query: 361 tgaataataattaccattattgattcaaagtagaggatttactgattgcttgagatgcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tgaataataattaccattattgattcaaagtagaggatttactgattgcttgagatgcct 224
Query: 421 gtgtctacattagtatacatcca 443
|||||||||||||||||||||||
Sbjct: 223 gtgtctacattagtatacatcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_h16.g1 MSMg01no533_h16.g1 CHROMAT_FILE:
MSMg01no533_h16.g1 PHD_FILE: MSMg01no533_h16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:42 2005
(572 letters)
>mm_chr14_49460193_49461164
Length = 972
Score = 1025 bits (530), Expect = 0.0
Identities = 553/572 (96%), Gaps = 18/572 (3%)
Strand = Plus / Plus
Query: 1 acgctaatggacccgaaaaactgatttcagaattaaacacatccacagtgaaaatatagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acgctaatggacccgaaaaactgatttcagaattaaacacatccacagtgaaaatatagg 260
Query: 61 tcctcttctggaccagaaataggtttgccatgtcttagaaagaaccagagtaacaaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctcttctggaccagaaataggtttgccatgtcttagaaagaaccagagtaacaaaaga 320
Query: 121 tttgtccaccttcagtgccgtccaggcacctgcgcatcctttgcaatgatacccagtgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgtccaccttcagtgccgtccaggcacctgcgcatcctttgcaatgatacccagtgca 380
Query: 181 atttttcatttctcccagaaaggcttttaaaatttttaaactgagacttttaaataaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttttcatttctcccagaaaggcttttaaaatttttaaactgagacttttaaataaata 440
Query: 241 tgtgtgacgtgcctcactcggtcagtacatttgtcacatttaatttctgtgaatattggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgtgacgtgcctcactcggtcagtacatttgtcacatttaatttctgtgaatattggc 500
Query: 301 tacatgtgatcaggacaaatggtacagattgtgtgccttctcctctctttatcagatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacatgtgatcaggacaaatggtacagattgtgtgccttctcctctctttatcagatgat 560
Query: 361 ctacttaatggccctcacacagttgtcctattatacatacatgcagagagagagagagag 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctacttaatggccctcacacggttgtcctattatacatacatgcagagagagagagagag 620
Query: 421 agagagagagagagagagagagagagagagattgagatttaattgttttaagacaatcac 480
||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 621 agagagagagaga------------------ttgagatttaattgttttaagacaatcac 662
Query: 481 ctctctcccatcaacccctaaagaaacagccgttaaaccagcatccatccaaactgtttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ctctctcccatcaacccctaaagaaacagccgttaaaccagcatccatccaaactgtttt 722
Query: 541 ggccaattttcttaatgtttcagcagggctta 572
||||||||||||||||||||||||||||||||
Sbjct: 723 ggccaattttcttaatgtttcagcagggctta 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
