Query= MSMg01no533_l23.b1 MSMg01no533_l23.b1 CHROMAT_FILE:
MSMg01no533_l23.b1 PHD_FILE: MSMg01no533_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:02 2005
(301 letters)
>mm_chr14_80397955_80398654
Length = 700
Score = 484 bits (250), Expect = e-141
Identities = 284/296 (95%), Gaps = 3/296 (1%)
Strand = Plus / Minus
Query: 5 gaattcacttgatctc-acacttatggtgttgcctttacctctacccacactgaagcatc 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gaattcacttgatctcaacacttatggtgttgcctttacctctacccacactgaagcatc 439
Query: 64 tttgtcaagtcatctgagagtatctacgcaggccaatgttatacctggtccatggaacat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tttgtcaagtcatctgagagtatctacgcaggccaatgttatacctggtccatggaacat 379
Query: 124 gggattggaagcagctaaaggagacctaggaagaataaggatgcaatgccagaagctnaa 183
||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| ||
Sbjct: 378 gggattggaagcagctaaaggagaccttggaagaacaaggatgcaatgctagaagc--aa 321
Query: 184 catcatccacctaacatcattcaaaaggaaatttgtggtgaaggacaagacccgagacag 243
||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 320 catcatccacctaacatgattcaaaaggaaatctgtggtgaaggacaagaccagagacag 261
Query: 244 tggactcaaggctagctgttcaaagagcaagaaactatttttaagctcatatgtct 299
| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 260 tagactcaagactagctgttcaaagagtaagaaactatttttaagctcatatgtct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 700
Length adjustment: 9
Effective length of query: 292
Effective length of database: 691
Effective search space: 201772
Effective search space used: 201772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_l23.g1 MSMg01no533_l23.g1 CHROMAT_FILE:
MSMg01no533_l23.g1 PHD_FILE: MSMg01no533_l23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:02 2005
(470 letters)
>mm_chr14_80221533_80222402
Length = 870
Score = 886 bits (458), Expect = 0.0
Identities = 467/470 (99%)
Strand = Plus / Plus
Query: 1 tgggtttgttttttttttttttttttgggtctgaattaattagataccatgttgaattcc 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 tgggtttgttttttttttttttttttggttctgaattaattagataccatgttgaattcc 260
Query: 61 aaatgtgataattaggcaaattaatgctgcagtgaagttattaatgaggcaaaatatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatgtgataattaggcaaattaatgctgcagtgaagttattaatgaggcaaaatatgct 320
Query: 121 aatatgcttttgataaagagctcttcttctgccttaccaaggaattggcaaacatctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatatgcttttgataaagagctcttcttctgccttaccaaggaattggcaaacatctttt 380
Query: 181 atttgaggccagacagctcatctcaagtgatttactaaaaagcttctgggctgtatgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 atttgaggccagacagctcatctcaagtgatttactaaaaagcttctgggccgtatgttg 440
Query: 241 tgaacaaatgctgtaaataggggttaatgtctaaatttttgatgtggctaagtcctgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaacaaatgctgtaaataggggttaatgtctaaatttttgatgtggctaagtcctgttt 500
Query: 301 ctatgtagcaagccccggatgctctttgcctggcatccaggcagcagcagggcccaggaa 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctatgtagcaagccccggatgttctttgcctggcatccaggcagcagcagggcccaggaa 560
Query: 361 ggaaaacccttttctgtgctcctgaaggctggcatgagggtaccaagcgctactgctcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggaaaacccttttctgtgctcctgaaggctggcatgagggtaccaagcgctactgctcac 620
Query: 421 tgggttcattcctgtggacagcaccgcccgccaacactcatcacaaggtg 470
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgggttcattcctgtggacagcaccgcccgccaacactcatcacaaggtg 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
