Query= MSMg01no535_j13.b1 MSMg01no535_j13.b1 CHROMAT_FILE:
MSMg01no535_j13.b1 PHD_FILE: MSMg01no535_j13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:27 2005
(691 letters)
>mm_chr14_104069206_104070296
Length = 1091
Score = 1189 bits (615), Expect = 0.0
Identities = 668/689 (96%), Gaps = 8/689 (1%)
Strand = Plus / Plus
Query: 5 gaattcactagcttgagggttttgtgtcattgctcaagcctagaaactaacctgtggtag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcactagcttgagggttttgtgtcattgctcaagcctagaaactaacctgtggtag 262
Query: 65 gaaggagctggtgctcaggcgtctgcttctcattcctgcatcctttcagtctggcgttga 124
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gaaggagctggtgcccaggtgtctgcttctcattcctgcatcctttcagtctggcgttga 322
Query: 125 cctttgtgctatggaagactgtagtaaagatgctttctcgatgggtgtggtgctgtgtgt 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 323 cctttgtgctatggaagactgtagtaaagatgctttctcgctgggtgtggtgctgtgtgt 382
Query: 185 ctctgctcttcacgctcaggctggagtgggggaa-ttttgaattctaggccagcttgtgc 243
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 383 ctctgctcttcacgctcaggctggagtgggggaaattttgaattccaggccagcttgtgc 442
Query: 244 tacatactaa-tcttgagaggagcctaggttctgtagggagtccctgaaccagtgctttc 302
|||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 443 tacatactaaatcttgagaggagcctaggttctgtagggaacccctgaaccagtgctttc 502
Query: 303 tgtcttgttttcttttcttttcatcagccctcattggtcattttcttttcttaaaagtaa 362
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 503 tgtcttgttttcttttcttttcatcagccctcactggtcattttcttttcttaaaagtaa 562
Query: 363 tttctaaatttaaatatgttttgatcgtattcttccaatgcccaagttcttccagaccct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tttctaaatttaaatatgttttgatcgtattcttccaatgcccaagttcttccagaccct 622
Query: 423 cttcccctccctactcacccaactttaagtttctttaaaaacaaaacaaaataaaacaaa 482
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 623 cttcccctccctacccacccaactttaagtttctttaaaaacaaaacaaaacaaaaca-- 680
Query: 483 aaaacacctccaatacagcaacaaaattcccccaaaaccaagaaaacaaaacactacccc 542
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 681 ----cacctccaatacagcaacaaaattccccccaaaccaagaaaacaaaacactacccc 736
Query: 543 taaagaaataaaaaactaccaaactgtaaccaaataaaagccacagaaaaccttggagtc 602
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 737 taaagaaataaaaaactaccaaactgtaaccaaataaaaaccacagaaaaccttggagtc 796
Query: 603 tattaaatgttggtcaactgctgtgaactcgaagcctgtcctggaatggtgtgtaccttt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 tattaaatgttggtcaactgctgtgaactcgaagcctgtcctggaatggtgtgtaccttt 856
Query: 663 ttactggagaaaactgattttccctctcc 691
||||| ||||||||||||||||||||||
Sbjct: 857 ctactgtagaaaactgattttccctctcc 885
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_j13.g1 MSMg01no535_j13.g1 CHROMAT_FILE:
MSMg01no535_j13.g1 PHD_FILE: MSMg01no535_j13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:27 2005
(630 letters)
>mm_chr14_104209525_104210548
Length = 1024
Score = 617 bits (319), Expect = 0.0
Identities = 333/341 (97%), Gaps = 6/341 (1%)
Strand = Plus / Minus
Query: 290 gggaattaatataggaaagaaatacttatccaaggaccagaaatttccacttgcagagaa 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 gggaattaatataggaaagaaatacttatccaaggaccagaaatttccacttgcagagaa 965
Query: 350 tttctcatgggatcacgatacaaagaccagagtgttcacaggcagcattatttatttcag 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 tttctcatgggatcacgatacaaagaccagagtgttcacaggcagcattatttatttcag 905
Query: 410 tccccaaagggaaacaactcaaactccagtagcaatattttaaattactagaccatatga 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 tccccaaagggaaacaactcaaactccagtagcaatattttaaattactagaccatatga 845
Query: 470 tatgtcaataaaatggaacaagtgctctccacaagttgatcaagctcctcatgattaaaa 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tatgtcaataaaatggaacaagtgctctccacaagttgatcaagctcctcatgattaaaa 785
Query: 530 ttttgattttgagtgctgccctgcatatgtaatgctgggtaggttgttttgaacatgtag 589
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 784 ttttgattttgagtgctgccttgcatatgcaatgctgggtaggttgttttgaacatgtag 725
Query: 590 gatgcttgacagcctacacatcctctaaacatcagtagcat 630
|||||||||||| |||||||||||||||||||||||
Sbjct: 724 gatgcttgacag------catcctctaaacatcagtagcat 690
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1024
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1014
Effective search space: 628680
Effective search space used: 628680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
