Query= MSMg01no535_p05.b1 MSMg01no535_p05.b1 CHROMAT_FILE:
MSMg01no535_p05.b1 PHD_FILE: MSMg01no535_p05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:55 2005
(622 letters)
>mm_chr14_22306947_22307968
Length = 1022
Score = 905 bits (468), Expect = 0.0
Identities = 477/480 (99%)
Strand = Plus / Minus
Query: 143 caggcagaccccagagcaaaggcctgcaggaagaggcagacaaggccaaagtttctacaa 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 caggcagaccccagagcaaaggcctgcaggaagaggcagacaaggccaaagtttctacaa 544
Query: 203 actaatagacttgcttctgacaaggatcctagctggcaggccagcattattgccatactg 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 actaatagacttgcttctgacaaggatcctagctggcaggccagcattattgccatactg 484
Query: 263 gcttaagaatggcccgtgtagctgaagcatcgctccaagaatggtgaccctagaccatcg 322
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 483 gcttaagaatggcccgtgtagctgaagcatcactccaagaatggtgaccctagaccatcg 424
Query: 323 gtgctcgtgcagaaattgcagaagtgctgcttttgtctaagcatccctttcagccctctt 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gtgctcgtgcagaaattgcagaagtgctgcttttgtctaagcatccctttcagccctctt 364
Query: 383 tgatgcatacttggccatggatgccacagtggcaagtgtaggtcaggggacaattcaggg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgatgcatacttggccatggatgccacagtggcaagtgtaggtcaggggacaattcaggg 304
Query: 443 tttgatttttgcctaccatgtaggtcccaaggacccaacagggatcatcaggcttggggg 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tttgatttttgcctaccatgtaggtcccaaggacccaacagggatcatcaggcttggggg 244
Query: 503 agtggcaagcacccttactccctgagccgtctggctaggcatatgttacattttaacagt 562
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 agtggtaagcacccttactccctgagccgtctggctaggcatatgttacattttaacagt 184
Query: 563 attttagtttttgatttttcatatgtagtccaggtatggttgagcccttgaaagacccac 622
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 183 attttagtttttgatttttcatatgtagttcaggtatggttgagcccttgaaagacccac 124
Score = 184 bits (95), Expect = 2e-50
Identities = 95/95 (100%)
Strand = Plus / Minus
Query: 295 ctccaagaatggtgaccctagaccatcggtgctcgtgcagaaattgcagaagtgctgctt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 ctccaagaatggtgaccctagaccatcggtgctcgtgcagaaattgcagaagtgctgctt 959
Query: 355 ttgtctaagcatccctttcagccctctttgatgca 389
|||||||||||||||||||||||||||||||||||
Sbjct: 958 ttgtctaagcatccctttcagccctctttgatgca 924
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_p05.g1 MSMg01no535_p05.g1 CHROMAT_FILE:
MSMg01no535_p05.g1 PHD_FILE: MSMg01no535_p05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:55 2005
(641 letters)
>mm_chr14_22149292_22150333
Length = 1042
Score = 1098 bits (568), Expect = 0.0
Identities = 626/650 (96%), Gaps = 13/650 (2%)
Strand = Plus / Plus
Query: 1 cctgcatgaggtacaacaggcttcctttctcttgagcatggcattaatacaaaaactgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgcatgaggtacaacaggcttcctttctcttgagcatggcattaatacaaaaactgac 260
Query: 61 ccctctgttccctgccaccttccaggagggaaatgctgtcaggagtga----attgaatt 116
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 ccctctgttccctgccaccttccaggagggaaatgctgtcaggagtgagtgaattgaatt 320
Query: 117 tactccctggtaatcagactttacatctgctaagctggagtcagagtttattcctcatgt 176
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 tactccctggtaatcagactttacatctgctaagctggagtcagagtttatccctcatgt 380
Query: 177 tatgtagaacttggaattgggccacaagtagtactgcagaataaactaggataacttatg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatgtagaacttggaattgggccacaagtagtactgcagaataaactaggataacttatg 440
Query: 237 cttgttgcagagaacatccgggtgaccaataatagtcaaaaaaaagatacagttactaaa 296
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 cttgttgcagagaacatcccggtgaccaataatagtcaaaaaaa-gatacagttactaaa 499
Query: 297 caacattatcccagcagataggggcagatagtgttatttcttaacagcaaatggaagaat 356
||||||||||||||| || || || ||||||||||||||||||||||||||||||||||
Sbjct: 500 caacattatcccagctga--ggagccgatagtgttatttcttaacagcaaatggaagaat 557
Query: 357 ggaggtttataaaaactgtgccgttgatgttaggagtggggatgcctaggtagagccaag 416
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 558 ggaggtttataaaaactgtgccattgacgttaggagtggggatgcctaggtagagccaag 617
Query: 417 cccttgctagaaatagtctcatctctttctgctcttgctca-cagacttgtattaacttg 475
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |
Sbjct: 618 cccttgctagaaatagtctcatctctttctgctcttgct-atcagacttgtattaactcg 676
Query: 476 gttttcatttttctccttaaatatgtgt----gttttgcctgtgtgtcacctatctttgt 531
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 677 gttttcatttttctccttaaatatgtgtaagtgttttgcctgtgtgtcacctatctttgt 736
Query: 532 gccacttatgttcctggtacccatggaggccagaggagggtttcagaacccttagtcact 591
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 737 gacacttgtgttcctggtacccatggaggccagaggagggtttcagaacccttagccact 796
Query: 592 agagttgcaggtggtctgtgagctgccatgtggctgtggggatctaaccc 641
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 agagttgcaggtggtctgtgagctgccatgtggctgtggggatctaaccc 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1042
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1032
Effective search space: 651192
Effective search space used: 651192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
