CTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTACATTTTGCTCCAAATGCAGCCAGGAGATGATTTCTTTCCTCAG
GCACCTAAGAGGAGGGTCTCATTCCATACTGGGTGGAGCCTAAGCAAAAG
AGGAGACCTCAACCCCCACCCCAACAGTGACATATTTCCTCCAACAAGGC
TATACCTCCTCTGATAAGGCCATACCTCCTAATAGTAGCATTTCCCATGG
TCCAATCATATTCAAATCACAACCCCACCACAGATGTGTGTGTGTGTGTG
TGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTNNNNNNNNNNNNN
NNNNNNNNTTTTTTTTTTNTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTNNNNNTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTNT
TTTTTTTTTTTTTTTTTATTTTTTTTTTTTTNTTTTTTTTTTTTTTNTTT
TTTTNTTTTTTTTTTTTTTTTTNTTTTTTTNTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTNTTTTTNNTTTTTTTTTTTTTNTTTTT
TTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTNTTNNTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTNNNTTTTTNTNTTNTTTT
TTTTTTTTTTTTTTTTTTTTNTTTTTTTTNTTATTTTTNAGTNNNTTTNT
TNTTTTTTTTC

GGGAGGATGAGAGGGGGGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCATAGAAATTTCCTACAAAC
TTACATGCATCTTTCAGATTTCATATTTAGAATCTAATGAAATATTTTAG
AAAAATTATATTTTATTATTACTTATTTTATTTTGAAATACAAAGTATAT
TTCTAAAGTATAGAAGTGAGTTTGAAAAAGACAAGAATTCTGAAGATATT
GAGGGAGACTGAGCCAAATAACAATGTTTTGTTTTGTTTTTAATTTTGCT
TGTTTTCTCTAAAACATATTTTATGAAATAAGGAAAACATAAAAAAATTA
AGACAGTGGAATTTATATTTACAGGAACATGTTGAAAAGATTTACTTCAA
ATGATAGTTCTATTGTATAGAAATATTCAGCGCTTCATTTTCTACTTGAT
AGAATAAATTGTGTTTAAAGTTAAGAGGTATTGCATTGCTATGCAGTACT
TAGATATAAACTCAGACTTAGTTACTCATATTACATATATTGTATCATTG
AGATAATAAATACTTGCCACTTTTAAACCATAATACATTGTTATTATATA
CTAACCATTTGCTTCCTAGTCATGGACTAACAATTAAGCAGTAAACATTG
AAACTTATTTTTACTAACTCGTTGCCAATAGTGAATAACCATTAATAAAA
TGTCTAATGAATAAAATTTTGTGTTGACTAGATAT

Query= MSMg01no539_c16.g1 MSMg01no539_c16.g1 CHROMAT_FILE:
MSMg01no539_c16.g1 PHD_FILE: MSMg01no539_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:01 2005
         (641 letters)



>mm_chr14_82885445_82886485
          Length = 1041

 Score = 1208 bits (625), Expect = 0.0
 Identities = 637/641 (99%), Gaps = 1/641 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccatagaaatttcctacaaacttacatgcatctttcagatttcatatttagaatctaatg 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 202 ccatagaaatttcctacaaacttacatgcatctttcagatttcatatt-agaatctaatg 260

                                                                       
Query: 61  aaatattttagaaaaattatattttattattacttattttattttgaaatacaaagtata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatattttagaaaaattatattttattattacttattttattttgaaatacaaagtata 320

                                                                       
Query: 121 tttctaaagtatagaagtgagtttgaaaaagacaagaattctgaagatattgagggagac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctaaagtatagaagtgagtttgaaaaagacaagaattctgaagatattgagggagac 380

                                                                       
Query: 181 tgagccaaataacaatgttttgttttgtttttaattttgcttgttttctctaaaacatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagccaaataacaatgttttgttttgtttttaattttgcttgttttctctaaaacatat 440

                                                                       
Query: 241 tttatgaaataaggaaaacataaaaaaattaagacagtggaatttatatttacaggaaca 300
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 tttatgaaataaggaaaacataaaaaatttaagacagtggaatttatatttacaggaaca 500

                                                                       
Query: 301 tgttgaaaagatttacttcaaatgatagttctattgtatagaaatattcagcgcttcatt 360
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgttgaaaagagttacttcaaatgatagttctattgtatagaaatattcagcgcttcatt 560

                                                                       
Query: 361 ttctacttgatagaataaattgtgtttaaagttaagaggtattgcattgctatgcagtac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctacttgatagaataaattgtgtttaaagttaagaggtattgcattgctatgcagtac 620

                                                                       
Query: 421 ttagatataaactcagacttagttactcatattacatatattgtatcattgagataataa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttagatataaactcagacttagttactcatattacatatattgtatcattgagataataa 680

                                                                       
Query: 481 atacttgccacttttaaaccataatacattgttattatatactaaccatttgcttcctag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atacttgccacttttaaaccataatacattgttattatatactaaccatttgcttcctag 740

                                                                       
Query: 541 tcatggactaacaattaagcagtaaacattgaaacttatttttactaactcgttgccaat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 741 tcatggactaacaattaagcagtaaacattgaaacttatttttactaactcattgccaat 800

                                                    
Query: 601 agtgaataaccattaataaaatgtctaatgaataaaatttt 641
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agtgaataaccattaataaaatgtctaatgaataaaatttt 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)