Query= MSMg01no539_h10.b1 MSMg01no539_h10.b1 CHROMAT_FILE:
MSMg01no539_h10.b1 PHD_FILE: MSMg01no539_h10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:25 2005
(671 letters)
>mm_chr14_8993483_8994548
Length = 1066
Score = 1160 bits (600), Expect = 0.0
Identities = 645/666 (96%), Gaps = 12/666 (1%)
Strand = Plus / Minus
Query: 5 gaattcatggttgcgagtggtaatctcagcataccatagctggactctggcctcacaacc 64
|||||||||| || |||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 746 gaattcatgggtgagagtggtagtctcagcataccacagctggactctggcctcacaacc 687
Query: 65 ttacaggcactacaagagtttgggagttaggagtgctttcagtaaatggatcttcatttg 124
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 686 ttacaggcactacaagagtttgggagttaggggtgccttcagtaaatggatcttcatttg 627
Query: 125 ttctaggtgaaggctgaaactgtcacttaacaaacccctcgggtattaatatcgatattg 184
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 626 ttctaggtgaaggctgaaactgtcacttaacaaacccctcgtgtattaatatcgatattg 567
Query: 185 atatcaatataccatctgaagtactatgcctgtataatgaatgaaagaatgaacatcctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 atatcaatataccatctgaagtactatgcctgtataatgaatgaaagaatgaacatcctg 507
Query: 245 atatttgctcacaaagagctgggctagcctgtgcctgaataacaaactgaagaggggact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atatttgctcacaaagagctgggctagcctgtgcctgaataacaaactgaagaggggact 447
Query: 305 gtgtgagaagtggagctgtttaatccagtgggaggagagtaaataccctgattcctgctc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gtgtgagaagtggagctgtttaatccagtgggaggagagtaaataccctgattcctgctc 387
Query: 365 ataggaagctggaccaaccagtcccaaagggcctgatatcccatgaagcccatttttcct 424
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ataggaagctggaccaa-----cccaaagggcctgatatcccatgaagcccatttttcct 332
Query: 425 tgttagacctgtcagaattacagcaggccttggtgcatacactaagacaagggtagaacc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tgttagacctgtcagaattacagcaggccttggtgcatacactaagacaagggtagaacc 272
Query: 485 agatactggaagctgaggggaggccctaagaaatagaagggcagaactggaagaggtggg 544
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 271 agatactggaagctgaggggaggccctaagaaatagaagggcagaattggaagagatggg 212
Query: 545 aacccactgggagctcatctctgagcataagccccatctagtcattgtctttggccattt 604
||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 aacccac------c-catctctgagcataagccccatctagtcattgtctttggccattt 159
Query: 605 taagtctgttagcttcttttaaaggttagtgagtatagggtagagccattagcagcaatg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 taagtctgttagcttcttttaaaggttagtgagtatagggtagagccattagcagcaatg 99
Query: 665 tcagga 670
||||||
Sbjct: 98 tcagga 93
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1066
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1056
Effective search space: 698016
Effective search space used: 698016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_h10.g1 MSMg01no539_h10.g1 CHROMAT_FILE:
MSMg01no539_h10.g1 PHD_FILE: MSMg01no539_h10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:25 2005
(493 letters)
>mm_chr14_8809583_8810475
Length = 893
Score = 890 bits (460), Expect = 0.0
Identities = 484/492 (98%), Gaps = 1/492 (0%)
Strand = Plus / Plus
Query: 3 gaattctggtttcttttttaaaacacggaaatattatgagaatatgtttttgtcttaatc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattctggtttcttttttaaaacacggaaatattatgagaatatgtttttgtcttaatc 261
Query: 63 ccaggtgtgagatatggggctgttttagtttgaccacagcctctgactgtgatttgtctc 122
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 262 ccaggtgtgagatatggggctgttttagtttgaccacagcctctgactgtgacttgtctc 321
Query: 123 gtgctctgtgaggggtgtgattttgccagctgcagatagattctgatttggaattctggg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtgctctgtgaggggtgtgattttgccagctgcagatagattctgatttggaattctggg 381
Query: 183 gacttttcagaggggtatataaaagttaggtccccaagaggc-tagttggttgttggcca 241
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 382 gacttttcagaggggtatataaaagttaggtccccaagaggcgtagttggttgttggccc 441
Query: 242 attgctgattgctgttagtcacagtttgttaagtagttgtgtgcaagaaagaaacaacaa 301
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 attgctgattgctgctagtcacagtttgttaagtagttgtgtgcaagaaagaaacaacaa 501
Query: 302 gaagaccttagatatcctgacagtgcagatcaaacttgttccaaggaactcaatacctct 361
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 502 gaagaccttagatatcctgacagtgcagatcaaacttgttccaaggaactcaacacccct 561
Query: 362 aaacagcaggaaatagtctgacaaccacttcctgttaagggcccactaatactgcctgag 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aaacagcaggaaatagtctgacaaccacttcctgttaagggcccactaatactgcctgag 621
Query: 422 aaactgtcccttctaggaggcactgctacatgcggaggcttgagacaggctccagccagt 481
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 622 aaactgtcccttctaggaggcactgctacatgtggaggctggagacaggctccagccagt 681
Query: 482 ggctgggacttc 493
||||||||||||
Sbjct: 682 ggctgggacttc 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
