Query= MSMg01no539_p02.b1 MSMg01no539_p02.b1 CHROMAT_FILE:
MSMg01no539_p02.b1 PHD_FILE: MSMg01no539_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:04 2005
(343 letters)
>mm_chr14_107502630_107503372
Length = 743
Score = 613 bits (317), Expect = e-180
Identities = 328/333 (98%), Gaps = 4/333 (1%)
Strand = Plus / Plus
Query: 5 gaattcacttctcc--gcaaccacatggtatctcacagccatctataatgtgatttgatg 62
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttc--caagcaaccacatggtatctcacagccatctataatgtgatttgatg 262
Query: 63 ccctcttctggtgtgtctctagacagctacagtgtacttatatacataaaataaataaac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ccctcttctggtgtgtctctagacagctacagtgtacttatatacataaaataaataaac 322
Query: 123 actttaaaaaatgacctttgcatgaataataattatttattttatagtattaactgaatg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 actttaaaaaatgacctttgcatgaataataattatttattttatagtattaactgaatg 382
Query: 183 ctatattttcttttccttttagtctgtgtgtttgtatgtttgcatttgtgcatgtaccta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctatattttcttttccttttagtctgtgtgtttgtatgtttgcatttgtgcatgtaccta 442
Query: 243 cacatctacaaatatataagtaaaacctgctaagtctctattggtttgtgtgtgtgtgtg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cacatctacaaatatataagtaaaacctgctaagtctctattggtttgtgtgtgtgtgtg 502
Query: 303 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 335
||||||||||||||||||||||||| |||||||
Sbjct: 503 tgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgt 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_p02.g1 MSMg01no539_p02.g1 CHROMAT_FILE:
MSMg01no539_p02.g1 PHD_FILE: MSMg01no539_p02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:04 2005
(160 letters)
>mm_chr14_107664781_107665340
Length = 560
Score = 286 bits (148), Expect = 4e-82
Identities = 157/160 (98%)
Strand = Plus / Minus
Query: 1 agtctccggtgctatgaccgctgactgctctcagccactcagctctgacagtgtggttct 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agtctctggtgctatgaccgctgactgctctcagccactcagctctgacagtgtggttct 301
Query: 61 gtcctctctgaggtttctggtgtatcctgtgagactaaggtttggactaagtggcatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtcctctctgaggtttctggtgtatcctgtgagactaaggtttggactaagtggcatttt 241
Query: 121 gccatgttttatttaagatgctgcaaagacaaaaccattt 160
|||| ||||||||||||||||||||||||||||| |||||
Sbjct: 240 gccaggttttatttaagatgctgcaaagacaaaaacattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 160
Length of database: 560
Length adjustment: 8
Effective length of query: 152
Effective length of database: 552
Effective search space: 83904
Effective search space used: 83904
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
