TTTATCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCACTCCTTCTCACTCCCATTCTCGGGGTGTAATAGTGGGG
TGATGGGCAAGCAACGAATCGGGAGCTGTCACGCCATATCAGGTGCTGAA
ACGTCACGCTGCAGGTTATAAAAGCAGCGCCATTTTCCCGGTTCGGGATC
TTCCTGAGAAGCAAGCAATAAAGCTTTTGCCGTGGAAGATTCTGGTTTGT
TGCATCTTTCTTGCCGGTCGAGCGGGACGCAATAAGTGGCATCGAAGAAC
CCGGGAACTGTCATCACACCGGCGAAAGGAAGATCCCTCATTCGCGGGGC
AGAATCAGAACCGTGGGACAAAAGGCTCTACAAGGTACGTACAATCTTGA
AATTTCTCCAGAGTTAGAAGCCCTTTTGATTGTTTGCACGGGGCGATTAT
GAGGATTGTCAGCAAATGGTAGAAGCGGGGCAGAAAGTTCTGGATGAAAT
TCAAGAAAGTCTATCAGAGGTAGAGCGGGGAGAGAGAGTAAAAGTAGAGA
GGAAACAAAGTACACTGAAGAATTTAGGCCTTTCCACGGTCCTTGAGCCC
GAGGAAAAGAGATATAAAGGAAAGAATGCCTTGGGAGAGATAAGAAAAAG
GGATGGAAAGGGAGAGAAGAAGGGAGATCGAGCTGGAGAGGCACATAAGG
AAAGGAGCCTCTACCCACCACTGGGTTGAATTTAAGCAGCTTAGCTCTTA
GTAGCTC

NTCCTATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXACAGGTAAAGGCCACTAGTCAG
AGATCAGTCATCAGGCACACATCGACACACACAGGTCACTAAAGGTAGGC
ATACATGCAATCCTGCACCCAGGCTACACAGAGATGTGCATACAGGCCTT
CAGAGAGACACAGATAGGAAGTCTGTAAGTGATGAGAGCAAAGGCACACA
CACACACACATACACACACACACACACACACACACACACACACACAGAGG
GAGAGAGAGAGAGAGAGAGAGAGTATTTTACATTTTGATGGAAGTCATTA
TAAAACAGTTCATTTCCTAAGAGATTCCACCTCACACCAGTCAGAATGGC
TAAGATCAAAAATTCAGGTGACAGCACATGCTGGCATGGATGTGGAGAAA
AAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTC
TGGAAATCAGTCTGGCGCTTCCTCAGAAAATTGGACATAGTACTACCGGA
GGATCCAGCAATACCTCTCCTGGGGAAGATGCCCCAACTGGCAAGAAGGA
CACATGCTCCACTATGTACATAGCAGTCTTATTTATAATAGCCAGAATCT
GGAAAGAACCCATATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGG
TACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTAT
GA

Query= MSMg01no539_p06.g1 MSMg01no539_p06.g1 CHROMAT_FILE:
MSMg01no539_p06.g1 PHD_FILE: MSMg01no539_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:05 2005
         (509 letters)



>mm_chr14_107300401_107301309
          Length = 909

 Score =  789 bits (408), Expect = 0.0
 Identities = 492/544 (90%), Gaps = 41/544 (7%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaggtaaaggccactagtcagagatcagtcatcaggcacacatcgacacacacaggtca 60
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 acaggtaaaggccactagtcagagatcagtcatcaggcacacattgacacacacaggtca 260

                                                                       
Query: 61  ctaaaggtaggcatacatgcaatcctgcacccaggctacacagagatgtgcatacaggcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaaaggtaggcatacatgcaatcctgcacccaggctacacagagatgtgcatacaggcc 320

                                                                       
Query: 121 ttcagagagacacagataggaagtctgtaagtgatgagagcaaaggcacacacacacaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcagagagacacagataggaagtctgtaagtgatgagagcaaaggcacacacacacaca 380

                                                                       
Query: 181 catacacacacacacacacacacacacacacacacacagag-------------g-gaga 226
           |  ||||||||||||||||||||||||||||||| | ||||             | ||||
Sbjct: 381 c--acacacacacacacacacacacacacacacagagagagagagagagagagagagaga 438

                                                                       
Query: 227 gagagagagagagagagag---------------------tattttacattttgatggaa 265
           |||||||||||||||||||                      |    ||||||||||||||
Sbjct: 439 gagagagagagagagagagacagagacagagacagagagaga----acattttgatggaa 494

                                                                       
Query: 266 gtcattataaaacagttcatttcctaagagattccacctcacaccagtcagaatggctaa 325
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gtcattataaaaaagttcatttcctaagagattccacctcacaccagtcagaatggctaa 554

                                                                       
Query: 326 gatcaaaaattcaggtgacagcacatgctggcatggatgtggagaaaaaggaacactcct 385
           ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 555 gatcaaaaattcaggtgacagcagatgctggcgtggatgtggagaaagaggaacactcct 614

                                                                       
Query: 386 ccattgttggtgggattgcaggcttgtacaaccactctggaaatcagtctggcgcttcct 445
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ccattgttggtgagattgcaggcttgtacaaccactctggaaatcagtctggcgcttcct 674

                                                                       
Query: 446 cagaaaattggacatagtactaccggaggatccagcaatacctctcctggggaagatgcc 505
           |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 675 cagaaaattggacatagtactaacggagaatccagcaatacctctcctggggaagatgcc 734

               
Query: 506 ccaa 509
           ||||
Sbjct: 735 ccaa 738


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space:   448601
Effective search space used:   448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)