CTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGCCATAGCTAGTAACCTAGAATGTCATCTATTCTCTGATTTGTA
TTTTTCTGCTACCCTCTTTTAAAAAATCCACTTGTGGCCATTAGGAGTAG
GAAGTTGGGACTATTTGGGGCTCACCTCATTAGGTGAAGATCATGTAGAA
GAAAATGAAAGGTGCTTGGGATAATTTTATATTCTTTAGGAGTGGAATGT
TAACCATTGCATGCTCAGTATCACAACCCTGGCAGTATAGACAAGCTGTA
AAAAAATGAAAGAAACAAAATTTATATTCATTTTTAGAAGCTAATAGCTA
TAAAAATTTAGACGCATAGAACAATATTTTTCTGGGTTGGTTTTTCCAAC
CACATATTATAAGTGCCTATTATTGTATTTTGTAGTTATTCAAAAGTTTT
ACAAACAAACAAGCAAAAATGATCTATCAGTGCTTTATAATGAGACAGTA
AGAACAGTGTACTTTGACATTTATTCATGCAGGAAAATCCAGAGGAAACA
AAATCTACATATTTCCATTCTTCCAGAGGACCTGAGCTCAGTTCTCAGCA
TCCAATCTGGCAGGTCCAACCATCTGTAACCCCTGTAATAAGATGTCTGA
TGCTCTTTTCTGGTCTCTGTGGATATCCACACATGGGTAGCATACACATC
TGTCAATACACACATACACACTGGGAAATAACCTTAAATCTTCTGNCAGC

CCATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCCGAGGAATAGCGAAAGGCTGAG
AAGCACCTGAGAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAAT
CAAAACAACCCTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGATCA
AAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACA
CTCCTCCCTTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATC
AGTCTGGCGGTTCCTCAGAAAATTGGAAATAGTACTACTGGACGATCCCG
CAATATCTCTCCTGGGCGTATATCCAGAAGATGTCCCAACTGGTAAGAAA
TACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAG
ATGGAAAGAACCCAGATGCCCTTCAACAGAGGAATGGATACAGAAAATGT
GGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
ATGAAATTCCTAGGCAAATTGATTGACCTGGAGGGCATCATCCTGAGTGA
TGTAATCCAATCACAAAAGAACTCACATGATATGTACTCACTGAGAAGTG
GATATTAGCCCAGAAACTTAGTATAGCGAGATATAAGGTACAATATGCAA
AACACATGANACTGAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCTC
CTTCTT

Query= MSMg01no540_b22.b1 MSMg01no540_b22.b1 CHROMAT_FILE:
MSMg01no540_b22.b1 PHD_FILE: MSMg01no540_b22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:17 2005
         (665 letters)



>mm_chr14_101334402_101335465
          Length = 1064

 Score = 1241 bits (642), Expect = 0.0
 Identities = 657/662 (99%), Gaps = 3/662 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagccatagctagtaacctagaatgtcatctattctctgatttgtatttttctgc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gaattcagccatagctagtaacctagaatgtcatctattctctgatttgtatttttctgc 663

                                                                       
Query: 65  taccctcttttaaaaaatccacttgtggccattaggagtaggaagttgggactatttggg 124
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 662 taccctcttttaaaaaatccacttgtggccattaggagtaggaagtt-ggactatttggg 604

                                                                       
Query: 125 gctcacctcattaggtgaagatcatgtagaag-aaaatgaaaggtgcttgggataatttt 183
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 603 gctcacctcattaggtgaagatcatgtagaagaaaaatgaaaggtgcttgggataatttt 544

                                                                       
Query: 184 atattctttaggagtggaatgttaaccattgcatgctcagtatcacaaccctggcagtat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 atattctttaggagtggaatgttaaccattgcatgctcagtatcacaaccctggcagtat 484

                                                                       
Query: 244 agacaagctgtaaaaaaatgaaagaaacaaaatttatattcatttttagaagctaatagc 303
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 agacaagctgt-aaaaaatgaaagaaacaaaatttatattcatttttagaagctaatagc 425

                                                                       
Query: 304 tataaaaatttagacgcatagaacaatatttttctgggttggtttttccaaccacatatt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tataaaaatttagacgcatagaacaatatttttctgggttggtttttccaaccacatatt 365

                                                                       
Query: 364 ataagtgcctattattgtattttgtagttattcaaaagttttacaaacaaacaagcaaaa 423
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ataagtgcctattattttattttgtagttattcaaaagttttacaaacaaacaagcaaaa 305

                                                                       
Query: 424 atgatctatcagtgctttataatgagacagtaagaacagtgtactttgacatttattcat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atgatctatcagtgctttataatgagacagtaagaacagtgtactttgacatttattcat 245

                                                                       
Query: 484 gcaggaaaatccagaggaaacaaaatctacatatttccattcttccagaggacctgagct 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gcaggaaaatccagaggaaacaaaatctacatatttccattcttccagaggacctgagct 185

                                                                       
Query: 544 cagttctcagcatccaatctggcaggtccaaccatctgtaacccctgtaataagatgtct 603
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 184 cagttctcagcatccaatctggcaggtccaatcatctgtaacccctgtaataagatgtct 125

                                                                       
Query: 604 gatgctcttttctggtctctgtggatatccacacatgggtagcatacacatctgtcaata 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gatgctcttttctggtctctgtggatatccacacatgggtagcatacacatctgtcaata 65

             
Query: 664 ca 665
           ||
Sbjct: 64  ca 63


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1064
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1054
Effective search space:   690370
Effective search space used:   690370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)