Query= MSMg01no543_c23.b1 MSMg01no543_c23.b1 CHROMAT_FILE:
MSMg01no543_c23.b1 PHD_FILE: MSMg01no543_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:28 2005
(611 letters)
>mm_chr14_23476188_23477198
Length = 1011
Score = 1083 bits (560), Expect = 0.0
Identities = 596/608 (98%), Gaps = 2/608 (0%)
Strand = Plus / Minus
Query: 5 gaattcagttgaatatctacaggattacatctactatagcaccaaatatgaggtgtataa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 gaattcagttgaatatctacaggattacatctactatagcaccaaatatgaggtgtataa 752
Query: 65 gaagatggcatgctttcaagaaatttacaatccatgcaggggatggaaagtctgaacaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gaagatggcatgctttcaagaaatttacaatccatgcaggggatggaaagtctgaacaat 692
Query: 125 tgattggaacatataaactctggtcactgccactgcctgagccaagattctgcaccttaa 184
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 691 taattggaacatataaactctggtcactaccactgcctgagccaagattctgcaccttaa 632
Query: 185 taggcaacaaccatgggcactccagagagctacaacacaatctccttctcatggaaaggg 244
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 631 taggcaacaaccatgggcactccagagagctaaaacactatctccttctcatggaaaggg 572
Query: 245 ttcccttcaggttccactgtcgctctgacttaaagtttcataggtatagaatagtaggca 304
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ttcccttcaggttccactgtcactctgacttaaagtttcataggtatagaatagtaggca 512
Query: 305 gaaacattatcgaccataacagtattgagggcaagcccactaaatagcaatcagtctcct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gaaacattatcgaccataacagtattgagggcaagcccactaaatagcaatcagtctcct 452
Query: 365 ttctcattaaaccatctcagaaaggtatcagtactgtccccaaggtcttgaggcagatcc 424
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 451 ttctcattaagccatctcagaaaggtattagtactgtccccaaggtcttgaggcagatcc 392
Query: 425 aattcaagccagtaatgtcaactgtgggggtcttttgtcatttcacagacaatat-cagg 483
||||||||||||||||||||||||||||||||||| ||||||| ||||||||| | ||||
Sbjct: 391 aattcaagccagtaatgtcaactgtgggggtctttcgtcattttacagacaat-tgcagg 333
Query: 484 actgtaccaggaacggttaaacaaaaccaaaagcatgatctgaatagattctaattttct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 actgtaccaggaacggttaaacaaaaccaaaagcatgatctgaatagattctaattttct 273
Query: 544 tgaaactcctatttaatcatagagaaacacatccaaatttgggggtcctctggactattt 603
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 272 tgaaactcctatttaatcatagagaaacacatccaaatttggggatcctctggactattt 213
Query: 604 tataagat 611
||||||||
Sbjct: 212 tataagat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no543_c23.g1 MSMg01no543_c23.g1 CHROMAT_FILE:
MSMg01no543_c23.g1 PHD_FILE: MSMg01no543_c23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:28 2005
(594 letters)
>mm_chr14_23427185_23428178
Length = 994
Score = 1094 bits (566), Expect = 0.0
Identities = 587/594 (98%)
Strand = Plus / Plus
Query: 1 tcacagtgctagaattccaagcttggtgtagtagcatggcttggttcaggagctgactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacagtgctagaattccaagcttggtgtagtagcatggcttggttcaggagctgactct 260
Query: 61 cttactcctaaggtctaggtatggagaaaaccaaaaggatatcttttctgttcttataga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttactcctaaggtctaggtatggagaaaaccaaaaggatatcttttctgttcttataga 320
Query: 121 ccacatgaccacggcctcatttaaccttaatgatctcctggggggctaggttggatttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacatgaccacggcctcatttaaccttaatgatctcctggggggctaggttggatttta 380
Query: 181 agatttcaacaaataaatttgaataggacacattgcagccccaaatggagagagcccagt 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 agatttcaacaaataaatttgaataggacacattgcagctccaaatggagagagcccagt 440
Query: 241 ctcttctcccaccctgcctcactgagttttctaagatttgtgctttaggcaataatttga 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 ctcttctcccaccctgcctcactgagttttctaagatttatgctttaggcaataatttga 500
Query: 301 aaggctttaactaagcatgtattcgctgaatatgaaaggagaaaagaagaccatacattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggctttaactaagcatgtattcgctgaatatgaaaggagaaaagaagaccatacattc 560
Query: 361 ttcccagggaggtctcagctcctgaatttgggagtcttgtaacacagagcaaagccattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcccagggaggtctcagctcctgaatttgggagtcttgtaacacagagcaaagccattt 620
Query: 421 attccacaggaattgtggagacagggatccaagcccaaggaagcattcaagggttagtgt 480
|||||||||||||||| |||| ||||||||| ||||||| |||||||||||| |||||||
Sbjct: 621 attccacaggaattgtagagagagggatccaggcccaagaaagcattcaaggtttagtgt 680
Query: 481 agaacagacaaaggaagagggtccagggtcacagatacacttgagaggacaacaggacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaacagacaaaggaagagggtccagggtcacagatacacttgagaggacaacaggacac 740
Query: 541 agtcctggtagacaggacagctgtggtggaggcttctcacagcctcatctcagc 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtcctggtagacaggacagctgtggtggaggcttctcacagcctcatctcagc 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
