Query= MSMg01no543_m10.b1 MSMg01no543_m10.b1 CHROMAT_FILE:
MSMg01no543_m10.b1 PHD_FILE: MSMg01no543_m10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:14 2005
(626 letters)
>mm_chr14_73722699_73723724
Length = 1026
Score = 1174 bits (607), Expect = 0.0
Identities = 622/627 (99%), Gaps = 2/627 (0%)
Strand = Plus / Minus
Query: 1 tctcctttaaattaaactttacaagacatagtctcatcttggttactcattgccac-aga 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 826 tctcctttaaattaaactttacaagacatagtctcatcttggttactcattgccacta-a 768
Query: 60 ggttctcaaaaagcacttacagttgatctctgacttacctattgtcacgtgtgttcacca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 ggttctcaaaaagcacttacagttgatctctgacttacctattgtcacgtgtgttcacca 708
Query: 120 tagggatttgctacctcttctgaactgccattaaatgaatgttgtgtgatcattggagaa 179
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 707 tagggatttgctacctcttctgaactgccattaaatgaatgttgtgttatcattggagaa 648
Query: 180 tacacttagacaaacactgatgatatatagattagtcactgtgctgtcttgctacaatca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tacacttagacaaacactgatgatatatagattagtcactgtgctgtcttgctacaatca 588
Query: 240 agagaagtggtaaacactacagatacaaagctgctgccagtataacaaaacatgctgcta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 agagaagtggtaaacactacagatacaaagctgctgccagtataacaaaacatgctgcta 528
Query: 300 tgcagtaaactttatctcttaattatagaaatatgctgaaaaataatgataaagctatag 359
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tgcagtaaactttatcttttaattatagaaatatgctgaaaaataatgataaagctatag 468
Query: 360 tttagtaaacacacaagccagtaacataatggcttcaggcattgtatgtccttgtatata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tttagtaaacacacaagccagtaacataatggcttcaggcattgtatgtccttgtatata 408
Query: 420 tgattctctcctaccagtggcagcttgcttacagcagcatctccctaactgcacaagtag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tgattctctcctaccagtggcagcttgcttacagcagcatctccctaactgcacaagtag 348
Query: 480 caaatggattgtgccacaatgttatgctggttaagatgggctctaagtgatgttcctgca 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 347 caaatggattgtgccacaatgttatgctggttaagatgggctctaagtgatgtttctgca 288
Query: 540 ccattataatcttacaggactactgttgtaaactgccttactgagtgacacatcatgtag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ccattataatcttacaggactactgttgtaaactgccttactgagtgacacatcatgtag 228
Query: 600 tgtatgcctgttcttagcaaggataag 626
|||||||||||||||||||||||||||
Sbjct: 227 tgtatgcctgttcttagcaaggataag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no543_m10.g1 MSMg01no543_m10.g1 CHROMAT_FILE:
MSMg01no543_m10.g1 PHD_FILE: MSMg01no543_m10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:15 2005
(507 letters)
>mm_chr14_73531593_73532499
Length = 907
Score = 915 bits (473), Expect = 0.0
Identities = 495/507 (97%), Gaps = 8/507 (1%)
Strand = Plus / Plus
Query: 1 tcctttccttcagagctttgattttcagctaaaactgagagtggcgatgagatcagccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctttccttcagagctttgattttcagctaaaactgagagtggcgatgagatcagccgg 260
Query: 61 cttccggacagctacagatgaccacaggactccccccttccaccgccttacttcagttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttccggacagctacagatgaccacaggactccccccttccaccgccttacttcagttca 320
Query: 121 gttcttacgaggcagcctgctaccggctgttggtgtgaagagaagacagggacagaaagt 180
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 321 gttcttacgaggcagcctgctaccggctgttggcgcgaagagaagacagggacagaaagt 380
Query: 181 aaacatttttaggcaaaccaaccaataagtctgcagatctggcaacaaaatcagcgttca 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 aaacatttttaggcaaaccaacc--------tgcagatctggcaacaaaatcagcgttcg 432
Query: 241 tcacttaaaatatgtgttgcgaaagtctcagtcatttctgggaaattctgtggagtagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcacttaaaatatgtgttgcgaaagtctcagtcatttctgggaaattctgtggagtagcc 492
Query: 301 attccaaacttactttaaatggcgattgagattggaaaattcacactctcttgcgtcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 attccaaacttactttaaatggcgattgagattggaaaattcacactctcttgcgtcttc 552
Query: 361 tctgtattctcatggttagcaacctatgcatgagttggttagagctgggctcttgctctt 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tctgtattctcgtggttagcaacctatgcatgagttggttagagctgggctcttgctctt 612
Query: 421 tgggattctgcagggagagtgccacagcaccacaggatagggaattcatttctccattat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tgggattctgcagggagagtgccacagcaccacaggatagggaattcatttctccattat 672
Query: 481 ttctcttcattgcttaaacaaacaaac 507
|||||||||||||||||||||||||||
Sbjct: 673 ttctcttcattgcttaaacaaacaaac 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
