CCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAATTCACTCTCTTGTAGTAAATATATTTTAAAAAGATGTATATGGA
TATTTTACTAATATTAAAACTATTAAAATTGTATAATTTATTAGACAGTG
TTACAAAGATGTAAAAACTAAACCTGATCAATGTATATAACAACTCTTTG
GTTTCATTGTCCAAGTTGTTCATGCATTGTTTTCTGTCTAATTTGTTGAG
GTTTATTAAAAAGGTATTTTCTTTTTTGTTTGAAGTTTTGCAAATTAAGT
CCAGATCTTTCAGTATTGTTGGCAAATTCTCTGCTACTAAATGATACTCT
AACTTCTTTAGCAATCTTCCTAGAGGATATAAATATGCGAAGGTTAGCAG
CTTTGTGATGAACACTTTATTTATTTAATTATCCCTACAGACTATCATGC
CAGGGCCTCATGAGTGTTGGGCAGATATTACCTTAGTGAACCATTTTCCA
AGAATGTCCTGTCTGTTTCTTTCTCAATCATGTTCTGATACTGTGTATCA
GAAATCAAATGTTGTTGAAATGCAATACTAGGGCCTCTCTTGATTTTTTT
TTTTTTATTTTCTTACCATCCTCTGCTGCATCATTTTGACGTTGTTCCTT
CCTCCTCCTGGTTCTTATTCATCTTCTTTCTGGACTCCCGTCTTTGGTAG
TTAAAGAACTCACATGTCATGTGACAGAATGTCACATAAAATAAATGCAT
TCACTATAC

CCCACAATACATAGCACGCCAACGCAGGGACGACAATTTTCCCACAAAAN
GGAGGGAGAACGTCCGTGGAGTTTCCCCACACAATCGACTCGGTCCAAGT
CACGCTGGCAGCCCGTTGCCTTCAGACTCTTATTCGTATGAACACACAAT
AGAGATGCGAGTCTCGATGCCCTGCTGAGGAGACCCAATAAACTACTTGT
CGCTACGTCCACGAGTCGCACATCACCCTATCCCAGTCTCACTCCGTCGC
GAGCGTAACTCGTCATCTACTTTACCGCGCCCACGCCGTCATTACCCCTG
CCTACAAGTAATCGCAGTAGTGCATGGACACGTGCTTGCCTGCATCGCAG
GACACACAGTAACCTGAAGCTGGGCGAGACTATGACACGGCATCCAGAGA
GAACGAACCTCAGTACTCAAGTAGCAGAACTAGATATAGCTAGGAGGATG
AGTAAGAGTCGCGCGTACGAACCCGTGAACACCTTCTCTCGGATCGCATC
CCACCACCAGCCGTCGTGCAAGTGAGAAAGTAGAGCACCGATAATCTCGT
TCATTAAATACCATCAAGTGCCACTCATCATAATCACTATACATCGCCGC
TCGGACATCGACTATTCGTCTTCGCTTATCACCGCGCTACGGTACACACT
ACAAACTCAGCATTCAACACCGGAGGAAGAGAGGAGACGCATGTGTACGG
AGTAAGCTGCGGTATCCCGCCAATAAACACGTCCGCCTCGTACCTTCCAA
TCGTCTTGTCGAGTACATAGCGTACCACATTCGGTCCCCTCCTTTCCGAT
ATGCCACTCATCTTTATCCTTCCCGCTCACCTCACTGCTGTCGCCGATCA
CTCTTGGATACCATCCAATCCGTACGCACCCTCCTCTATACCTTCCTCAT
TTCACTCACCCTTGCTCCGTATCATCGAGAAGTCAACGTTCTT

Query= MSMg01no543_o14.b1 MSMg01no543_o14.b1 CHROMAT_FILE:
MSMg01no543_o14.b1 PHD_FILE: MSMg01no543_o14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:25 2005
         (677 letters)



>mm_chr14_110625943_110627021
          Length = 1079

 Score = 1195 bits (618), Expect = 0.0
 Identities = 661/676 (97%), Gaps = 2/676 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaattcactctcttgtagtaaatatattttaaaaagatgtatatggatatttta 63
           |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 204 ggaatttaattcactctcttgtagtaaatatatttttaaaagatgtatatggatatttta 263

                                                                       
Query: 64  ctaatattaaaactattaaaattgtataatttattagacagtgttacaaagatgtaaaaa 123
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 264 ctaatattaaaactattaaaattgtataatttattagacagtgttccaaagatgtaaaaa 323

                                                                       
Query: 124 ctaaacctgatcaatgtatataacaactctttggtttcattgtccaagttgttcatgcat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctaaacctgatcaatgtatataacaactctttggtttcattgtccaagttgttcatgcat 383

                                                                       
Query: 184 tgttttctgtctaatttgttgaggtttattaaaaaggtattttcttttttgtttgaagtt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgttttctgtctaatttgttgaggtttattaaaaaggtattttcttttttgtttgaagtt 443

                                                                       
Query: 244 ttgcaaattaagtccagatctttcagtattgttggcaaattctctgctactaaatgatac 303
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 444 ttgcaaattaagtccagatctttcagtattgttggcaaattctctgctactagatgatac 503

                                                                       
Query: 304 tctaacttctttagcaatcttcctagaggatataaatatgcgaaggttagcagctttgtg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tctaacttctttagcaatcttcctagaggatataaatatgcgaaggttagcagctttgtg 563

                                                                       
Query: 364 atgaacactttatttatttaattatccctacagactatcatgccagggcctcatgagtgt 423
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| 
Sbjct: 564 atgaacactttatttatttaattatccttacagactatcatgccagggcctcatgagtgc 623

                                                                       
Query: 424 tgggcagatattaccttagtgaaccattttccaagaatgtcctgtctgtttctttctcaa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgggcagatattaccttagtgaaccattttccaagaatgtcctgtctgtttctttctcaa 683

                                                                       
Query: 484 tcatgttctgatactgtgtatcagaaatcaaatgttgttgaaatgcaatactagggcctc 543
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcatcttctgatactgtgtatcagaaatcaaatgttgttgaaatgcaatactagggcctc 743

                                                                       
Query: 544 tcttgattttttttttttt--attttcttaccatcctctgctgcatcattttgacgttgt 601
           |||||||||||||||||||  |||||||||| |||||||| |||| ||||||||| ||||
Sbjct: 744 tcttgatttttttttttttttattttcttactatcctctgatgcaccattttgacattgt 803

                                                                       
Query: 602 tccttcctcctcctggttcttattcatcttctttctggactcccgtctttggtagttaaa 661
           ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 804 tccttcctcctcctggttcttattcatcttctttctggactcctgtctttagtagttaaa 863

                           
Query: 662 gaactcacatgtcatg 677
           ||||||||||||||||
Sbjct: 864 gaactcacatgtcatg 879


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1079
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1069
Effective search space:   713023
Effective search space used:   713023
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)