Query= MSMg01no545_c01.b1 MSMg01no545_c01.b1 CHROMAT_FILE:
MSMg01no545_c01.b1 PHD_FILE: MSMg01no545_c01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:01 2005
(561 letters)
>mm_chr14_8641791_8642749
Length = 959
Score = 988 bits (511), Expect = 0.0
Identities = 544/555 (98%), Gaps = 2/555 (0%)
Strand = Plus / Plus
Query: 7 ggaattctgtaaattgctctagagccttccagagaaaagcaactgtcccaccccaagcat 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattctgtaaattgctctagagccttccagagaaaagcaactgtcccaccccaagcat 266
Query: 67 tcctccaacttgggatggctccctcccagctgcagttctgcaactgagagacgagtgagg 126
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 267 tcctccaacttgggatggctccctcccagctgcagttctgcaattgagagacgagtgagg 326
Query: 127 ggaccaacgtgtcctctgcctgccaggtatccgtgagcaacatgaggtcatagctgggca 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ggaccaacgtgtcctctgcctgccaggtatccgtgagcaacatgaggtcatagctgggca 386
Query: 187 gctacaatctgtctgtcagctcctacccaggatctgaaggggaagagggtgtggtgctta 246
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gttacaatctgtctgtcagctcctacccaggatctgaaggggaagagggtgtggtgctta 446
Query: 247 aagatgagataaaagaccaggaaattcctagtcctgtgggagagaccaggccctattagt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aagatgagataaaagaccaggaaattcctagtcctgtgggagagaccaggccctattagt 506
Query: 307 caagactgagaaacaattccaaaaaagggaaggtccttactcatccctctgagtactgtc 366
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 caagactgagaaacaattccaaaaaagggaaggtccttactcatccctctgagtactgtt 566
Query: 367 atcaggattctgccctgttccctatatggcagccaagctgtccgctggacgccccaggtc 426
|||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 567 gtcaggactctgccctgttccctatatggcagccaagctgtccgctggatgccccaggtc 626
Query: 427 ctagagtaaagagtgtctggctgagaattctctgaaaaaaacacacatacgcacacacaa 486
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 627 ctagtgtaaagagtgtctggctgagaattctctgaaaaaa-cacacatacgcacacacaa 685
Query: 487 attctgattggcttgaatcacattccaaccccaaaccaaccaccatgaattgcagaaggg 546
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 686 attctgattggcttgaatcacattccaaccc-aaaccaaccaccatggattgcagaaggg 744
Query: 547 gttttctttttttca 561
|||||||||| ||||
Sbjct: 745 gttttcttttcttca 759
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 959
Length adjustment: 10
Effective length of query: 551
Effective length of database: 949
Effective search space: 522899
Effective search space used: 522899
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_c01.g1 MSMg01no545_c01.g1 CHROMAT_FILE:
MSMg01no545_c01.g1 PHD_FILE: MSMg01no545_c01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:01 2005
(448 letters)
>mm_chr14_8813391_8814238
Length = 848
Score = 820 bits (424), Expect = 0.0
Identities = 442/448 (98%)
Strand = Plus / Minus
Query: 1 ttagtagaaaaataggagaggctactgaggacagtgagtgcagcaatcctcttgtacatt 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ttagtagaaaaataagagaggctactgaggacagtgagtgcagcaatcctcttgtacatt 392
Query: 61 atccagtttgcttatgccaggcagggcagggagagcctccgcctgtaagcgccacttctt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 391 atccagtttgcttatgccaggcagggcagggagagcctccgcctgtaagcgccatttctt 332
Query: 121 ctcaaagggaggcaaggctctgcattgctaaacaaatctgtttttactgagcctccatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 331 ctcaaagggaggcaaggctctgcattgctaaacaaatctgtttttactgagcctccacct 272
Query: 181 tctagcttttcttacccttcctctcctgggacaaatggcttaacagtctcattcatttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tctagcttttcttacccttcctctcctgggacaaatggcttaacagtctcattcatttac 212
Query: 241 ctaatcattttaaaaaagatttatttatttattttatgtatgtgggtacactgccacagt 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ctaatcatttttaaaaagatttatttatttattttatgtatgtgggtacactgccacagt 152
Query: 301 cttcagacacaccagaaaagggcatcgtatcccattacagatggttgtgagccactatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 151 cttcagacacaccagaaaagggcatcgtatcccattacagatggttgtgagccaccatgt 92
Query: 361 ggtttctgggaattgaactcgggacctctggaagagcagtcaatgctcttaactgctgag 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 agtttctgggaattgaactcgggacctctggaagagcagtcaatgctcttaactgctgag 32
Query: 421 ccatttctccagccccacctaatcattt 448
||||||||||||||||||||||||||||
Sbjct: 31 ccatttctccagccccacctaatcattt 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
