Query= MSMg01no545_f06.b1 MSMg01no545_f06.b1 CHROMAT_FILE:
MSMg01no545_f06.b1 PHD_FILE: MSMg01no545_f06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:16 2005
(657 letters)
>mm_chr14_23953234_23954290
Length = 1057
Score = 1178 bits (609), Expect = 0.0
Identities = 643/655 (98%), Gaps = 2/655 (0%)
Strand = Plus / Plus
Query: 5 gaattctaactttattgcttcattagcatagtggcaggaaattatatttcacttttcaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctaactttattgcttcattagcatagtggcaggaaattatatttcacttttcaaa 262
Query: 65 ataagattatttgtctcttctctttaaaaaaa--tagtcaattgcttctggagagaccat 122
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 263 ataagattatttgtctcttctctttaaaaaaaaatagtcaattgcttctggagagaccat 322
Query: 123 aagcagtgctgagcccacagcatagatgtgagaaaccagcttatgagcccagacttctat 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 323 aagcagtgctgagcccacagcatagatgtgagaaaccagcttatgagcccagacttcttt 382
Query: 183 agggcaaattacactcattcccttctgccctctcagactccacagacagcatcctacctc 242
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agggcaaattgcactcattcccttctgccctctcagactccacagacagcatcctacctc 442
Query: 243 agtcagccaagaagagggccataggtgacacacagcaaagacatcctagcagatgcagct 302
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 443 agtcagccaagaagaggaccataggtgaaacacagcaaagacatcctagcagatgcagct 502
Query: 303 atttggtacaatacctctgacaaaggcaagttgagcaaaaccaatgaacttgtagggtca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atttggtacaatacctctgacaaaggcaagttgagcaaaaccaatgaacttgtagggtca 562
Query: 363 tctcctgagtgtctaaacacgagcagttaaccatgattctcaatttgatgggctctggaa 422
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 563 tctcctgagtgtctaaacatgagcagctaaccatgattctcaatttgatgggctctggaa 622
Query: 423 ttaattaattaggagacctagctctgggtgggtctagaagggcatttttttcacatagga 482
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttaattaattaggagaactagctctgggtgggtctagaagggcatttttttcacatagga 682
Query: 483 tgcattgactgagtgcagcacctttccaaatggtggtttaaacgcaaagaggcccaagga 542
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 683 tgcattgactgagtgcagcacctttccaaatggtggtttaaacacaaagagacccaagga 742
Query: 543 atagccagcactgaccacctaactttcttctttcctgagaaagtgtgcttagccctgctg 602
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 743 atagccagcactgaccacctaactttcttttttcctgagaaagtgtgcttagccctgctg 802
Query: 603 ctgttgctgtgcttcagtgaacattagtctcccacacagattgactaccagaggc 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ctgttgctgtgcttcagtgaacattagtctcccacacagattgactaccagaggc 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_f06.g1 MSMg01no545_f06.g1 CHROMAT_FILE:
MSMg01no545_f06.g1 PHD_FILE: MSMg01no545_f06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:16 2005
(521 letters)
>mm_chr14_24083810_24084730
Length = 921
Score = 706 bits (365), Expect = 0.0
Identities = 380/385 (98%)
Strand = Plus / Minus
Query: 136 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtacacatgcatgcacttgagtccagttgtcca 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtacacatgcatgcacttgagtccagttgtcca 862
Query: 196 tagagcccagaagagaatttgtatcccctgtatctagagttacaggctattgtaagtcac 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tagagcccagaagagaatttgtatcccctgtatctagagttacaggctattgtaagtcac 802
Query: 256 ctgacttggggctgggaactgaatttgggccctcgacaagagcagtttgctctctttcat 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctgacttggggctgggaactgaatttgggccctcgacaagagcagtttgctctctttcat 742
Query: 316 gattgggccatctctccagccatctacatgtaactactcttatatattgtgcattatctg 375
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gattgggccatctctttagccatctacatgtaactactcttatatattgtgcattatctg 682
Query: 376 tggctcttgaaaaaagacatgtggaatttgctttcgaaacatttatattttggctgaagg 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggctcttgaaaaaagacatgtggaatttgctttcgaaacatttatattttggctgaagg 622
Query: 436 aaatgcaatatttaaacattaagcagagccaagaatggttgtcatgactgttctgaacgg 495
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaatgcaatatttaaacattacccagagccaagaatggttgtcatgactgttctgaacgg 562
Query: 496 aagacacaggatggtcagtatccca 520
|||| ||||||||||||||||||||
Sbjct: 561 aagagacaggatggtcagtatccca 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
