Query= MSMg01no545_f21.b1 MSMg01no545_f21.b1 CHROMAT_FILE:
MSMg01no545_f21.b1 PHD_FILE: MSMg01no545_f21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:19 2005
(629 letters)
>mm_chr14_22584427_22585455
Length = 1029
Score = 1149 bits (594), Expect = 0.0
Identities = 621/630 (98%), Gaps = 2/630 (0%)
Strand = Plus / Plus
Query: 1 ccttggttatatagtgggttaaaggagatcctgtttcaaaaacaaattatatctcttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttggttatatagtgggttaaaggagatcctgtttcaaaaacaaattatatctcttttg 260
Query: 61 agttatatgaataatttagataatgatgtttacaaaaccctaccctcagtttagaattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttatatgaataatttagataatgatgtttacaaaaccctaccctcagtttagaattaa 320
Query: 121 attatctttaaaaaaataaaacagacttcaagttagatttattttaaccttttttttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attatctttaaaaaaataaaacagacttcaagttagatttattttaaccttttttttttt 380
Query: 181 -catttcacaaagatagatagatagacagacatagaaacatatcatctcagaggttggag 239
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 tcatttcacaaagatagatagatagacagacatagaaacatatcatcccagaggttggag 440
Query: 240 aaatgactcttacaggtagggtgcttgctgcacaagtctggaggacctgtggtggagggc 299
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatg-ctcttacaggtagggtgcttgctgcacaagtctggaggacctgtggtggagggc 499
Query: 300 acctgtaacctcagcattacactgttgcgagtggagacaggatgggttactggggcttac 359
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 500 acctgtaacctcagcgttacactgttgcgagtggaggcaggatgggttactggggcttac 559
Query: 360 tgaccaccatcttagtttagtgagaacaagatgggaagtgatagagcaggctatctatct 419
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 560 tgaccaccatctcagtttagtgagaacaagatgggaagtgatagagcaggctatctacct 619
Query: 420 ctgtgatggagcaggacatctctgcacacacagttgcatgtacctcccctccccccaaca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctgtgatggagcaggacatctctgcacacacagttgcatgtacctcccctccccccaaca 679
Query: 480 agtaaataaatgcattctagaaaatatatcggactcaagctgagcatggtggtgctcact 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agtaaataaatgcattctagaaaatatatcggactcaagctgagcatggtggtgctcact 739
Query: 540 agtaatcctcaatgtggagctcatcttgggctcctagtgaggcctgattcaaacaaccaa 599
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 740 agtactcctcaatgtggagctcatcttgggctcctagtgaggcctgattcaaacaaccga 799
Query: 600 gggtggcagggattgaactctgaactctta 629
||||||||||||||||||||||||||||||
Sbjct: 800 gggtggcagggattgaactctgaactctta 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_f21.g1 MSMg01no545_f21.g1 CHROMAT_FILE:
MSMg01no545_f21.g1 PHD_FILE: MSMg01no545_f21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:19 2005
(573 letters)
>mm_chr14_22708510_22709482
Length = 973
Score = 942 bits (487), Expect = 0.0
Identities = 523/545 (95%), Gaps = 17/545 (3%)
Strand = Plus / Minus
Query: 1 tctggaa-aagctgagcctccccctagcatcacaggtgctagggataagggaccacttat 59
||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 529 tctggaacaagctgagcctccccctagcatcaca----------------gaccacttat 486
Query: 60 cttcccatcagaggatctcagaagccgagtcaggagatacctgtgggatgtgagacatga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cttcccatcagaggatctcagaagccgagtcaggagatacctgtgggatgtgagacatga 426
Query: 120 cagagcaagggcttctccagcctgcttctcatcaccacagatgggagataagccacattg 179
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 425 cagagcaagggcttctccagcctgcttctcatcaccacagatgggggataagccacattg 366
Query: 180 cttctacctccacatcagccatacaacccacagtgagcagccaccctatttcctataaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cttctacctccacatcagccatacaacccacagtgagcagccaccctatttcctataaat 306
Query: 240 ggacttagggacgtaacaggatgaatcttgcttttttattgttgtttacattactttgta 299
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggacttagagacgtaacaggacgaatcttgcttttttattgttgtttacattactttgta 246
Query: 300 tgtgtgtgcatgtaccatgatacgtatgcgacgtcagaggacaacttatgggagtgtgct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tgtgtgtgcatgtaccatgatacgtatgcgacgtcagaggacaacttatgggagtgtgct 186
Query: 360 gcctcctgtcacaaaggtcctggtgatagaattcaggtcctctgactttctggcaagtgc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gcctcctgtcacaaaggtcctggtgatagaattcaggtcctctgactttctggcaagtgc 126
Query: 420 ctttaccccctgggccctcttctcttgctagcccacttcttggaggtggggaaataggtc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ctttaccccctgggccctcttctcttgctagcccacttcttggaggtggggaaataggtc 66
Query: 480 attcagtagtgttgaccttgaaggcatgagatcctgagttagatcccaagcttaaaaaga 539
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 agtcagtagtattgaccttgaaggcatgagatcctgagttagatcccaagcttaaaaaga 6
Query: 540 caggc 544
|||||
Sbjct: 5 caggc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
