Query= MSMg01no545_l06.b1 MSMg01no545_l06.b1 CHROMAT_FILE:
MSMg01no545_l06.b1 PHD_FILE: MSMg01no545_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:45 2005
(645 letters)
>mm_chr14_70697649_70698698
Length = 1050
Score = 994 bits (514), Expect = 0.0
Identities = 597/644 (92%), Gaps = 36/644 (5%)
Strand = Plus / Minus
Query: 33 gatgtgtttacttatagatgctaataaggaaaaaacaagccaggcatggtggcacacgcc 92
||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 1050 gatgtgtttacttatagatgctaat---gaaaaaacaagccaggcatggtggtgcacgcc 994
Query: 93 tttaatcccagcacttgggaggcagaggcaggctgatttctgagttcgaggtcagcctgg 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 tttaatcccagcacttgggaggcagaggcaggctgatttctgagttcgaggtcagcctgg 934
Query: 153 tctacaaagtgagttccaggacagccaaggctatacagagaaatcctgtctc-------- 204
||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 933 tctacaaagtgagttccaggacagccagggctatacagagaaaccctgtctcgaaaaacc 874
Query: 205 ----------------aaaaaaaaaggaagaaac--at-tttttgtttcat---ttccca 242
|||||||||||||||||| || |||||||||||| ||||||
Sbjct: 873 aaaaaaaaaaaaaaaaaaaaaaaaaggaagaaacaaatatttttgtttcatttcttccca 814
Query: 243 aagtgagagattctttcaagtgtcccacaactgtctgcttttttaaaaaattatctctac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 aagtgagagattctttcaagtgtcccacaactgtctgcttttttaaaaaattatctctac 754
Query: 303 tcattgtatgaagttgtgtatttcatggagatgctatgatacatatatatatatatataa 362
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 753 tcattgtatgaagttgtgtatttcatggagatgctatgatac--atatatatatatataa 696
Query: 363 tctgctttgatcatacctgtcctctcctgctccctataactgcaggtccacaagtggact 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tctgctttgatcatacctgtcctctcctgctccctataactgcaggtccacaagtggact 636
Query: 423 cttttaagctgtggtctgatggtgtcctgtacacaagtcccaagtcacagtgtctaacag 482
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 635 cttttaagctgtggtctgatggtgtcctatacacaagtcccaagtcacagtgtctaacgg 576
Query: 483 aaggcccagtaatacacactctggcgttggttcttgccccttattttgaaaatgaatgaa 542
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 575 aaggcccagtaatacacgctctggtgttggttcttgccccttattttgaaaatgaatgaa 516
Query: 543 cactgaacgacttaaagttttctttcctaggaatgatgatggtttatttatttggga-tt 601
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 515 cactgaaagacttaaagttttctttcctaggaatgatgatggtttatttatttgggattt 456
Query: 602 ttttttaagggtgggggtacccgtgcatggtgtgtgtttataag 645
|||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 455 tttttttagggtgggggcacccgtgcatggtgtgtgtttataag 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1050
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1040
Effective search space: 660400
Effective search space used: 660400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_l06.g1 MSMg01no545_l06.g1 CHROMAT_FILE:
MSMg01no545_l06.g1 PHD_FILE: MSMg01no545_l06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:45 2005
(654 letters)
>mm_chr14_70646925_70647978
Length = 1054
Score = 1257 bits (650), Expect = 0.0
Identities = 653/654 (99%)
Strand = Plus / Plus
Query: 1 gagaattatagaaagaaaccctgtttcaaaaaacgaaacaaaactttaatttttaaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagaattatagaaagaaaccctgtttcaaaaaacgaaacaaaactttaatttttaaaaag 260
Query: 61 agaaagaatgtttctccaagtgttactaacagctctctgacagtgacaagattatgagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaagaatgtttctccaagtgttactaacagctctctgacagtgacaagattatgagtc 320
Query: 121 agtcccgtatttctacctctgactgtattttcatttaacctcagcaattgctatatgtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtcccgtatttctacctctgactgtattttcatttaacctcagcaattgctatatgtta 380
Query: 181 tataggtagtcactggctaagataaagaacaaaaatttaaaagcacactctatgaaaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tataggtagtcactggctaagataaagaacaaaaatttaaaagcacactctatgaaaata 440
Query: 241 gtaaaaagttacttactttcctaatgtcctctaaacaagtaatttcaggagacattcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtaaaaagttacttactttcctaatgtcctctaaacaagtaatttcaggagacattcctc 500
Query: 301 catgtacacagagaaactgctggtttaagagggcagcaagaggaagacagtcgaaagtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catgtacacagagaaactgctggtttaagagggcagcaagaggaagacagtcgaaagtgt 560
Query: 361 gcatgcacgcatcgtacaccatctctgaatacttgatccgacctacccaaagaggacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcatgcacgcatcgtacaccatctctgaatacttgatccgacctacccaaagaggacaaa 620
Query: 421 gtcaggggatgaacagtgccatactgaagagactaaccaggtgaagccagctcggaagcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtcaggggatgaacagtgccatactgaagagactaaccaggtgaagccagctcggaagcc 680
Query: 481 actggttacaggcaagtctgaagaccctgtcccagagaaaatgtccttttagagttgcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actggttacaggcaagtctgaagaccctgtcccagagaaaatgtccttttagagttgcac 740
Query: 541 acaagggctaaccgaacactcttccctttctaaagataagtatgaccttagattaacttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acaagggctaaccgaacactcttccctttctaaagataagtatgaccttagattaacttt 800
Query: 601 ctagctctgttgcccaggaaatctgataaggcaagtggctgcccatgtcttatt 654
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 801 ctagctctgttgcccaggaaatctgataaggcaggtggctgcccatgtcttatt 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
