Query= MSMg01no547_a22.b1 MSMg01no547_a22.b1 CHROMAT_FILE:
MSMg01no547_a22.b1 PHD_FILE: MSMg01no547_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:34 2005
(693 letters)
>mm_chr14_23071790_23072882
Length = 1093
Score = 1272 bits (658), Expect = 0.0
Identities = 680/690 (98%), Gaps = 6/690 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttgatggaatagaactcagttttcaaaaatgtttgaaattacagcttgacct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 ggaattctttgatggaatagaactcagttttcaaaaatgtttgaaattacagcttgacct 861
Query: 64 ggtagctcatgcctataatcccagaatccaagaggccaaagcagaaatagtgtccaagaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 ggtagctcatgcctataatcccagaatccaagaggccaaagcagaaatagtgtccaagaa 801
Query: 124 ttcaaggccaccttgagatacatagtaaattccaggccaacacaatctatagagtgagac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ttcaaggccaccttgagatacatagtaaattccaggccaacacaatctatagagtgagac 741
Query: 184 cctgcctcagacaaatacagacggggaacaagaagtcagtatatacaatcttgtgttaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cctgcctcagacaaatacagacggggaacaagaagtcagtatatacaatcttgtgttaca 681
Query: 244 acaaaaagacaagacacaaactggggtgttagctcccatttcaacacaaggcattatgat 303
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 680 acaaaaagacaagacacaaactggggtgttagctcccatttcaacagaaggcattatgat 621
Query: 304 tctgagaaaagacagatgtgtacaaataaaaatatgtatgcggcagaaataaaagataat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tctgagaaaagacagatgtgtacaaataaaaatatgtatgcggcagaaataaaagataat 561
Query: 364 tcttcatatctttctgtctgtttgatatacttcctctggttgtatttcagagtcctatgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcttcatatctttctgtctgtttgatatacttcctctggttgtatttcagagtcctatgt 501
Query: 424 caattaaaaatatttcaaatgggctggagctcaggggatggagggtcagataaattttgt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caattaaaaatatttcaaatgggctggagctcaggggatggagggtcagataaattttgt 441
Query: 484 tgtacaaggacaggtagataaatagaatgaactcaggttgcaaaacaaaaaaaacaaaac 543
| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 440 tatacaaggacaggtagataaatagaatgaactcaggttgcaaaacaaaaaaaa----ac 385
Query: 544 aaaaaacaaaaaaaaaccctccatgataagaggatgatgaaggcgggcagagggtctaca 603
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 384 aaaa--caaaaaaaaaccctccatgataagaggatgatgaaggtgggcagagggtctaca 327
Query: 604 tctgcttaatgtgctgaaggccagactctgaagaaataactatagaaacgccaccccacc 663
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 326 tctgcttaatgtgctgaaggccagactctgaagaaataactatagaaacgccacccaacc 267
Query: 664 tactgggtcttgctcaagattctcctgtga 693
||||||||||||||||||||||||||||||
Sbjct: 266 tactgggtcttgctcaagattctcctgtga 237
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space: 739689
Effective search space used: 739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_a22.g1 MSMg01no547_a22.g1 CHROMAT_FILE:
MSMg01no547_a22.g1 PHD_FILE: MSMg01no547_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:34 2005
(605 letters)
>mm_chr14_22942006_22943010
Length = 1005
Score = 1147 bits (593), Expect = 0.0
Identities = 602/605 (99%)
Strand = Plus / Plus
Query: 1 agaaggttaagacaggagaacttctcatttggggtcagcttggcctaaatggtaagacat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 agaaggttaagacaggagaacttctcatttggggtcagcttggcctaaatggcgagacat 260
Query: 61 gtttctagggaaagaatttcagcagagaatcaatggataatgtgcgtctaaaaatcaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttctagggaaagaatttcagcagagaatcaatggataatgtgcgtctaaaaatcaaaa 320
Query: 121 tgtgcagcagcagcagcaacaacaacaacagtagcagcaacaacaacaacagtagtaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgcagcagcagcagcaacaacaacaacagtagcagcaacaacaacaacagtagtaaca 380
Query: 181 gcaacaacagcagcagcaaattcactgaatcagcccgtggtacagtggagatgatagagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcaacaacagcagcagcaaattcactgaatcagcccgtggtacagtggagatgatagagt 440
Query: 241 aagggcagggagttagagtcattccttagagtgagggaaataatgaaaataatatgaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagggcagggagttagagtcattccttagagtgagggaaataatgaaaataatatgaaga 500
Query: 301 gaagcataggaggggagctcaggagtgggctgtatcaggagcccactatgttctaataca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagcataggaggggagctcaggagtgggctgtatcaggagcccactatgttctaataca 560
Query: 361 aatgacagcactcaaattccataaagacatgtgacagaatggagggacagactgaagaca 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 aatgacagcactcaaattccataaagacaggtgacagaatggagggacagactgaagaca 620
Query: 421 taacagctcataatgcctcaaacttggaaaatgacacacactgattgattcaaaagttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taacagctcataatgcctcaaacttggaaaatgacacacactgattgattcaaaagttca 680
Query: 481 aggaccatgaaagcaggattaatttagagaaaataagagtctggagatatagggtggtgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggaccatgaaagcaggattaatttagagaaaataagagtctggagatatagggtggtgg 740
Query: 541 tctagctggcatagggctctgacctcaatctccagagtgtgcaagcacacacacacacac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctagctggcatagggctctgacctcaatctccagagtgtgcaagcacacacacacacac 800
Query: 601 acaca 605
|||||
Sbjct: 801 acaca 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
