GACCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGGATCCGC
GGAATTCTTTGTGAGGCTGCGCTATTACTTCTTATTAAAGGCCAAGCACA
GGCTGCTCAGCCTGAGTACTACTGGCATTTCAAGCTGAATAATATATTGC
ATAGGAACTGTAGTGTACTTTTTAAGGTGTTTAGCAGCATCCTGCCGTCT
ACCTCCTGGCTGCTGCTGCTGGTGCCTCCTGTCCATTCGTGACAACCAAA
AATGCCTCTAGTCAGCAGCCACATATCTGAGCAGAAAGAGGGTGGGAGGT
GGGTACTCCTAGTGAGTACCCCTGATGTGAAGGATACCAAGTACAGGTTA
CCCCACTTGATGTACTGTCGGGCTGCCACTCAGGCAGCCCCAAGAAGGCA
GGGGAGAGAGTTGGTCTCAGGGAGCCTTTGCGTTGTGCCAGCTTTACTGT
TTGATCCTTTCCTCATGCCCTGGATGCTTTTCCTCCAACCTAAAGAAAAT
TGAAACGACTGTTCATCTTTTCCCAGACAGCAAAACACATTGTTTGCCTT
AAGTAATTATTGAATAAATCATCATGAGTAAGGCTGTGTGTGGACGCTCT
AATCTATCAAGAAATCATCTGGGCAGGATAATCAGTCTTGTTAGACATGT
GTTTGAAAGCACAGAGATGAAAGTCGCCCCANGATGTAACTCATTCCTAC
ACTGAAGGTGCGGAGGAAACCCTAATGCCCTATTCN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTGCAGATGAGGACCTTTCTTGAGTCAG
AGTCTCATGTAGTTTAGAATGGCGTTGGGTAAAACATATCACTGAAGCTG
ACCTGAACTCCTAATCCTTCTGCCTCTACCTCCCAAGTGTTGGGATTACA
AGCATGTACCATCACACAAAGTTAAGACTTATGGGGGTTTTCATGGTATT
TGTTTTGTGTTTTGTTGTGCATGTGTATGTGTGTGTATGTGTGTGTTCAT
ATGTATGAGTGCAGGAATACACATGCCATTGTGTATGTGTAGAGGTCAGA
AGACAAACTCGGGTGTCAACCTTCACTTTTAACTTTGTTTGAAACTGGGT
GTTTTCTCATTGAGCTCTGCACGCAGCCATCAAACTATAGTGAAGTCTCC
CATCTGTAGCTCCCATTTTCCCATAGGGGCCTGGAATTATATAGGTGTAT
GGTACAACATCTGGCTTTTACATAGCTTCTAGGGACCCAAATTTGGGATC
AAGCTAGTGTGCCAAACACCATACCCAATAAGTTATCTCCCCAGACCAGA
CTTACATTTTTTTTAAATAATCTGGAAAATTGTAAGCTACTGTCATTTTA
AATATTTCCTCTTTCCCATTATTTCTATAATCTCTTTCAAATAATTTAAT
TAGACACATCTTTAAGCTTTGAATTTTTACTTTAATAT

Query= MSMg01no548_d02.b1 MSMg01no548_d02.b1 CHROMAT_FILE:
MSMg01no548_d02.b1 PHD_FILE: MSMg01no548_d02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:02 2005
         (556 letters)



>mm_chr14_22451584_22452539
          Length = 956

 Score =  899 bits (465), Expect = 0.0
 Identities = 514/551 (93%), Gaps = 33/551 (5%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggaattctttgtgaggctgcgctattacttcttattaaaggccaagcacaggctgctcag 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ggaattctttgtgaggctgcgctattacttcttattaaaggccaagcacaggctgctcag 298

                                                                       
Query: 66  cctgagtactactggcatttcaagctgaataatatattgcataggaactgtagtgtactt 125
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 299 cctgagtactactggcatttcaagctgaataatatattgcataggaactgtagtatactt 358

                                                                       
Query: 126 tttaaggtgtttagcagcatcctgccgtctacctcctggctgctgctgctggtgcctcct 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tttaaggtgtttagcagcatcctgccgtctacctcctggctgctgctgctggtgcctcct 418

                                                                       
Query: 186 gtccattcgtgacaaccaaaaatgcctctagtcagcagccacatatctgagcagaaagag 245
           ||||||||||||||||||||||||||||     |||||||||||||||||||||||||||
Sbjct: 419 gtccattcgtgacaaccaaaaatgcctc-----agcagccacatatctgagcagaaagag 473

                                                                       
Query: 246 ggtgggaggtgggtactcctagtgagtacccctgatgtgaaggataccaagtacaggtta 305
           |||||||||||                            |||||||||||||||||||||
Sbjct: 474 ggtgggaggtg----------------------------aaggataccaagtacaggtta 505

                                                                       
Query: 306 ccccacttgatgtactgtcgggctgccactcaggcagccccaagaaggcaggggagagag 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ccccacttgatgtactgtcgggctgccactcaggcagccccaagaaggcaggggagagag 565

                                                                       
Query: 366 ttggtctcagggagcctttgcgttgtgccagctttactgtttgatcctttcctcatgccc 425
           ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 566 ttggtctcagggagcctttgcgttgtgccagctttactgtttggtcctttcctcgtgccc 625

                                                                       
Query: 426 tggatgcttttcctccaacctaaagaaaattgaaacgactgttcatcttttcccagacag 485
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tggatgcttttcctccaaccgaaagaaaattgaaacgactgttcatcttttcccagacag 685

                                                                       
Query: 486 caaaacacattgtttgccttaagtaattattgaataaatcatcatgagtaaggctgtgtg 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 caaaacacattgtttgccttaagtaattattgaataaatcatcatgagtaaggctgtgtg 745

                      
Query: 546 tggacgctcta 556
           |||||||||||
Sbjct: 746 tggacgctcta 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)