BAC Information

Click to search

BAC

Clone NameB6Ng01-002F10
Chromosome15 (Build37)
Map Location 94,667,257 - 94,818,443
singlet/doubletdoublet
Overlap geneTmem117
Upstream geneD630010B17Rik, Adamts20, Pus7l, Irak4, Twf1
Downstream geneLOC100043315, Nell2, Dbx2, LOC100042684, LOC667849, EG629300, LOC667864, Tmem16f, LOC100043329
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002F10.bB6Ng01-002F10.g
ACCDH840396DH840397
length1,145824
definitionDH840396|Mus musculus domesticus DNA, BAC clone: B6Ng01-002F10, 5' end.DH840397|Mus musculus domesticus DNA, BAC clone: B6Ng01-002F10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,667,257 - 94,668,418)(94,817,623 - 94,818,443)
sequence
gaattccatcaatattatgaaaacctattctatatttatgcatgccaata
tttctcaaaactcatccattattaatgaataaagcaaagtagaaaaaaat
gagaaacaggcaaactcttagtaaataggactgagaattcggcgtgcaca
atgttcatggtgagaaggatttgtatccagggacaggccgtctgttagaa
agaagcagtaattcctacagagcagtaggtgtcgcagtgacttagatagt
ttaagaataataaaaagaaaggagcatggatggtacaaacctgaagtaac
aataggaagctgtctaagttaactgctctgatttaatcagtatacattat
gttcttgtgttaatatgctgcagtgtaccccataaatatgcatgattata
tccttgtattaatatactatagtataccttataaatatgcatgattatta
catactggctgaagcttaaaacaagtttaaggacatggaaattacaacaa
ccctaatttttacaaaaatttttttcaacaaccctaattttaacattaca
attatatacgtatcttggattaacaatgatagctaagtttgacattatga
ttatatacgtgtcttggattatgatagtacccaataaataatgtgcaatt
aaaataataaaaatcacacaaatttaaaaagtaaacttgatatgtcctct
ggaacagaaattagaaaattcgggagatatatttgcctgtagttcagtgg
aatggcagctggattgtgagcgtatatcagaacagaaagggaagaaaatg
gcggcccttcctgagacttaaaggaggaatggtaagaacaaaaacatcca
agaggaggaagagtggccagttattcaaagttgccatttattccagttta
ggaattaattttaggacacatgatagcttctagattcatgccagtaccca
gattggaaataaataatttggacttggcgtgctcactgctggtgcctggg
ccagtcagatggtgtatccatgatgattccgtgaaggagaatataagact
gagcatcctacgagacagcttcttatagtagagtagggtaagtcaggttt
aatatgtgccagggtcagcgaattctaatgggatcggtggaattc
gaattctcagctcctcctgcaccatgtctgcctggatgctgccatgctcc
cgccttgatgataatggactgaacctctgaacctgtaagccagccccaat
taaatgttgtccttataagagttgccttggtcatggtgtctgttcacagt
agtaaaaccctaagacagagccatccatactttcattccatgtggtcctg
aggattaaactcaggtcttcagacttgttagcaattgctttacgtggtca
gccatttcaccatccctctgctgattaaacacacaaaagcagagctatct
aattctattgtttacttgctattgttgtgaatatttggggggttcctttt
cttttctttttcttttctttattttcattgttgttgttgttgttttgatt
ttgtcagcttctgtcctaaaaagaactaagccaaccaaacctgtgctcac
tttaactctttttaagcttcttgaacactttgcctaattgtaagaaatgt
atatggtattgttatgtgtgtatgtgtgcttttattcttatatcgcttgc
tggatatcaaattgctttgtgtttgtgtaagttatcattggtaagtcaag
tccaacttcttttcagttagtagtagtataacaaaaaggtttaggggaaa
aaataaagctccaactctaacagccttaattagataagctttggatactg
tgtcaatatgccaattaaagaaacaccgtaggagaccaatcaaggaaata
gttaatcatgtgctcacattgaagagactgaaagagccgtttcgggatcc
caagatctttcagttgcgagtaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_94667257_94668418
seq2: B6Ng01-002F10.b_45_1189

seq1  GAATTCCATCAATATTATGAAAACCTATTCTATAGTTATGCATGCCAATA  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAATTCCATCAATATTATGAAAACCTATTCTATATTTATGCATGCCAATA  50

seq1  TTTCTCAAAACTCATCCATTATTAATGAATAAAGCAAAGTAGAAAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAAAACTCATCCATTATTAATGAATAAAGCAAAGTAGAAAAAAAT  100

seq1  GAGAAACAGGCAAACTCTTAGTAAATAGGACTGAGAATTCGGCGTGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACAGGCAAACTCTTAGTAAATAGGACTGAGAATTCGGCGTGCACA  150

seq1  ATGTTCATGGTGAGAAGGATTTGTATCCAGGGACAGGCCGTCTGTTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATGGTGAGAAGGATTTGTATCCAGGGACAGGCCGTCTGTTAGAA  200

seq1  AGAAGCAGTAATTCCTACAGAGCAGTAGGTGTCGCAGTGACTTAGATAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGTAATTCCTACAGAGCAGTAGGTGTCGCAGTGACTTAGATAGT  250

seq1  TTAAGAATAATAAAAAGAAAGGAGCATGGATGGTACAAACCTGAAGTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAATAATAAAAAGAAAGGAGCATGGATGGTACAAACCTGAAGTAAC  300

seq1  AATAGGAAGCTGTCTAAGTTAACTGCTCTGATTTAATCAGTATACATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAAGCTGTCTAAGTTAACTGCTCTGATTTAATCAGTATACATTAT  350

seq1  GTTCTTGTGTTAATATGCTGCAGTGTACCCCATAAATATGCATGATTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGTGTTAATATGCTGCAGTGTACCCCATAAATATGCATGATTATA  400

seq1  TCCTTGTATTAATATACTATAGTATACCTTATAAATATGCATGATTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTATTAATATACTATAGTATACCTTATAAATATGCATGATTATTA  450

seq1  CATACTGGCTGAAGCTTAAAACAAGTTTAAGGACATGGAAATTACAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGGCTGAAGCTTAAAACAAGTTTAAGGACATGGAAATTACAACAA  500

seq1  CCCTAATTTTTACAAAAATTTTTTTCAACAACCCTAATTTTAACATTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAATTTTTACAAAAATTTTTTTCAACAACCCTAATTTTAACATTACA  550

seq1  ATTATATACGTATCTTGGATTAACAATGATAGCTAAGTTTGACATTATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATACGTATCTTGGATTAACAATGATAGCTAAGTTTGACATTATGA  600

seq1  TTATATACGTGTCTTGGATTATGATAGTACCCAATAAATAATGTGCAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATACGTGTCTTGGATTATGATAGTACCCAATAAATAATGTGCAATT  650

seq1  AAAATAATAAAAATCACACAAATTTAAAAAGTAAACTTGATATGTCCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATAAAAATCACACAAATTTAAAAAGTAAACTTGATATGTCCTCT  700

seq1  GGAACAGAAATTAG-AAATTCGGGAGATATATTTGCCTGTAGTTCAGTGG  749
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGAACAGAAATTAGAAAATTCGGGAGATATATTTGCCTGTAGTTCAGTGG  750

seq1  AATGGCAGCTGGATTGTGAGCGTATATCAGAACAGAAAGGGAAGAAAATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAGCTGGATTGTGAGCGTATATCAGAACAGAAAGGGAAGAAAATG  800

seq1  GCGGCCCTTCCTGAGACTTAAAGGAGGAATGGTAAGAACAAAAACATCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCCCTTCCTGAGACTTAAAGGAGGAATGGTAAGAACAAAAACATCCA  850

seq1  AGAGGAGGAAGAGTGGCCAGTTATTCAAAGTTGCCATTTATTCCAGTTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGGAAGAGTGGCCAGTTATTCAAAGTTGCCATTTATTCCAGTTTA  900

seq1  GGAATTAATTTTTAGGACCACATGATAGCTTCTAGATTCATGCCAGTACC  949
      |||||||| |||||||| ||||||||||||||||||||||||||||||||
seq2  GGAATTAA-TTTTAGGA-CACATGATAGCTTCTAGATTCATGCCAGTACC  948

seq1  CAGATTGGAAATAAAATAATTTGGACTTGGCGTGCTCACTGCTGGTGCCT  999
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAGATTGGAAAT-AAATAATTTGGACTTGGCGTGCTCACTGCTGGTGCCT  997

seq1  GGGCCAGTTCAGAT-GTGTATCCATGATGAATTCTGTGACAGAGAATATA  1048
      ||||||| |||||| |||||||||||||| |||| ||||  |||||||||
seq2  GGGCCAG-TCAGATGGTGTATCCATGATG-ATTCCGTGAAGGAGAATATA  1045

seq1  AGAC-GAGCATCCTAAGAGACCAGCTTCATTAATAAGTTAGAGTAGAGGG  1097
      |||| |||||||||| |||| |||||||  | |||   ||||||  ||||
seq2  AGACTGAGCATCCTACGAGA-CAGCTTC--TTATA--GTAGAGT--AGGG  1088

seq1  TAAAGTCAGGTTTTATATAATGTGGCCCAGGGGTCAGCAGATTCTATAGT  1147
      | ||||||||||| ||   |||||  ||| ||||||||  ||||||  | 
seq2  T-AAGTCAGGTTTAAT---ATGTG--CCA-GGGTCAGCGAATTCTAATGG  1131

seq1  GATCGGGTGGAATGC  1162
      |||| |||||||| |
seq2  GATC-GGTGGAATTC  1145

seq1: chr15_94817623_94818443
seq2: B6Ng01-002F10.g_67_890 (reverse)

seq1  TTTACTCCCAAATGAAAGATC-TAGGATCCCGAAACAGCTCTTTTAGTCT  49
      ||||||| ||| ||||||||| | |||||||||||| ||||||| |||||
seq2  TTTACTCGCAACTGAAAGATCTTGGGATCCCGAAACGGCTCTTTCAGTCT  50

seq1  CTTCAATGTGAGCACATGATTAACTATTTCCTTG-TTGGTCTCCTACTGT  98
      |||||||||||||||||||||||||||||||||| |||||||||||| ||
seq2  CTTCAATGTGAGCACATGATTAACTATTTCCTTGATTGGTCTCCTACGGT  100

seq1  GTTTCTTTAATTGGCATATTGACACAGTAACC-AAGCTTAACTAA-TAAG  146
      ||||||||||||||||||||||||||||| || ||||||| |||| ||||
seq2  GTTTCTTTAATTGGCATATTGACACAGTATCCAAAGCTTATCTAATTAAG  150

seq1  GCTGTTAGAGTTGGAGCTTTTATTTTTCCCCTTAAACCTTTTTGTTATAC  196
      ||||||||||||||||| ||||||||| ||| ||||||||||||||||||
seq2  GCTGTTAGAGTTGGAGC-TTTATTTTTTCCCCTAAACCTTTTTGTTATAC  199

seq1  TACTACTAACTGAAAAGAAGTTGGACTTGACTTACCAATGATAACTTACA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTAACTGAAAAGAAGTTGGACTTGACTTACCAATGATAACTTACA  249

seq1  CAAACACAAAGCAATTTGATATCCAGCAAACGATATAAGAATAAAAGCAC  296
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAAACACAAAGCAATTTGATATCCAGCAAGCGATATAAGAATAAAAGCAC  299

seq1  ACATACACACATAACAATACCATATACATTTCTTACAATTAGGCAAAGTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACACATAACAATACCATATACATTTCTTACAATTAGGCAAAGTG  349

seq1  TTCAAGAAGCTTAAAAAGAGTTAAAGTGAGCACAGGTTTGGTTGGCTTAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAAGCTTAAAAAGAGTTAAAGTGAGCACAGGTTTGGTTGGCTTAG  399

seq1  TTCTTTTTAGGACAGAAGCTGACAAAATCAAAACAACAACAACAACAATG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTAGGACAGAAGCTGACAAAATCAAAACAACAACAACAACAATG  449

seq1  AAAATAAAGAAAAGAAAAAGAAAAGAAAAGGAACCCCCCAAATATTCACA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAGAAAAGAAAAAGAAAAGAAAAGGAACCCCCCAAATATTCACA  499

seq1  ACAATAGCAAGTAAACAATAGAATTAGATAGCTCTGCTTTTGTGTGTTTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAGCAAGTAAACAATAGAATTAGATAGCTCTGCTTTTGTGTGTTTA  549

seq1  ATCAGCAGAGGGATGGTGAAATGGCTGACCACGTAAAGCAATTGCTAACA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCAGAGGGATGGTGAAATGGCTGACCACGTAAAGCAATTGCTAACA  599

seq1  AGTCTGAAGACCTGAGTTTAATCCTCAGGACCACATGGAATGAAAGTATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAAGACCTGAGTTTAATCCTCAGGACCACATGGAATGAAAGTATG  649

seq1  GATGGCTCTGTCTTAGGGTTTTACTACTGTGAACAGACACCATGACCAAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCTGTCTTAGGGTTTTACTACTGTGAACAGACACCATGACCAAG  699

seq1  GCAACTCTTATAAGGACAACATTTAATTGGGGCTGGCTTACAGGTTCAGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTCTTATAAGGACAACATTTAATTGGGGCTGGCTTACAGGTTCAGA  749

seq1  GGTTCAGTCCATTATCATCAAGGCGGGAGCATGGCAGCATCCAGGCAGAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAGTCCATTATCATCAAGGCGGGAGCATGGCAGCATCCAGGCAGAC  799

seq1  ATGGTGCAGGAGGAGCTGAGAATTC  821
      |||||||||||||||||||||||||
seq2  ATGGTGCAGGAGGAGCTGAGAATTC  824