BAC Information

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BAC

Clone NameB6Ng01-006I24
Chromosome15 (Build37)
Map Location 10,663,984 - 10,803,976
singlet/doubletdoublet
Overlap genenone
Upstream geneC230086A09Rik, Prlr, Agxt2, 4930461P20Rik, Bxdc2, Rad1, 4930401A09Rik, EG666579, Rai14
Downstream geneC1qtnf3, Amacr, Slc45a2, Rxfp3, Adamts12, Tars, LOC100039772, Npr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006I24.bB6Ng01-006I24.g
ACCDH843386DH843387
length6961,111
definitionDH843386|Mus musculus domesticus DNA, BAC clone: B6Ng01-006I24, 5' end.DH843387|Mus musculus domesticus DNA, BAC clone: B6Ng01-006I24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,663,984 - 10,664,679)(10,802,846 - 10,803,976)
sequence
gaattcttttctttctttcaagttcttgctaactgggatgaggaagccta
ctatttagatatggggcaaagggttttgtttgtttgtttgtttgttttgt
tttttgaaacctagcccatcctgggacgtgatgcctttgatgtttttagg
caaggccttccagaaaccatggatggtttgtatctgcttcaaatgtcaaa
gaagctatttacttattatttatttattttattagtgcgtatatcagtta
ctttcctcaaagctttgacaaaatactagacaaaagcaacttaagaaagc
acattggtttttggatgtctagtcttgggagatggatggcttaggtgtta
aagcagagatgaaatccttagtttggatcctcaacatgcatataaaatct
gggcacacgtcagtaccggggaggtagagacagctcgatgtttggggctc
gtgcatcatcctgactagccaagtaagagagttccgggtgcagtgcaaga
ctgtctcaaagaataagatgggaaaggagggagggagacacctaaaaaca
ttgacctctctgttttctatacaacagacacatgtctactgtaacgtata
tcaacacatacacaaaaaataacaaaaaagaaaaggattaaaggtatagt
ctccacgttggcagagacagtggggaaggagtggaggaggatggac
gaattctgaggcaatacttgttctagtataaaacaacaggatctgatatc
cgtgtgtgtcaataagaaggaaatattttaatctaaccaataagaaggag
aaaaaagatgagtgattaataaaagacaaatcacatgcataaagtaacag
aaattaaaaatgaaatatttttatagaaacagaacaaacgacagtcactg
ggagctccctgttttcacacatccagactaaatacaatattatttacaaa
acataaaagtgtgttagcatgagcagtcacaggcttgctggacaccatga
gctacacccttctaaggttcctgaagatggaaagtcaccaaggctcagtt
gattgtgattttccttttctgtatgtcccacaggcacagtcctgcagctc
agcgccaaggagagggtttttggctctgcccctgtgccccagagaagccc
agcagcttctaggaaggaggaagtccggtcttactcatctcttttatctc
tcaccctgctcagggaatgtcagttccgttgaatttaaatttgagattgc
tgaacggcaaataataacggtgatttaggttcagcaatcatgctttgaat
atggtagattggtttataacacagaaccttaggaaaaataagcttggaag
aaaacacacacccatgtccatcccagtgccgtatcgtaagtcaaattaaa
gaggagcacactgccagagtcagaaatgctgtgttgctatcatggtatga
gtgctggcgttgggtagggtgtgccgccacaaaagcctgcttttcctggc
ccgtccctgttccaaaatgcgtttagcacacttgaggcatttgttaccgc
agcagccagacccttgggacccgtttgctgttgtacttccatttactgtg
gtttatacagatacctgagactgagtacgttataaaacagaagggccctg
cttctgtactatccgaatctgtgaggatgacatagttcactaggagtgca
gtgttcttatatcatgaagaaagctattaactcagtgggagttagaggtg
acatcagatccagcattcccttgacatgaataaggaagagaagggaatgt
ggttgcatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_10663984_10664679
seq2: B6Ng01-006I24.b_45_740

seq1  GAATTCTTTTCTTTCTTTCAAGTTCTTGCTAACTGGGATGAGGAAGCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTTTCTTTCAAGTTCTTGCTAACTGGGATGAGGAAGCCTA  50

seq1  CTATTTAGATATGGGGCAAAGGGTTTTGTTTGTTTGTTTGTTTGTTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTAGATATGGGGCAAAGGGTTTTGTTTGTTTGTTTGTTTGTTTTGT  100

seq1  TTTTTGAAACCTAGCCCATCCTGGGACGTGATGCCTTTGATGTTTTTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAACCTAGCCCATCCTGGGACGTGATGCCTTTGATGTTTTTAGG  150

seq1  CAAGGCCTTCCAGAAACCATGGATGGTTTGTATCTGCTTCAAATGTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCTTCCAGAAACCATGGATGGTTTGTATCTGCTTCAAATGTCAAA  200

seq1  GAAGCTATTTACTTATTATTTATTTATTTTATTAGTGCGTATATCAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTATTTACTTATTATTTATTTATTTTATTAGTGCGTATATCAGTTA  250

seq1  CTTTCCTCAAAGCTTTGACAAAATACTAGACAAAAGCAACTTAAGAAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCAAAGCTTTGACAAAATACTAGACAAAAGCAACTTAAGAAAGC  300

seq1  ACATTGGTTTTTGGATGTCTAGTCTTGGGAGATGGATGGCTTAGGTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGTTTTTGGATGTCTAGTCTTGGGAGATGGATGGCTTAGGTGTTA  350

seq1  AAGCAGAGATGAAATCCTTAGTTTGGATCCTCAACATGCATATAAAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGATGAAATCCTTAGTTTGGATCCTCAACATGCATATAAAATCT  400

seq1  GGGCACACGTCAGTACCGGGGAGGTAGAGACAGCTCGATGTTTGGGGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACACGTCAGTACCGGGGAGGTAGAGACAGCTCGATGTTTGGGGCTC  450

seq1  GTGCATCATCCTGACTAGCCAAGTAAGAGAGTTCCGGGTGCAGTGCAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATCATCCTGACTAGCCAAGTAAGAGAGTTCCGGGTGCAGTGCAAGA  500

seq1  CTGTCTCAAAGAATAAGATGGGAAAGGAGGGAGGGAGACACCTAAAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCAAAGAATAAGATGGGAAAGGAGGGAGGGAGACACCTAAAAACA  550

seq1  TTGACCTCTCTGTTTTCTATACAACAGACACATGTCTACTGTAACGTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTCTCTGTTTTCTATACAACAGACACATGTCTACTGTAACGTATA  600

seq1  TCAACACATACACAAAAAATAACAAAAAAGAAAAGGATTAAAGGTATAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACATACACAAAAAATAACAAAAAAGAAAAGGATTAAAGGTATAGT  650

seq1  CTCCACGTTGGCAGAGACAGTGGGGAAGGAGTGGAGGAGGATGGAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACGTTGGCAGAGACAGTGGGGAAGGAGTGGAGGAGGATGGAC  696

seq1: chr15_10802846_10803976
seq2: B6Ng01-006I24.g_68_1178 (reverse)

seq1  TTCATGCACCCACATTCCCCTTTCTCTTCCTCTATTTCATGTCAAGGGAA  50
      |||||||| ||||||||||  |||||||||| || ||||||||||||| |
seq2  TTCATGCAACCACATTCCC--TTCTCTTCCT-TA-TTCATGTCAAGGG-A  45

seq1  ATGCTGTGATCTGAATGGTCA-CTCTAAAACTTCACACTGAGTTTTAATA  99
      |||||| |||||||   |||| ||||||    || |||||||  ||||||
seq2  ATGCTG-GATCTGA--TGTCACCTCTAA---CTCCCACTGAG--TTAATA  87

seq1  GCCTTTCTATCATGGTATAAGAACACTGCACTCCTAAGTGGACTAAGGTC  149
      | |||||| ||||| |||||||||||||||||||| |||| ||| | |||
seq2  G-CTTTCT-TCATGATATAAGAACACTGCACTCCT-AGTGAACT-ATGTC  133

seq1  ATTCTCACAGATTCGGATAGTTACAGGAGCAGGGCCCTTCTTGTTTTATA  199
      || ||||||||||||||||| ||||| ||||||||||||| |||||||||
seq2  ATCCTCACAGATTCGGATAG-TACAGAAGCAGGGCCCTTC-TGTTTTATA  181

seq1  ACGTACTCAGTCTCAGGTATTCTGTTATAAACCACAGTAAATGGAAGTAC  249
      ||||||||||||||||||| |||| |||||||||||||||||||||||||
seq2  ACGTACTCAGTCTCAGGTA-TCTG-TATAAACCACAGTAAATGGAAGTAC  229

seq1  AACAGCAAACGGGTCCCAAGGGTCTGGCTGCTGCGGTAACAAATGCCTCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAAACGGGTCCCAAGGGTCTGGCTGCTGCGGTAACAAATGCCTCA  279

seq1  AGTGTGCTAAACGCATTTTGGAACAGGGACGGGCCAGGAAAAGCAGGCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCTAAACGCATTTTGGAACAGGGACGGGCCAGGAAAAGCAGGCTT  329

seq1  TTGTGGCGGCACACCCTACCCAACGCCAGCACTCATACCATGATAGCAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCGGCACACCCTACCCAACGCCAGCACTCATACCATGATAGCAAC  379

seq1  ACAGCATTTCTGACTCTGGCAGTGTGCTCCTCTTTAATTTGACTTACGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATTTCTGACTCTGGCAGTGTGCTCCTCTTTAATTTGACTTACGAT  429

seq1  ACGGCACTGGGATGGACATGGGTGTGTGTTTTCTTCCAAGCTTATTTTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCACTGGGATGGACATGGGTGTGTGTTTTCTTCCAAGCTTATTTTTC  479

seq1  CTAAGGTTCTGTGTTATAAACCAATCTACCATATTCAAAGCATGATTGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTTCTGTGTTATAAACCAATCTACCATATTCAAAGCATGATTGCT  529

seq1  GAACCTAAATCACCGTTATTATTTGCCGTTCAGCAATCTCAAATTTAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTAAATCACCGTTATTATTTGCCGTTCAGCAATCTCAAATTTAAAT  579

seq1  TCAACGGAACTGACATTCCCTGAGCAGGGTGAGAGATAAAAGAGATGAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGGAACTGACATTCCCTGAGCAGGGTGAGAGATAAAAGAGATGAGT  629

seq1  AAGACCGGACTTCCTCCTTCCTAGAAGCTGCTGGGCTTCTCTGGGGCACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCGGACTTCCTCCTTCCTAGAAGCTGCTGGGCTTCTCTGGGGCACA  679

seq1  GGGGCAGAGCCAAAAACCCTCTCCTTGGCGCTGAGCTGCAGGACTGTGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGAGCCAAAAACCCTCTCCTTGGCGCTGAGCTGCAGGACTGTGCC  729

seq1  TGTGGGACATACAGAAAAGGAAAATCACAATCAACTGAGCCTTGGTGACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGACATACAGAAAAGGAAAATCACAATCAACTGAGCCTTGGTGACT  779

seq1  TTCCATCTTCAGGAACCTTAGAAGGGTGTAGCTCATGGTGTCCAGCAAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTTCAGGAACCTTAGAAGGGTGTAGCTCATGGTGTCCAGCAAGC  829

seq1  CTGTGACTGCTCATGCTAACACACTTTTATGTTTTGTAAATAATATTGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACTGCTCATGCTAACACACTTTTATGTTTTGTAAATAATATTGTA  879

seq1  TTTAGTCTGGATGTGTGAAAACAGGGAGCTCCCAGTGACTGTCGTTTGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCTGGATGTGTGAAAACAGGGAGCTCCCAGTGACTGTCGTTTGTT  929

seq1  CTGTTTCTATAAAAATATTTCATTTTTAATTTCTGTTACTTTATGCATGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCTATAAAAATATTTCATTTTTAATTTCTGTTACTTTATGCATGT  979

seq1  GATTTGTCTTTTATTAATCACTCATCTTTTTTCTCCTTCTTATTGGTTAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTCTTTTATTAATCACTCATCTTTTTTCTCCTTCTTATTGGTTAG  1029

seq1  ATTAAAATATTTCCTTCTTATTGACACACACGGATATCAGATCCTGTTGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATATTTCCTTCTTATTGACACACACGGATATCAGATCCTGTTGT  1079

seq1  TTTATACTAGAACAAGTATTGCCTCAGAATTC  1131
      ||||||||||||||||||||||||||||||||
seq2  TTTATACTAGAACAAGTATTGCCTCAGAATTC  1111