BAC Information

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BAC

Clone NameB6Ng01-006L08
Chromosome15 (Build37)
Map Location 94,034,410 - 94,164,878
singlet/doubletdoublet
Overlap geneD630010B17Rik, Adamts20
Upstream geneGlt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631
Downstream genePus7l, Irak4, Twf1, Tmem117, LOC100043315, Nell2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006L08.bB6Ng01-006L08.g
ACCDH843494DH843495
length1,1331,117
definitionDH843494|Mus musculus domesticus DNA, BAC clone: B6Ng01-006L08, 5' end.DH843495|Mus musculus domesticus DNA, BAC clone: B6Ng01-006L08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,163,731 - 94,164,878)(94,034,410 - 94,035,548)
sequence
gaattcttcttcatcatgctgtgaatcctgttggttttgacaagcaaatg
gtgatgtgttttctacattccagtgtccacacagaggagtttcccagcct
ctacacccccaccccatgtgtcactcttccattctgtcctctgcagtctg
tggaattactaatctttgacttgctcatcattacctttgccattcatgat
tcaagtctgaaaggtggaccctaaatggacagagctggtctgaagggaaa
ggaccaggacttggtggcatagactgtatccctgccagtcagttcacata
agtgtcattccacctgacatgaaagttgtcataacactgtaacaacacat
attagaaagtaacctgtgcggacaacgatctagtagtaacatgacttccg
tgctggccgcaaccctaccttctgaccctgctgttgcagaagtgaaggac
gttttactccatagttactccaaatttcttttgggctccccactaagcaa
actctcacccctacccaacccacccccacttcctggtcattgaggattca
gcttataaaaagtaatttctgacaagactaattaatgtactatcgacctg
tgaatagtataaaaaaaatctgccttcctagctgagtcatttgtgctagt
tattgtaattacaggacatctacttaaatacatttctctttaatttttaa
tttctattccactctggccaaggtcttcatagaagaaaaattgcctgcgt
ccgtaagagcgaccatgcagttgtatctgaccacaattgtggccacttac
cgatgccactgtttgtgactgaaaagtgcaatatggactgtgaactcagg
taaaagagaagtccatgtgatgtaacccaatgtaacgaagatgaagtagt
tgctagatgtcttagtcaggtttctattcctgcacaaacatcatgaccag
aagcaagttggggaggaaagggtttattcagcttacacttccatactgct
gtcatcaccaaagagtcagactggacctcagcaagtcagaagcagggctg
atgcagaagccatgggaggatgttcttattggcttgcctccctggctgct
cagcttgctctcttagacccagactacacagcc
gaattccatctaattaaaacttaggccataatcaacttaatacattttat
aagatcacgtatcaaaggacaggctggctgtgaaaatgaagtgtcactgg
gctttgtgaaataagcattgaggaacaggcagggtcctttttcttctcct
ttccttcctaggccatgcttatttcatatagtagcgactgcagaaagata
cagtcctggctctgtccaggcgctgatatcaggcattcctcaccattgtg
tctgctatgacatagcttgacacattaaattttgataaaaaaaaattaaa
tcttcggtttgttttgacacatatttttgtaacagagaaataattgctgc
tttgaacttttttattccattttggattttcatcactcacggctacgtga
gatcaaagcaagaaccagcagaaaagacactaaggaatctcaccttagtg
agtaagggaatttaatttgttgtgtgtaactaaatattacttgtcttaac
tactaggttttcttagggttctatgtttcattagatactgagatacttca
tcccctgtcaacccgtattccatccctcatgagtctccagccaacccaca
aacagacctgcaagtcaaaacatcggaccttgagtgtcataggtaagtgg
actccagtgattctgtgacagcatcttccatgctacagtcagaaagggtc
tgggcagagaccactgggcttggatctctgtaatccttaacaaagttgag
ttcaagaaccatttcagagtatagagatgcctggctatcttaccactgag
aatggggatgtgatcggtacctagttcacaagtagaggcttttttggaga
aagagaaatatattcatgtcatcagtattaatccaacaactaagtgaaac
ggcatgtgtagacagttgggggcacatatgtgtatgctaacatagagcag
ccatagatagagagcctctgggaaaacatgatggttttggccacatgacg
tcaatccttttagtttctcttgtctctagcagcagtaacaaaaccatttg
ttccttgtttgtacctcggttgccgtgttggctctatggcagtatgccag
ctcagcttgcctcgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_94163731_94164878
seq2: B6Ng01-006L08.b_47_1179 (reverse)

seq1  GGCTG-GTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGG  49
      ||||| ||||||| ||    | |||||||||| ||||||| ||||| |||
seq2  GGCTGTGTAGTCTGGG----TCTAAGAGAGCAAGCTGAGC-AGCCA-GGG  44

seq1  AGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGC  99
      |||||||||| | ||||||||||  ||||||| ||||||||||| |||||
seq2  AGGCAAGCCAAT-AAGAACATCCTCCCATGGCTTCTGCATCAGC-CCTGC  92

seq1  TTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGC  149
      || ||||| ||| |||| |||||| ||||||  ||||||||||| |||||
seq2  TT-CTGACTTGC-TGAGGTCCAGT-CTGACT--CTTTGGTGATG-ACAGC  136

seq1  AGTATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCTTCTT  199
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGTATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCTTC-T  185

seq1  GGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACATCTAGCAA  249
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GGTCATGATGTTTGTGCAGGAATAGAAA-CCTGACTAAGACATCTAGCAA  234

seq1  CTACTTCATCTTCGTTACATTGGGTTACATCACATGGACTTCTCTTTTAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCATCTTCGTTACATTGGGTTACATCACATGGACTTCTCTTTTAC  284

seq1  CTGAGTTCACAGTCCATATTGCACTTTTCAGTCACAAACAGTGGCATCGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCACAGTCCATATTGCACTTTTCAGTCACAAACAGTGGCATCGG  334

seq1  TAAGTGGCCACAATTGTGGTCAGATACAACTGCATGGTCGCTCTTACGGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGCCACAATTGTGGTCAGATACAACTGCATGGTCGCTCTTACGGA  384

seq1  CGCAGGCAATTTTTCTTCTATGAAGACCTTGGCCAGAGTGGAATAGAAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGCAATTTTTCTTCTATGAAGACCTTGGCCAGAGTGGAATAGAAAT  434

seq1  TAAAAATTAAAGAGAAATGTATTTAAGTAGATGTCCTGTAATTACAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTAAAGAGAAATGTATTTAAGTAGATGTCCTGTAATTACAATAA  484

seq1  CTAGCACAAATGACTCAGCTAGGAAGGCAGATTTTTTTTATACTATTCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACAAATGACTCAGCTAGGAAGGCAGATTTTTTTTATACTATTCAC  534

seq1  AGGTCGATAGTACATTAATTAGTCTTGTCAGAAATTACTTTTTATAAGCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCGATAGTACATTAATTAGTCTTGTCAGAAATTACTTTTTATAAGCT  584

seq1  GAATCCTCAATGACCAGGAAGTGGGGGTGGGTTGGGTAGGGGTGAGAGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTCAATGACCAGGAAGTGGGGGTGGGTTGGGTAGGGGTGAGAGTT  634

seq1  TGCTTAGTGGGGAGCCCAAAAGAAATTTGGAGTAACTATGGAGTAAAACG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGTGGGGAGCCCAAAAGAAATTTGGAGTAACTATGGAGTAAAACG  684

seq1  TCCTTCACTTCTGCAACAGCAGGGTCAGAAGGTAGGGTTGCGGCCAGCAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCACTTCTGCAACAGCAGGGTCAGAAGGTAGGGTTGCGGCCAGCAC  734

seq1  GGAAGTCATGTTACTACTAGATCGTTGTCCGCACAGGTTACTTTCTAATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCATGTTACTACTAGATCGTTGTCCGCACAGGTTACTTTCTAATA  784

seq1  TGTGTTGTTACAGTGTTATGACAACTTTCATGTCAGGTGGAATGACACTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGTTACAGTGTTATGACAACTTTCATGTCAGGTGGAATGACACTT  834

seq1  ATGTGAACTGACTGGCAGGGATACAGTCTATGCCACCAAGTCCTGGTCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAACTGACTGGCAGGGATACAGTCTATGCCACCAAGTCCTGGTCCT  884

seq1  TTCCCTTCAGACCAGCTCTGTCCATTTAGGGTCCACCTTTCAGACTTGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCAGACCAGCTCTGTCCATTTAGGGTCCACCTTTCAGACTTGAA  934

seq1  TCATGAATGGCAAAGGTAATGATGAGCAAGTCAAAGATTAGTAATTCCAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAATGGCAAAGGTAATGATGAGCAAGTCAAAGATTAGTAATTCCAC  984

seq1  AGACTGCAGAGGACAGAATGGAAGAGTGACACATGGGGTGGGGGTGTAGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGCAGAGGACAGAATGGAAGAGTGACACATGGGGTGGGGGTGTAGA  1034

seq1  GGCTGGGAAACTCCTCTGTGTGGACACTGGAATGTAGAAAACACATCACC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGAAACTCCTCTGTGTGGACACTGGAATGTAGAAAACACATCACC  1084

seq1  ATTTGCTTGTCAAAACCAACAGGATTCACAGCATGATGAAGAAGAATTC  1148
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTGTCAAAACCAACAGGATTCACAGCATGATGAAGAAGAATTC  1133

seq1: chr15_94034410_94035548
seq2: B6Ng01-006L08.g_65_1181

seq1  GAATTCCATCTAATTAAAACTTAGGCCATAATCAACTTAATACATTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTAATTAAAACTTAGGCCATAATCAACTTAATACATTTTAT  50

seq1  AAGATCACGTATCAAAGGACAGGCTGGCTGTGAAAATGAAGTGTCACTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCACGTATCAAAGGACAGGCTGGCTGTGAAAATGAAGTGTCACTGG  100

seq1  GCTTTGTGAAATAAGCATTGAGGAACAGGCAGGGTCCTTTTTCTTCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTGAAATAAGCATTGAGGAACAGGCAGGGTCCTTTTTCTTCTCCT  150

seq1  TTCCTTCCTAGGCCATGCTTATTTCATATAGTAGCGACTGCAGAAAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTAGGCCATGCTTATTTCATATAGTAGCGACTGCAGAAAGATA  200

seq1  CAGTCCTGGCTCTGTCCAGGCGCTGATATCAGGCATTCCTCACCATTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTGGCTCTGTCCAGGCGCTGATATCAGGCATTCCTCACCATTGTG  250

seq1  TCTGCTATGACATAGCTTGACACATTAAATTTTGATAAAAAAAAATTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTATGACATAGCTTGACACATTAAATTTTGATAAAAAAAAATTAAA  300

seq1  TCTTCGGTTTGTTTTGACACATATTTTTGTAACAGAGAAATAATTGCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCGGTTTGTTTTGACACATATTTTTGTAACAGAGAAATAATTGCTGC  350

seq1  TTTGAACTTTTTTATTCCATTTTGGATTTTCATCACTCACGGCTACGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACTTTTTTATTCCATTTTGGATTTTCATCACTCACGGCTACGTGA  400

seq1  GATCAAAGCAAGAACCAGCAGAAAAGACACTAAGGAATCTCACCTTAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAAGCAAGAACCAGCAGAAAAGACACTAAGGAATCTCACCTTAGTG  450

seq1  AGTAAGGGAATTTAATTTGTTGTGTGTAACTAAATATTACTTGTCTTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGGAATTTAATTTGTTGTGTGTAACTAAATATTACTTGTCTTAAC  500

seq1  TACTAGGTTTTCTTAGGGTTCTATGTTTCATTAGATACTGAGATACTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGGTTTTCTTAGGGTTCTATGTTTCATTAGATACTGAGATACTTCA  550

seq1  TCCCCTGTCAACCCGTATTCCATCCCTCATGAGTCTCCAGCCAACCCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGTCAACCCGTATTCCATCCCTCATGAGTCTCCAGCCAACCCACA  600

seq1  AACAGACCTGCAAGTCAAAACATCGGACCTTGAGTGTCATAGGTAAGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACCTGCAAGTCAAAACATCGGACCTTGAGTGTCATAGGTAAGTGG  650

seq1  ACTCCAGTGATTCTGTGACAGCATCTTCCATGCTACAGTCAGAAAGGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGTGATTCTGTGACAGCATCTTCCATGCTACAGTCAGAAAGGGTC  700

seq1  TGGGCAGAGACCACTGGGCTTGGATCTCTGTAATCCTTAACAAAGTTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGAGACCACTGGGCTTGGATCTCTGTAATCCTTAACAAAGTTGAG  750

seq1  TTCAAGAACCATTTCAGAGTATAGAGATGCCTGGCTATCTTACCACTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAACCATTTCAGAGTATAGAGATGCCTGGCTATCTTACCACTGAG  800

seq1  AATGGGGATGTGATCGGTACCTAGTTCACAAGTAGAGGCTTTTTTGGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGATGTGATCGGTACCTAGTTCACAAGTAGAGGCTTTTTTGGAGA  850

seq1  AAGAGAAATATATTCATGTCATCAGTATTAATCCAACAACTAAGTGAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAATATATTCATGTCATCAGTATTAATCCAACAACTAAGTGAAAC  900

seq1  GGCATGTGTAGACAGTTGGGGGCACATATGTGTATGCTAACATAGAGCAA  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGCATGTGTAGACAGTTGGGGGCACATATGTGTATGCTAACATAGAGC-A  949

seq1  GCCATAGATAAGAGAGCCTCTGGGAAAACATGATGGTTTTTGGCCAACAT  1000
      ||||||||| |||||||||||||||||||||||||| |||||||| ||||
seq2  GCCATAGAT-AGAGAGCCTCTGGGAAAACATGATGG-TTTTGGCC-ACAT  996

seq1  GACGTTCAATCCTTTTAAGTTTTCTCTTGTCTTCTAGGCAGCAGTAAACA  1050
      |||| ||||||||||||   ||||||||||| |||| ||||||||||   
seq2  GACG-TCAATCCTTTTA--GTTTCTCTTGTC-TCTA-GCAGCAGTAA--C  1039

seq1  AAAACCATTTGTTCCTTGTTTTGTTAACCTCGGGTTTGCCGGTGTGGGCT  1100
      |||||||||||||||||| |||||  |||||||  ||||| |||| ||||
seq2  AAAACCATTTGTTCCTTG-TTTGT--ACCTCGG--TTGCC-GTGTTGGCT  1083

seq1  CATATGCCAGGTAATGCCAGCTCAGCTTTGCCTCCGTTA  1139
      | |||| |||   ||||||||||||| |||||| |||||
seq2  C-TATGGCAG--TATGCCAGCTCAGC-TTGCCT-CGTTA  1117