BAC Information

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BAC

Clone NameB6Ng01-007P12
Chromosome15 (Build37)
Map Location 43,878,559 - 44,058,337
singlet/doubletdoublet
Overlap geneTrhr
Upstream geneRspo2, LOC675960, Eif3s6, Ttc35, LOC100039288, Tmem74, LOC100039309
Downstream geneLOC665041, Nudcd1, Eny2, Pkhd1l1, Ebag9, 5730410E15Rik, A930017M01Rik, EG432950, Kcnv1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007P12.bB6Ng01-007P12.g
ACCDH844386DH844387
length956999
definitionDH844386|Mus musculus domesticus DNA, BAC clone: B6Ng01-007P12, 5' end.DH844387|Mus musculus domesticus DNA, BAC clone: B6Ng01-007P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,057,380 - 44,058,337)(43,878,559 - 43,879,561)
sequence
gaattcatcttctaaaacacattgtcttggataaagatctgatccaggaa
ctttctatcatgggactttaatacgctgtatctgaccagcaacattatag
ctacagttgttttttctggagtggaaagaagttccgcagcatgtgtgtgt
gcctagagaaagagggctaattgagaccctctagcttttagaaatatcta
ttattatagaacttcaaactattaactaacatttgcatgttactttcttt
ttgtttgggggatactgttaatttatttaaattagaaagacaatgccgag
ttgctacacactctgcataagtgtgtctctgtcgctgatcctttacctta
gcgtgcctcattcaccaatgttgactggttgaactttcattaactgctcc
acccatatgttttctttcctgttccaatatcctatctaaggtatcacatt
atgtttaatcagttgcgtttacttaagctcttctgtgatgtaagggtttt
tgccttcccttagcttcatagttttgaagaatatatcagatatcttaaac
aacaacaacaacaacacccaaacttgaatttggctgatggttttcttctt
aatagactcctaaagttctaaaatttaagaagcaggccacagacatgaaa
ggtcattcttgacacaatatatatatatatatatatgatacatgcttatc
tagtatatgattttcattttgttttccttgaactactttatatgtaatta
aatacatatatttataatgtcaaatttaggagactttagtattttagtag
ttatgcaacaacaccattatctactcttaactcatttcagcattccaacc
ctttagtaggtatgtcacaccctccttccacctgtctaggccttgcccaa
gattaatctgctgatactctatatagttacctattttggaatattttaat
gaatga
gaattcaaaagaatatataaaattggtacatgtcagttttggggaaattt
aacttgaggaggtgacaaaaagaaattaggggatcttattttagctgtgg
cttttgaagtgatacatgatgaaatattaagataccttgtttctgtaaac
atgtttttatcactatgaaaacctaaaattttaagcttccaatagttttt
aataactaaaattaggtctcagttgcttttctaatatgtcaattatattt
ggaaaatatcctaagaaagatttatcattcaattttactagtgttcttct
tttgatttagattgtttatataggagcaattcatttaaaaggtacatata
gtgtccctttctttccataagaaactaagagacattttaccatggaataa
aaccaagtaaaaattacacatgttgaaatttacaaaaatccatttaaaaa
cctagaaagtaaatccccccccccgaacttctctggaaggccaggtctct
ttccagctaatcactttgtcccacctccctccttggtaatgttacatgtg
agagaggggttaaaacaccatcttccctacaacatccctgtgactggcat
agtgaatcacagcaactctcagcacagcatccctgtgattggcatagtga
atcacaacaatcagcatccttaattgagctctgtttttctaaaatcttgc
cacccaaggcttttcttagttaatgatcagttttccccaaagtttaaaag
ggttacataatttgggtctacattatttctttttgtttctctctttgcct
cttattttctttctgatttctgtgtaacaaaagaaaaaaagcaaaagcaa
aattggtaagctatgtgattagtgagaaatcttggacagagaagggaaga
gattgctaaattgaacacttcaatgacatccttcaaatgtctctttactc
taagggcttgtgatttcagtaagattcagaagtaattgaggatttcgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_44057380_44058337
seq2: B6Ng01-007P12.b_45_1000 (reverse)

seq1  TCATTCATATAAAATATT-CAAAATAGGTAACTATATAGGAGTATCAGCA  49
      |||||||| ||||||||| ||||||||||||||||||| |||||||||||
seq2  TCATTCAT-TAAAATATTCCAAAATAGGTAACTATATA-GAGTATCAGCA  48

seq1  GATTAATCTTGGGCAAGGCCTTAGACAGGTGGAAGGAGGGTGTGACATAC  99
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GATTAATCTTGGGCAAGGCC-TAGACAGGTGGAAGGAGGGTGTGACATAC  97

seq1  CTACTAAAGGGTTGGAATGCTGAAATGAGTTAAGAGTAGATAATGGTGTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAAAGGGTTGGAATGCTGAAATGAGTTAAGAGTAGATAATGGTGTT  147

seq1  GTTGCATAACTACTAAAATACTAAAGTCTCCTAAATTTGACATTATAAAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCATAACTACTAAAATACTAAAGTCTCCTAAATTTGACATTATAAAT  197

seq1  ATATGTATTTAATTACATATAAAGTAGTTCAAGGAAAACAAAATG-AAAT  248
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATATGTATTTAATTACATATAAAGTAGTTCAAGGAAAACAAAATGAAAAT  247

seq1  CATATAACTAGATAAGCATGTATCATATATATATATATATATATTGTGTC  298
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAT-ACTAGATAAGCATGTATCATATATATATATATATATATTGTGTC  296

seq1  AAGAATGACCTTTCATGTCTGTGGCCTGCTTCTTAAATTTTAGAACTTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGACCTTTCATGTCTGTGGCCTGCTTCTTAAATTTTAGAACTTTA  346

seq1  GGAGTCTATTAAGAAGAAAACCATCAGCCAAATTCAAGTTTGGGTGTTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTATTAAGAAGAAAACCATCAGCCAAATTCAAGTTTGGGTGTTGT  396

seq1  TGTTGTTGTTGTTTAAGATATCTGATATATTCTTCAAAACTATGAAGCTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTTGTTTAAGATATCTGATATATTCTTCAAAACTATGAAGCTA  446

seq1  AGGGAAGGCAAAAACCCTTACATCACAGAAGAGCTTAAGTAAACGCAACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGGCAAAAACCCTTACATCACAGAAGAGCTTAAGTAAACGCAACT  496

seq1  GATTAAACATAATGTGATACCTTAGATAGGATATTGGAACAGGAAAGAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAACATAATGTGATACCTTAGATAGGATATTGGAACAGGAAAGAAA  546

seq1  ACATATGGGTGGAGCAGTTAATGAAAGTTCAACCAGTCAACATTGGTGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGGGTGGAGCAGTTAATGAAAGTTCAACCAGTCAACATTGGTGAA  596

seq1  TGAGGCACGCTAAGGTAAAGGATCAGCGACAGAGACACACTTATGCAGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCACGCTAAGGTAAAGGATCAGCGACAGAGACACACTTATGCAGAG  646

seq1  TGTGTAGCAACTCGGCATTGTCTTTCTAATTTAAATAAATTAACAGTATC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGCAACTCGGCATTGTCTTTCTAATTTAAATAAATTAACAGTATC  696

seq1  CCCCAAACAAAAAGAAAGTAACATGCAAATGTTAGTTAATAGTTTGAAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAACAAAAAGAAAGTAACATGCAAATGTTAGTTAATAGTTTGAAGT  746

seq1  TCTATAATAATAGATATTTCTAAAAGCTAGAGGGTCTCAATTAGCCCTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAATAATAGATATTTCTAAAAGCTAGAGGGTCTCAATTAGCCCTCT  796

seq1  TTCTCTAGGCACACACACATGCTGCGGAACTTCTTTCCACTCCAGAAAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAGGCACACACACATGCTGCGGAACTTCTTTCCACTCCAGAAAAA  846

seq1  ACAACTGTAGCTATAATGTTGCTGGTCAGATACAGCGTATTAAAGTCCCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGTAGCTATAATGTTGCTGGTCAGATACAGCGTATTAAAGTCCCA  896

seq1  TGATAGAAAGTTCCTGGATCAGATCTTTATCCAAGACAATGTGTTTTAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAAAGTTCCTGGATCAGATCTTTATCCAAGACAATGTGTTTTAGA  946

seq1  AGATGAATTC  958
      ||||||||||
seq2  AGATGAATTC  956

seq1: chr15_43878559_43879561
seq2: B6Ng01-007P12.g_70_1068

seq1  GAATTCAAAAGAATATATAAAATTGGTACATGTCAGTTTTGGGGAAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGAATATATAAAATTGGTACATGTCAGTTTTGGGGAAATTT  50

seq1  AACTTGAGGAGGTGACAAAAAGAAATTAGGGGATCTTATTTTAGCTGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAGGAGGTGACAAAAAGAAATTAGGGGATCTTATTTTAGCTGTGG  100

seq1  CTTTTGAAGTGATACATGATGAAATATTAAGATACCTTGTTTCTGTAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAAGTGATACATGATGAAATATTAAGATACCTTGTTTCTGTAAAC  150

seq1  ATGTTTTTATCACTATGAAAACCTAAAATTTTAAGCTTCCAATAGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTATCACTATGAAAACCTAAAATTTTAAGCTTCCAATAGTTTTT  200

seq1  AATAACTAAAATTAGGTCTCAGTTGCTTTTCTAATATGTCAATTATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTAAAATTAGGTCTCAGTTGCTTTTCTAATATGTCAATTATATTT  250

seq1  GGAAAATATCCTAAGAAAGATTTATCATTCAATTTTACTAGTGTTCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATATCCTAAGAAAGATTTATCATTCAATTTTACTAGTGTTCTTCT  300

seq1  TTTGATTTAGATTGTTTATATAGGAGCAATTCATTTAAAAGGTACATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTAGATTGTTTATATAGGAGCAATTCATTTAAAAGGTACATATA  350

seq1  GTGTCCCTTTCTTTCCATAAGAAACTAAGAGACATTTTACCATGGAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCCTTTCTTTCCATAAGAAACTAAGAGACATTTTACCATGGAATAA  400

seq1  AACCAAGTAAAAATTACACATGTTGAAATTTACAAAAATCCATTTAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGTAAAAATTACACATGTTGAAATTTACAAAAATCCATTTAAAAA  450

seq1  CCTAGAAAGTAAATCCCCCCCCCCGAACTTCTCTGGAAGGCCAGGTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAAGTAAATCCCCCCCCCCGAACTTCTCTGGAAGGCCAGGTCTCT  500

seq1  TTCCAGCTAATCACTTTGTCCCACCTCCCTCCTTGGTAATGTTACATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCTAATCACTTTGTCCCACCTCCCTCCTTGGTAATGTTACATGTG  550

seq1  AGAGAGGGGTTAAAACACCATCTTCCCTACAACATCCCTGTGACTGGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGGTTAAAACACCATCTTCCCTACAACATCCCTGTGACTGGCAT  600

seq1  AGTGAATCACAGCAACTCTCAGCACAGCATCCCTGTGATTGGCATAGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATCACAGCAACTCTCAGCACAGCATCCCTGTGATTGGCATAGTGA  650

seq1  ATCACAACAATCAGCATCCTTAATTGAGCTCTGTTTTTCTAAAATCTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAACAATCAGCATCCTTAATTGAGCTCTGTTTTTCTAAAATCTTGC  700

seq1  CACCCAAGGC-TTTCTTAGTTAATGATCAGTTTTCCCCAAAGTTTAAAAG  749
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CACCCAAGGCTTTTCTTAGTTAATGATCAGTTTTCCCCAAAGTTTAAAAG  750

seq1  GG-TACATAATTTGGGTCTACATTATTTCTTTTTGTTTTCTCTC-TTGCC  797
      || |||||||||||||||||||||||||||||||| |||||||| |||||
seq2  GGTTACATAATTTGGGTCTACATTATTTCTTTTTG-TTTCTCTCTTTGCC  799

seq1  TCTTA-TTTCTTTCTGATTTCTGTGTAACAAAAGAAAAAAAAGCAAAAGC  846
      ||||| |||||||||||||||||||||||||||| |||||||||||||||
seq2  TCTTATTTTCTTTCTGATTTCTGTGTAACAAAAG-AAAAAAAGCAAAAGC  848

seq1  AAAATTGGTAAGCTATGTGATTAGTGAGAAATCTTGGACAGAGAAGGGAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGGTAAGCTATGTGATTAGTGAGAAATCTTGGACAGAGAAGGGAA  898

seq1  GAGATTGCTAAAATTGAACACTTCAATGACATCCTTCAAATGTCTCTTTT  946
      ||||||||| ||||||||||||||||||||||||||||||||||||||| 
seq2  GAGATTGCT-AAATTGAACACTTCAATGACATCCTTCAAATGTCTCTTT-  946

seq1  ACCTCTAAGGCCTTTGTGATTTCCAGTAAAGATTCAGAAGTAAATGAGGA  996
        |||||||| | ||||||||| |||| ||||||||||||||| ||||||
seq2  -ACTCTAAGGGC-TTGTGATTT-CAGT-AAGATTCAGAAGTAATTGAGGA  992

seq1  TTTCGGA  1003
      |||||||
seq2  TTTCGGA  999