BAC Information

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BAC

Clone NameB6Ng01-011G02
Chromosome15 (Build37)
Map Location 52,174,180 - 52,222,097
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039662, Eif3s3, LOC100039679, D530033C11Rik, Rad21, Aard, LOC100039720, LOC665219, Slc30a8
Downstream geneLOC100039748, Thrap6, LOC100039745, Ext1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011G02.bB6Ng01-011G02.g
ACCDH846781DH846782
length1,160994
definitionDH846781|Mus musculus domesticus DNA, BAC clone: B6Ng01-011G02, 5' end.DH846782|Mus musculus domesticus DNA, BAC clone: B6Ng01-011G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(52,220,948 - 52,222,097)(52,174,180 - 52,175,167)
sequence
gaattctactggaaaaagaaatctattgtaaaccaatcctaagcctactt
agcatgcaggtgatgttgaatacataatataaatgaagcaaggcaatttc
taagttgctccaatcatttcaagatgtagacaggaggcaaatgagcacag
cctaattatgccttatgagacgagctcacacacacacacacacacaaaat
ggccattagataagggatctcaaattctggtcactaaatatcactgaata
aattgaaagcatatatcaacatttttagttatttgccgaacatatgcgtt
catcagagttttaaaagctctaattatgaaaatatgcacttgaagcccat
gtgtatgcacaaatacacacaaagcatgctaaaatcattaaatcctaaca
tgaaatttataaaagcaaattaaattcgaattcttacgttaggagaaatt
agtgctaaacactatatttaaaaacatgtattttcaaattcaatgcagtg
ttgcttttacatgtattgtacctgaacaataagagaaagagaagagagca
ttagacatttctaagaatgtctaagaatttctaagaaaactctgtgtgaa
ttactaagtcctaatgctgaagatatatgattgtaaagctcacgcatttt
tcgccataaattcaaagcaccattagtttgtgacaaatagcaatgacttt
tatgaagcaacagaccatagttcaaagaaataatgtttaaattaaattaa
actgtgaagtgcagtaatatgtttcccagttaagatggtccatgcaagca
tttttgcaggtttgtgagacttatgagctgtgtgctatatctgcgtacta
ctttgcctttcggttccatagctctgcatgtggagggggtgcatctgtgg
catggatgtctagggcagttctggatttttcaagaaacaacacccaatat
tctagttttactaaaccttctatttgttattctttgactgagtgttttct
ggaaaatggcagggtgttataaagtcaaatctcatatcttccatgattgg
ccaactttggcaattatccttctcccaacaaattcctgggtcaaaataca
agttttcgtaatctcattacatgaagaaatacgaaatcttttctgctcta
caatttagcc
gaattcccccagctttcaaaacatcatttctgtcaaaacatcgtacctca
ttcttctgagtactgaaatcaggtcaacctctctgccctctccttcctta
atatgcttctccattgtccaacacttagttgagattcatctagggctcga
tggtaatgttagggctcataaaagaaatttatgtgttccatatgtttggt
tgcagatggaaaatgggaattctgaaggacatgaccgagagagtgctgct
gcatggagcattgatttggaagttagattacctaagttgggatctcagct
cttcatcttattggctctgtaacctctcacgctggttacttaagtactct
gacccttcatttcctgagtggcaaaacgttcctatttagttgcctgagta
ttaaaaaaaaattggaacagttagaagagttcaaactgtgcaaagtgttt
ggtcatcattcaggatatattagcgatcatttatgaaagtgagaatatat
atatatatatatatatatatatatatatatatatatctcacagatttaaa
tcatccaactctttagaaactcctatgtcatcagcacaaataccactaca
gacaagcaaaatggctggtgaaaattaaacagtctttttataagaaagaa
taattgagccttgctgagataaaggcgttaactgagagaacacttcccac
cgaggaagtcatgaactaattaaatcagtccaatctcttcctgtcagtct
ctgaaaatgtctactctcatctttgaagcagaggctgattaatcactcca
agtgtgtttattagcaaaaaagtgtaactggccagcttccagagggtaat
catagcttctttctagcttccccagttcctataaagatcacactaccatc
tctcactttctccctttttgccccaactcattttaaaagaacatttttct
acaatgtttattttatttatgtttttagtgtgggtggggtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_52220948_52222097
seq2: B6Ng01-011G02.b_45_1204 (reverse)

seq1  GGCTAAAATTGTAGAGCAGAAAAGA-TTCGTATGTCATCATGTAATGAAG  49
      |||| |||||||||||||||||||| ||||||| || |||||||||| ||
seq2  GGCT-AAATTGTAGAGCAGAAAAGATTTCGTATTTCTTCATGTAATG-AG  48

seq1  ATAACG-AAACTTGTATTTTGA-CCAGGAATTTGGTGGGGAGAGGATAA-  96
      || ||| ||||||||||||||| ||||||||||| ||||   ||||||| 
seq2  ATTACGAAAACTTGTATTTTGACCCAGGAATTTGTTGGGAGAAGGATAAT  98

seq1  TGCCAAAGTTGG-CAATCAT-GAAGATATGAGATTTGACTTTATAACA-C  143
      |||||||||||| ||||||| ||||||||||||||||||||||||||| |
seq2  TGCCAAAGTTGGCCAATCATGGAAGATATGAGATTTGACTTTATAACACC  148

seq1  CTG-CATTTTCAGGAAAACACTCAAGTCAAAGAATAAC-AATAGAAGG-T  190
      ||| |||||||  |||||||||| |||||||||||||| ||||||||| |
seq2  CTGCCATTTTCCAGAAAACACTC-AGTCAAAGAATAACAAATAGAAGGTT  197

seq1  TAGTAAAACTAGAATATTGGGTG-TGTTTCTTGAGAAATCCAGAACTG-C  238
      ||||||||||||||||||||||| |||||||||| ||||||||||||| |
seq2  TAGTAAAACTAGAATATTGGGTGTTGTTTCTTGAAAAATCCAGAACTGCC  247

seq1  CTAGACATCCATGCCACAGATGCACCCCCTCCACATGCAGAGCTATGGAA  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACATCCATGCCACAGATGCACCCCCTCCACATGCAGAGCTATGGAA  297

seq1  CCGAAAGGCAAAGTAGTACGCAGATATAGCACACAGCTCATAAGTCTCAC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAAGGCAAAGTAGTACGCAGATATAGCACACAGCTCATAAGTCTCAC  347

seq1  AAACCTGCAAAAATGCTTGCATGGACCATCTTAACTGGGAAACATATTAC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGCAAAAATGCTTGCATGGACCATCTTAACTGGGAAACATATTAC  397

seq1  TGCACTTCACAG-TTAATTTAATTTAAACATTATTTCTTTGAACTATGGT  437
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGCACTTCACAGTTTAATTTAATTTAAACATTATTTCTTTGAACTATGGT  447

seq1  CTGTTGCTTCATAAAAGTCATTGCTATTTGTCACAAACTAATGGTGCTTT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCTTCATAAAAGTCATTGCTATTTGTCACAAACTAATGGTGCTTT  497

seq1  GAATTTATGGCGAAAAATGCGTGAGCTTTACAATCATATATCTTCAGCAT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTATGGCGAAAAATGCGTGAGCTTTACAATCATATATCTTCAGCAT  547

seq1  TAGGACTTAGTAATTCACACAGAGTTTTCTTAGAAATTCTTAGACATTCT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACTTAGTAATTCACACAGAGTTTTCTTAGAAATTCTTAGACATTCT  597

seq1  TAGAAATGTCTAATGCTCTCTTCTCTTTCTCTTATTGTTCAGGTACAATA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGTCTAATGCTCTCTTCTCTTTCTCTTATTGTTCAGGTACAATA  647

seq1  CATGTAAAAGCAACACTGCATTGAATTTGAAAATACATGTTTTTAAATAT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAAAAGCAACACTGCATTGAATTTGAAAATACATGTTTTTAAATAT  697

seq1  AGTGTTTAGCACTAATTTCTCCTAACGTAAGAATTCGAATTTAATTTGCT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTAGCACTAATTTCTCCTAACGTAAGAATTCGAATTTAATTTGCT  747

seq1  TTTATAAATTTCATGTTAGGATTTAATGATTTTAGCATGCTTTGTGTGTA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAATTTCATGTTAGGATTTAATGATTTTAGCATGCTTTGTGTGTA  797

seq1  TTTGTGCATACACATGGGCTTCAAGTGCATATTTTCATAATTAGAGCTTT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCATACACATGGGCTTCAAGTGCATATTTTCATAATTAGAGCTTT  847

seq1  TAAAACTCTGATGAACGCATATGTTCGGCAAATAACTAAAAATGTTGATA  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTCTGATGAACGCATATGTTCGGCAAATAACTAAAAATGTTGATA  897

seq1  TATGCTTTCAATTTATTCAGTGATATTTAGTGACCAGAATTTGAGATCCC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTTCAATTTATTCAGTGATATTTAGTGACCAGAATTTGAGATCCC  947

seq1  TTATCTAATGGCCATTTTGTGTGTGTGTGTGTGTGTGAGCTCGTCTCATA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTAATGGCCATTTTGTGTGTGTGTGTGTGTGTGAGCTCGTCTCATA  997

seq1  AGGCATAATTAGGCTGTGCTCATTTGCCTCCTGTCTACATCTTGAAATGA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATAATTAGGCTGTGCTCATTTGCCTCCTGTCTACATCTTGAAATGA  1047

seq1  TTGGAGCAACTTAGAAATTGCCTTGCTTCATTTATATTATGTATTCAACA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCAACTTAGAAATTGCCTTGCTTCATTTATATTATGTATTCAACA  1097

seq1  TCACCTGCATGCTAAGTAGGCTTAGGATTGGTTTACAATAGATTTCTTTT  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGCATGCTAAGTAGGCTTAGGATTGGTTTACAATAGATTTCTTTT  1147

seq1  TCCAGTAGAATTC  1150
      |||||||||||||
seq2  TCCAGTAGAATTC  1160

seq1: chr15_52174180_52175167
seq2: B6Ng01-011G02.g_64_1057

seq1  GAATTCCCCCAGCTTTCAAAACATCATTTCTGTCAAAACATCGTACCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCCAGCTTTCAAAACATCATTTCTGTCAAAACATCGTACCTCA  50

seq1  TTCTTCTGAGTACTGAAATCAGGTCAACCTCTCTGCCCTCTCCTTCCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTGAGTACTGAAATCAGGTCAACCTCTCTGCCCTCTCCTTCCTTA  100

seq1  ATATGCTTCTCCATTGTCCAACACTTAGTTGAGATTCATCTAGGGCTCGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTTCTCCATTGTCCAACACTTAGTTGAGATTCATCTAGGGCTCGA  150

seq1  TGGTAATGTTAGGGCTCATAAAAGAAATTTATGTGTTCCATATGTTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATGTTAGGGCTCATAAAAGAAATTTATGTGTTCCATATGTTTGGT  200

seq1  TGCAGATGGAAAATGGGAATTCTGAAGGACATGACCGAGAGAGTGCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGGAAAATGGGAATTCTGAAGGACATGACCGAGAGAGTGCTGCT  250

seq1  GCATGGAGCATTGATTTGGAAGTTAGATTACCTAAGTTGGGATCTCAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGAGCATTGATTTGGAAGTTAGATTACCTAAGTTGGGATCTCAGCT  300

seq1  CTTCATCTTATTGGCTCTGTAACCTCTCACGCTGGTTACTTAAGTACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCTTATTGGCTCTGTAACCTCTCACGCTGGTTACTTAAGTACTCT  350

seq1  GACCCTTCATTTCCTGAGTGGCAAAACGTTCCTATTTAGTTGCCTGAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTTCATTTCCTGAGTGGCAAAACGTTCCTATTTAGTTGCCTGAGTA  400

seq1  TTAAAAAAAAATTGGAACAGTTAGAAGAGTTCAAACTGTGCAAAGTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAAATTGGAACAGTTAGAAGAGTTCAAACTGTGCAAAGTGTTT  450

seq1  GGTCATCATTCAGGATATATTAGCGATCATTTATGAAAGTGAGAATATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCATTCAGGATATATTAGCGATCATTTATGAAAGTGAGAATATAT  500

seq1  ATATATATATATATATATATATATATATATATATATCTCACAGATTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATCTCACAGATTTAAA  550

seq1  TCATCCAACTCTTTAGAAACTCCTATGTCATCAGCACAAATACCACTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCAACTCTTTAGAAACTCCTATGTCATCAGCACAAATACCACTACA  600

seq1  GACAAGCAAAATGGCTGGTGAAAATTAAACAGTCTTTTTATAAGAAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGCAAAATGGCTGGTGAAAATTAAACAGTCTTTTTATAAGAAAGAA  650

seq1  TAATTGAGCCTTGCTGAGATAAAGGCGTTAACTGAGAGAACACTTCCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAGCCTTGCTGAGATAAAGGCGTTAACTGAGAGAACACTTCCCAC  700

seq1  CGAGGAAGTCATGAACTAATTAAATCAGTCCAATCTCTTCCTGTCAGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGAAGTCATGAACTAATTAAATCAGTCCAATCTCTTCCTGTCAGTCT  750

seq1  CTGAAAATGTCTACTCTCATCTTTGAAGCAGAGGCTGATTAATCACTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATGTCTACTCTCATCTTTGAAGCAGAGGCTGATTAATCACTCCA  800

seq1  AGTGTGTTTATTAGCAAAAAAGTGTAACTGGCCAGCTCCAAGAGGGTAAT  850
      ||||||||||||||||||||||||||||||||||||| | ||||||||||
seq2  AGTGTGTTTATTAGCAAAAAAGTGTAACTGGCCAGCTTCCAGAGGGTAAT  850

seq1  CATAGCTTCTTTCTAGCTTCCCCAGTTCCTATAAAGTATCACACTACCAT  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CATAGCTTCTTTCTAGCTTCCCCAGTTCCTATAAAG-ATCACACTACCAT  899

seq1  CTCTCACTTTCTCCCTTTTTGCCCCAACTCATTTTAAAAGAACA-TTTTC  949
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTCTCACTTTCTCCCTTTTTGCCCCAACTCATTTTAAAAGAACATTTTTC  949

seq1  TACAAATGTTTA-TTTATTTATG-TTTTAGTGTGTGT---GTGT--  988
      ||| |||||||| |||||||||| |||||||||| ||   ||||  
seq2  TAC-AATGTTTATTTTATTTATGTTTTTAGTGTGGGTGGGGTGTGT  994