BAC Information

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BAC

Clone NameB6Ng01-012J13
Chromosome15 (Build37)
Map Location 72,393,966 - 72,394,764
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040847, Col22a1, Kcnk9
Downstream gene1810044A24Rik, LOC665621, Peg13, LOC100041120, Chrac1, Eif2c2, Ptk2, LOC666053, LOC100040929, Dennd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012J13.bB6Ng01-012J13.g
ACCDH847647DH847648
length1,0991,183
definitionDH847647|Mus musculus domesticus DNA, BAC clone: B6Ng01-012J13, 5' end.DH847648|Mus musculus domesticus DNA, BAC clone: B6Ng01-012J13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccacattttttaatggggttatttgatt
ttctggagttcaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtctttttgacagtgtcttttgccttacagaagctttgcaatttta
tgaggtcccatttgtcgattctcaatcttacagcacaagccattgctgtt
ctattcaggaattttccccctgtgtccatatcttcgagatttttttccca
atttctcctctataaatttcagtgtctctggttttatgtggagttcctta
atccacttagatttgaccttagtacaaggagataagaatggatcaattcg
cattcttctacatgataacagtcagttgtgacagcaccatttgttgaaaa
tgctgtcttttttccactggatggttttagctcccttgtcaaagatcaag
tgaccataggtgtgtggattcatttctgggtcttcaattctattccattg
gtcaacttctctgttgctataccagtaccatgcaattttttatcacaatt
gctctgtagtagagctttaggtcaggcatggtgattccaccagaggttct
tttatcattgagaagagtttttgctatcctaggttttttgttattccaga
tgaatttgcaaattgccctttctaattcattgaagaattgagttggaatt
ttgatggggattgcgttgaatctgtagattgcttttaggcaagatggcca
tttttactatattagtttgtgggctttaggagtcttagttctctctgcca
ttttcgccttcacatgcaagtgcagctaacatggcaacaacttgcagcat
gactcgacatccttctatataccctgctgtttaggactcatggaaatctt
gtttaaattttatgtgcattgtcaattcccaagggaaaagaggggagcaa
agccttcagagggctctaaagttccttctgcctcctgttattgtcactcc
tcagaggccttcctggtctccagtggctctgagacatcacctccactgt
gaattcatttgaaatgtttaaaaaatatacttgctgttcttttctagcaa
tcaaggggttaaggatgctgattcctgggataatcaaaagggtacctgga
gtaaatgactgaattgatatgtaaataaaaagactgggctttggtctgca
agagagagctacccagacagaactacttggagagtgaacacagctctttt
agaatttttttttctagcagcttttctgactttggtcagaaaacccatga
actatccacagagctttgaaaatttgtttctagcaggagaaagctgtctt
taccagagagctgtgtcaagcagaaagctgtctggagcagactgcagagc
caagtggtatcggtatctatagagctttttggagaatcatcttaagcaga
acacaaggttgtcagtttgtacccatgattgacttcaagtcatttctttt
gctgctcccaaataccttgaacccttctccaagctaaggctggtccttgg
caacaaataagatatttacattatgattcctagcagaagcaaattacagt
tgtgaagcagcaatcaaataattttatggttacaacatgaagaactatat
gaaagggttgtagcatttggaaggttgagaaccactgcctcagagcctga
gggaactgccacttgtttctcagaattgggaccacagggaagcatcaaca
tcaatttccagcttagggctcagctttgaacatacatgtgataggaggga
tacaaaatgacatttgaaagaagatgccagcatcataaaaattaactgac
atgaataatgcatatgcctgtgtatgtgactggaaatatgtaaaactgta
gccatgggggggggggggcgggtatcacagataatagtttttctttagaa
ttttccatgtgtgtactacatatcaggcttcattacttgatcagagatac
aagttatattgcggtaacaagctgtggttaagtttcaagtactaacatgg
tctttaaccccggtcatcatgagtctggccgtggtttagggtccgtggct
tgtcttgggaaagatctgaaccactttgccaatgtcagacttgtttttca
cgaacttcagatccctagatgaaccggagcttgggtcactgatgggtgcg
tggactctcatgagactgtgaactcggaattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_72393966_72394764
seq2: B6Ng01-012J13.b_358_1142

seq1  AATTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTT  50

seq1  GACCTTAGTACAAGGAGATAAGAATGGATCAATTCGCATTCTTCTACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTAGTACAAGGAGATAAGAATGGATCAATTCGCATTCTTCTACATG  100

seq1  ATAACAGTCAGTTGTGACAGCACCATTTGTTGAAAATGCTGTCTTTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAGTCAGTTGTGACAGCACCATTTGTTGAAAATGCTGTCTTTTTTC  150

seq1  CACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTG  200

seq1  TGGATTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCAACTTCTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCAACTTCTCTGT  250

seq1  TGCTATACCAGTACCATGCAATTTTTTATCACAATTGCTCTGTAGTAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATACCAGTACCATGCAATTTTTTATCACAATTGCTCTGTAGTAGAG  300

seq1  CTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATCATTGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATCATTGAGAA  350

seq1  GAGTTTTTGCTATCCTAGGTTTTTTGTTATTCCAGATGAATTTGCAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTTGCTATCCTAGGTTTTTTGTTATTCCAGATGAATTTGCAAATT  400

seq1  GCCCTTTCTAATTCATTGAAGAATTGAGTTGGAATTTTGATGGGGATTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTCTAATTCATTGAAGAATTGAGTTGGAATTTTGATGGGGATTGC  450

seq1  GTTGAATCTGTAGATTGCTTTTAGGCAAGATGGCCATTTTTACTATATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATCTGTAGATTGCTTTTAGGCAAGATGGCCATTTTTACTATATTA  500

seq1  GTTTGTGGGCTTTAGGAGTCTTAGTTCTCTCTGCCATTTTCGCCTTCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGGGCTTTAGGAGTCTTAGTTCTCTCTGCCATTTTCGCCTTCACA  550

seq1  TGCAAGTGCAGCTAACATGGCAACAACTTGCAGCATGACTCGACATCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGTGCAGCTAACATGGCAACAACTTGCAGCATGACTCGACATCCTT  600

seq1  CTATATAACCCTGCTGTTTTAAGGACTCATGGAAATCTTGTTTATATTTT  650
      |||||| ||||||||||||  ||||||||||||||||||||||| | |||
seq2  CTATAT-ACCCTGCTGTTT--AGGACTCATGGAAATCTTGTTTA-AATTT  646

seq1  TATGTGCATTGTCAATTCCCAAGGGAAAAGAAGGGGAGCAAAGCCTTCCA  700
      |||||||||||||||||||||||||||||| |||||||||||||||| ||
seq2  TATGTGCATTGTCAATTCCCAAGGGAAAAG-AGGGGAGCAAAGCCTT-CA  694

seq1  GAGGGCTCTAAAAGTTCC-TCTGCCTCCTGTTATTTGTTCACTTCCTCCA  749
      ||||||||| |||||||| ||||||||||||||||   |||| |||| ||
seq2  GAGGGCTCT-AAAGTTCCTTCTGCCTCCTGTTATT--GTCAC-TCCT-CA  739

seq1  GAAAGCCTTCCTGGGCCCCCAAGTTGGCTCTGAGACATCACTCCAACTGT  799
      | | |||||||||| | ||  || |||||||||||||||||  | |||||
seq2  G-AGGCCTTCCTGGTCTCC--AG-TGGCTCTGAGACATCACCTCCACTGT  785