BAC Information

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BAC

Clone NameB6Ng01-013O07
Chromosome15 (Build37)
Map Location 19,583,279 - 19,765,238
singlet/doubletdoublet
Overlap geneLOC621884, LOC100040265
Upstream geneCdh10, EG666857, EG666875
Downstream geneAcot10, LOC100040302
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013O07.bB6Ng01-013O07.g
ACCDH848593DH848594
length1,0931,069
definitionDH848593|Mus musculus domesticus DNA, BAC clone: B6Ng01-013O07, 5' end.DH848594|Mus musculus domesticus DNA, BAC clone: B6Ng01-013O07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,764,144 - 19,765,238)(19,583,279 - 19,584,356)
sequence
gaattccctgagacttggggaacgtccctgtttgaatacagagaaaactg
tacacgtatctgtagacccaacatggagagcttgaggcacgggggccatt
tagattccttggattgctagagagacagaacagatgagcttcagatacag
tgaacaagccagaattaaaaacaaacaaacaaacaaacaaacaaaaacaa
aacaaacaaacaaaacaaaaacagaaacaacaaaaacaaaaaaaaaatct
ggacagagctcgtgtgactcttcttcaggtgcaaatacagaagccagcat
gaaggctgtggggggaataataaaagaagtttggaaagaaagaaaagaat
agaaaaaaaaatcgttgaataaagtaagtgtacagcgatcacctgagtca
gtgctgtcctcgccagcatgctcatgttgaagacataatctttcagagct
tcatgtgttcgatttctgagagtttaaaaagagcgtttaagcccctgagg
ggtcctcagctcctgctgaagcctgaagtcagccctaccattcttagtag
agaaccctagcaagtgtgagagagacagtacacagcccatcctttttaca
gctgataggctgcaagatgacatcaatgcccaaacggaggctccaggacc
ttcaacattaaaactttcgggtagcatttgaaatgtaaatgaagaaaata
tctaataaaaaaattcccatagaaagctctgatagacttcgcttttaaca
ggttttagggcctttaggcaagtgatttcagttctctacgcctgaaggtg
tagtttgaggctaaacttatccaaatcccctaatgttttgaaggctgatc
ttattttcaaagcgcccacaattaaaaatagcaaagaagtcattgccaat
tttaaaggagtcaggctctttccacatatcaattagtagattattaaact
aaggatactattatttaagagaggcataagttatcattgttttttattgt
cttgaattttagcaccatagcctacttagccaaatagaaaaaataaatac
cctatgcattccttttattgttcttatttagaccaagtgatac
gaattctctatgtcttacgaggccattgtgtccacagttccaataaaaag
aaccatttatcaaggagagtaggtagtttggccatgtactatcccctcaa
ggcatgctgtcaactggtggttgaacctcatcagcatattgatcatgggt
ttggaactactctaaggatggttttatctttttcaatatatatattactg
tttccaaaagaaattatgcttttccttgacaacagctataagacaaaaat
tcaaactaaatcgaaggagggatagtgagttttttaacatctggatgaca
gtctattgttgagcaataaacagacagagcatatcataaatcatagccag
gcaacataattgcatactttacagaactctaaacttagatgttagctttt
ttatattcattagatttactataatatatttctttgaaggccttctttaa
tttagtggaaaaatacatgatcacattcatatggaagaaaacagttctgc
aaccatcagatacacatataacactatcaatgaactagtgttagacatat
taaggcatctttaaattggttctctttggataaaattaaggggaaatagt
gtaataagttaagaattttcataattattaaaattaaatcttgttaatag
agtctaatggattttattgaacaatattaatttactcataaaatccattg
atttaaactaaaatttctgatgaaaacaagattgtaggaccttctttatg
ccattttaaactatggaataattttggcattagaagtattgacaaaacat
agttatacgataatgttaaggttatagcatttaactatgaaattcagtag
cttttagataacataaataacattgtaaaaagagattcttttaattttaa
aataaatgaaccttttaaagggatattatatttcacatcatttctatctt
tggattgtatacacgtgaaattaacatttgttgttatttgtgatcatctt
agcctctctgatgaaatcacttgcacgtgatgatgcttttgaatatatgt
gaatttagcttattttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_19764144_19765238
seq2: B6Ng01-013O07.b_43_1135 (reverse)

seq1  GTATCACTTTGTCTTAAATAAGAACAATAAAAAGGAATGCATA-GGTATT  49
      ||||||||| ||| |||||||||||||| |||||||||||||| ||||||
seq2  GTATCACTTGGTC-TAAATAAGAACAAT-AAAAGGAATGCATAGGGTATT  48

seq1  TATTTTTTTCTATTTGGCCTAAGTAGGCCTATGTGGCTAAAATTC-AGAC  98
      || |||||||||||||| ||||||||| |||||  |||||||||| ||||
seq2  TA-TTTTTTCTATTTGG-CTAAGTAGG-CTATGGTGCTAAAATTCAAGAC  95

seq1  ACT-ACAAACAATGATTAACTTATTGCTCTCTT-AATAATAGTATCCTTA  146
      | | | ||||||||| ||||||||  ||||||| ||||||||||||||||
seq2  AATAAAAAACAATGA-TAACTTATGCCTCTCTTAAATAATAGTATCCTTA  144

seq1  GTTTATTAATCTACTAATTGATATGTGGAAAGAGCCTGACTCCTTTAAAA  196
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATAATCTACTAATTGATATGTGGAAAGAGCCTGACTCCTTTAAAA  194

seq1  TTGGCAATGACTTTCTTTTGCTA-TTTTAATTGTGGGCGCTTTGAAAATA  245
      |||||||||||||   ||||||| ||||||||||||||||||||||||||
seq2  TTGGCAATGACTT--CTTTGCTATTTTTAATTGTGGGCGCTTTGAAAATA  242

seq1  AGATCAGCCTTCAAAACATTAGGGGATTTGGATAAGTTTAGCCTCAAACT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGCCTTCAAAACATTAGGGGATTTGGATAAGTTTAGCCTCAAACT  292

seq1  ACACCTTCAGGCGTAGAGAACTGAAATCACTTGCCT-AAGGCCCTAAAAC  344
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACACCTTCAGGCGTAGAGAACTGAAATCACTTGCCTAAAGGCCCTAAAAC  342

seq1  CTGTTAAAAGCGAAGTCTATCAGAGCTTTCTATGGGAATTTTTTTATTAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAAAAGCGAAGTCTATCAGAGCTTTCTATGGGAATTTTTTTATTAG  392

seq1  ATATTTTCTTCATTTACATTTCAAATGCTACCCGAAAGTTTTAATGTTGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCTTCATTTACATTTCAAATGCTACCCGAAAGTTTTAATGTTGA  442

seq1  AGGTCCTGGAGCCTCCGTTTGGGCATTGATGTCATCTTGCAGCCTATCAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTGGAGCCTCCGTTTGGGCATTGATGTCATCTTGCAGCCTATCAG  492

seq1  CTGTAAAAAGGATGGGCTGTGTACTGTCTCTCTCACACTTGCTAGGGTTC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAAAAGGATGGGCTGTGTACTGTCTCTCTCACACTTGCTAGGGTTC  542

seq1  TCTACTAAGAATGGTAGGGCTGACTTCAGGCTTCAGCAGGAGCTGAGGAC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTAAGAATGGTAGGGCTGACTTCAGGCTTCAGCAGGAGCTGAGGAC  592

seq1  CCCTCAGGGGCTTAAACGCTCTTTTTAAACTCTCAGAAATCGAACACATG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGGGGCTTAAACGCTCTTTTTAAACTCTCAGAAATCGAACACATG  642

seq1  AAGCTCTGAAAGATTATGTCTTCAACATGAGCATGCTGGCGAGGACAGCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTGAAAGATTATGTCTTCAACATGAGCATGCTGGCGAGGACAGCA  692

seq1  CTGACTCAGGTGATCGCTGTACACTTACTTTATTCAACGATTTTTTTTTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCAGGTGATCGCTGTACACTTACTTTATTCAACGATTTTTTTTTC  742

seq1  TATTCTTTTCTTTCTTTCCAAACTTCTTTTATTATTCCCCCCACAGCCTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTTCTTTCTTTCCAAACTTCTTTTATTATTCCCCCCACAGCCTT  792

seq1  CATGCTGGCTTCTGTATTTGCACCTGAAGAAGAGTCACACGAGCTCTGTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGGCTTCTGTATTTGCACCTGAAGAAGAGTCACACGAGCTCTGTC  842

seq1  CAGATTTTTTTTTTGTTTTTGTTGTTTCTGTTTTTGTTTTGTTTGTTTGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTTTTTTTTGTTTTTGTTGTTTCTGTTTTTGTTTTGTTTGTTTGT  892

seq1  TTTGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTAATTCTGGCTTGTTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTAATTCTGGCTTGTTC  942

seq1  ACTGTATCTGAAGCTCATCTGTTCTGTCTCTCTAGCAATCCAAGGAATCT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATCTGAAGCTCATCTGTTCTGTCTCTCTAGCAATCCAAGGAATCT  992

seq1  AAATGGCCCCCGTGCCTCAAGCTCTCCATGTTGGGTCTACAGATACGTGT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCCCCCGTGCCTCAAGCTCTCCATGTTGGGTCTACAGATACGTGT  1042

seq1  ACAGTTTTCTCTGTATTCAAACAGGGACGTTCCCCAAGTCTCAGGGAATT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTTCTCTGTATTCAAACAGGGACGTTCCCCAAGTCTCAGGGAATT  1092

seq1  C  1095
      |
seq2  C  1093

seq1: chr15_19583279_19584356
seq2: B6Ng01-013O07.g_68_1136

seq1  GAATTCTCTATGTCTTACGAGGCCATTGTGTCCACAGTTCCAATAAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATGTCTTACGAGGCCATTGTGTCCACAGTTCCAATAAAAAG  50

seq1  AACCATTTATCAAGGAGAGTAGGTAGTTTGGCCATGTACTATCCCCTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTTATCAAGGAGAGTAGGTAGTTTGGCCATGTACTATCCCCTCAA  100

seq1  GGCATGCTGTCAACTGGTGGTTGAACCTCATCAGCATATTGATCATGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCTGTCAACTGGTGGTTGAACCTCATCAGCATATTGATCATGGGT  150

seq1  TTGGAACTACTCTAAGGATGGTTTTATCTTTTTCAATATATATATTACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACTACTCTAAGGATGGTTTTATCTTTTTCAATATATATATTACTG  200

seq1  TTTCCAAAAGAAATTATGCTTTTCCTTGACAACAGCTATAAGACAAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAAAGAAATTATGCTTTTCCTTGACAACAGCTATAAGACAAAAAT  250

seq1  TCAAACTAAATCGAAGGAGGGATAGTGAGTTTTTTAACATCTGGATGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTAAATCGAAGGAGGGATAGTGAGTTTTTTAACATCTGGATGACA  300

seq1  GTCTATTGTTGAGCAATAAACAGACAGAGCATATCATAAATCATAGCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTGTTGAGCAATAAACAGACAGAGCATATCATAAATCATAGCCAG  350

seq1  GCAACATAATTGCATACTTTACAGAACTCTAAACTTAGATGTTAGCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATAATTGCATACTTTACAGAACTCTAAACTTAGATGTTAGCTTTT  400

seq1  TTATATTCATTAGATTTACTATAATATATTTCTTTGAAGGCCTTCTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTCATTAGATTTACTATAATATATTTCTTTGAAGGCCTTCTTTAA  450

seq1  TTTAGTGGAAAAATACATGATCACATTCATATGGAAGAAAACAGTTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGGAAAAATACATGATCACATTCATATGGAAGAAAACAGTTCTGC  500

seq1  AACCATCAGATACACATATAACACTATCAATGAACTAGTGTTAGACATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCAGATACACATATAACACTATCAATGAACTAGTGTTAGACATAT  550

seq1  TAAGGCATCTTTAAATTGGTTCTCTTTGGATAAAATTAAGGGGAAATAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCATCTTTAAATTGGTTCTCTTTGGATAAAATTAAGGGGAAATAGT  600

seq1  GTAATAAGTTAAGAATTTTCATAATTATTAAAATTAAATCTTGTTAATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAAGTTAAGAATTTTCATAATTATTAAAATTAAATCTTGTTAATAG  650

seq1  AGTCTAATGGATTTTATTGAACAATATTAATTTACTCATAAAATCCATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAATGGATTTTATTGAACAATATTAATTTACTCATAAAATCCATTG  700

seq1  ATTTAAACTAAAATTTCTGATGAAAACAAGATTGTAGGACCTTCTTTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAACTAAAATTTCTGATGAAAACAAGATTGTAGGACCTTCTTTATG  750

seq1  CCATTTTAAACTATGGAATAA-TTTGGCATTAGAAGTATTGACAAAACAT  799
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCATTTTAAACTATGGAATAATTTTGGCATTAGAAGTATTGACAAAACAT  800

seq1  AGTTATACGATAATGTTAAGGTTATAGCATTAAACTATGAAATTCAGTAG  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGTTATACGATAATGTTAAGGTTATAGCATTTAACTATGAAATTCAGTAG  850

seq1  C-TTTAGATTAACATAAATAACATTGTAAAAAGAGATTCTTTTAATTTT-  897
      | |||||| |||||||||||||||||||||||||||||||||||||||| 
seq2  CTTTTAGA-TAACATAAATAACATTGTAAAAAGAGATTCTTTTAATTTTA  899

seq1  AAATAAATGAACCTTTAAAGGGGATATTATATTTCACATCATTTCTATCT  947
      |||||||||||||||| || ||||||||||||||||||||||||||||||
seq2  AAATAAATGAACCTTTTAAAGGGATATTATATTTCACATCATTTCTATCT  949

seq1  TT-GAGTGTATACACGTGAAAATAACATTTGTTGTTATTTGTGAATCATC  996
      || || ||||||||||||||| ||||||||||||||||||||| ||||||
seq2  TTGGATTGTATACACGTGAAATTAACATTTGTTGTTATTTGTG-ATCATC  998

seq1  TTAGCCTCTCTGGAATGAAATCAACTTTTCCACAGTGAATGATGCTTTTT  1046
      ||||||||||||  |||||||||    || ||| ||| ||||||||||| 
seq2  TTAGCCTCTCTG--ATGAAATCA---CTTGCAC-GTG-ATGATGCTTTTG  1041

seq1  GATATTATGTTGAATTTAGCTTATATTTTCTT  1078
       ||| |||| |||||||||||  |||||||||
seq2  AATA-TATG-TGAATTTAGCT--TATTTTCTT  1069