BAC Information

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BAC

Clone NameB6Ng01-018A20
Chromosome15 (Build37)
Map Location 60,090,572 - 60,208,141
singlet/doubletdoublet
Overlap geneLOC623048
Upstream geneSqle, E430025E21Rik, Nsmce2, Trib1, LOC665602, EG632248, LOC665613, 4933412E24Rik, LOC100040266
Downstream geneLOC211832, LOC623094, EG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018A20.bB6Ng01-018A20.g
ACCDH851558DH851559
length269557
definitionDH851558|Mus musculus domesticus DNA, BAC clone: B6Ng01-018A20, 5' end.DH851559|Mus musculus domesticus DNA, BAC clone: B6Ng01-018A20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,207,874 - 60,208,141)(60,090,572 - 60,091,133)
sequence
tattaagctttgctggccttcaatcttactgtgatttggttgggtttttt
gtttgtttgtttgtttgtttgggggttttttgtttctttttttttgttta
tttgtttatttctttttagtctataaattgagacagcaaaaacatttcaa
caggagaacttactaaattttcacagatttctatgttttgttcatttctt
ctgtctttgtaaagttatggctaactctatatgctgcacctaccatgcaa
agaatatagtaagaagagt
gaattcatacttgtgtccttaaaagtgagcttgtattggtgcctgtagag
ataggctgatctctgtcttctccctatggctatattgattaattaaagtc
ctttctggtctttcatcaataattttatctttctggtgggtacatagatg
gacctgatggggtgataccattataattggacctctagcttgggtttcca
gtagcagagcaaatatatttaggacaaatgcaatggtaggacttggattt
tccacgctgaaatgtactgcaaaagccacatgtcattcatgcacgtctgc
atacacaaacacatgaccatacatatgtgatcatacaagtaggccaaaca
cacacacacacacaaacacacgcagagagagagagagagagagagagaga
gagagagagagagagagagagagagagagagagagagagagagagggaga
gagagagatcataacatgattatatgataaaaaaaactaggccagaatct
caaaacggtacaaaaatttttgcaaagtttattgtggcaaatatttaggc
ctttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_60207874_60208141
seq2: B6Ng01-018A20.b_49_316 (reverse)

seq1  CTCTTCTTACTATATTCTTTGCATGGTAGCTGCAGCATATAGAGTTAGCC  50
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTCTTCTTACTATATTCTTTGCATGGTAGGTGCAGCATATAGAGTTAGCC  50

seq1  ATAACTTTCCAAAGACAGAAGAAATGAACAAAACCTTGAAATCTGTGAAA  100
      |||||||| ||||||||||||||||||||||||| | |||||||||||||
seq2  ATAACTTTACAAAGACAGAAGAAATGAACAAAACATAGAAATCTGTGAAA  100

seq1  ATTTAGTAAGTTCTCCTGTTGAAATGTTTTTGCTGTCTCAATTTATAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTAAGTTCTCCTGTTGAAATGTTTTTGCTGTCTCAATTTATAGAC  150

seq1  TAAAAAGAAATAAACAAATAAACAAAAAAAAAGAAACAAAAAACCCCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAAATAAACAAATAAACAAAAAAAAAGAAACAAAAAACCCCCAA  200

seq1  ACAAACAAACAAACAAACAAAAAACCCAACCAAATCACAGTAAGATTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAACAAACAAAAAACCCAACCAAATCACAGTAAGATTGAA  250

seq1  GGCCAGCAAAGCTTAATA  268
      ||||||||||||||||||
seq2  GGCCAGCAAAGCTTAATA  268

seq1: chr15_60090572_60091133
seq2: B6Ng01-018A20.g_66_622

seq1  GAATTCATACTTGTGTCCTTAAAAGTGAGCTTGTATTGGTGCCTGTAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACTTGTGTCCTTAAAAGTGAGCTTGTATTGGTGCCTGTAGAG  50

seq1  ATAGGCTGATCTCTGTCTTCTCCCTATGGCTATATTGATTAATTAAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCTGATCTCTGTCTTCTCCCTATGGCTATATTGATTAATTAAAGTC  100

seq1  CTTTCTGGTCTTTCATCAATAATTTTATCTTTCTGGTGGGTACATAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGGTCTTTCATCAATAATTTTATCTTTCTGGTGGGTACATAGATG  150

seq1  GACCTGATGGGGTGATACCATTATAATTGGACCTCTAGCTTGGGTTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGATGGGGTGATACCATTATAATTGGACCTCTAGCTTGGGTTTCCA  200

seq1  GTAGCAGAGCAAATATATTTAGGACAAATGCAATGGTAGGACTTGGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGAGCAAATATATTTAGGACAAATGCAATGGTAGGACTTGGATTT  250

seq1  TCCACGCTGAAATGTACTGCAAAAGCCACATGTCATTCATGCACGTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACGCTGAAATGTACTGCAAAAGCCACATGTCATTCATGCACGTCTGC  300

seq1  ATACACAAACACATGACCATACATATGTGATCATACAAGTAGGCCAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAAACACATGACCATACATATGTGATCATACAAGTAGGCCAAACA  350

seq1  CACACACACACACAAACACACGCAGAGAGAGAGAGAGAGAGAGAGAGAGA  400
      |||||||||||||||||||||||    |||||||||||||||||||||||
seq2  CACACACACACACAAACACACGC----AGAGAGAGAGAGAGAGAGAGAGA  396

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGG  446

seq1  GAGGGAGAGAGAGAATAACATAACTATATAAAAAAGAAAACGAGTCCAAC  500
      ||| ||||||||  ||||||| | ||||| | ||| ||||| || |||  
seq2  GAGAGAGAGAGATCATAACATGATTATATGATAAAAAAAACTAGGCCAGA  496

seq1  AACTCACAAAGGGAGAAAAATATTTGCAAAAATTTCTGTGCCAAAATAAT  550
      | |||| || || | |||||| ||||||||  ||  |||| | ||||| |
seq2  ATCTCAAAACGGTACAAAAATTTTTGCAAAGTTTATTGTGGC-AAATATT  545

seq1  AAGGCCTTTGTT  562
       |||||||||||
seq2  TAGGCCTTTGTT  557