BAC Information

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BAC

Clone NameB6Ng01-019M23
Chromosome15 (Build37)
Map Location 50,264,817 - 50,425,683
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039539, LOC665160
Downstream geneTrps1, LOC100039644, LOC100039662
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019M23.bB6Ng01-019M23.g
ACCDH852791DH852792
length1,0771,119
definitionDH852791|Mus musculus domesticus DNA, BAC clone: B6Ng01-019M23, 5' end.DH852792|Mus musculus domesticus DNA, BAC clone: B6Ng01-019M23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,424,597 - 50,425,683)(50,264,817 - 50,265,943)
sequence
gaattcagtcagacattgtgttattttgggttgtaactatagagacctca
cgtacactatgtgcataattcataaacaaagataaagatttcgttgcaca
agataaagcagttatacacctggttagattttgttctttaaaatgaatcg
ttgaatactctatcctcttcacttccccaaattttgatcaagtttagaaa
agtccacaataaccatgaagaggctcagaaaagttgttcagcttttctcc
attaaggctttggttttgtttaatactaataaattaattatttttttaaa
agtctttattctaggtaacatacatattgtcaataagaatgagataagag
atagtgcattcaaacctagttttcaataattaggatcttaaagttaccta
ttactcaaagctgctcttttcaaatagagttggataacatgaaacaatag
aaaacaactataaactatgcagtcctcagagaattttttaaaattaagtt
tttctcttaaggatgtttggattaattattctaagatgtaacttagataa
aagtactaatgtggaattcttcagactgatacatttctgttttgatgttt
tttcttttgtttcggctttctagatatctgaggacacattccatggcctc
cggcaaatttggattggtggagggctcaccatctccaccgagagaccgtt
ggtgcttaaggcaatttctctctctgtcttacactgtggctcccccaatt
actttttgtaatgacagtgaaacatctttaaagacaacacatgagaattt
aaccgattttcacttcatatgaaaaaattcgaccagatgcactcctgacc
ttgtatgcctcagggtagtccacatgcgaggatggggaacccgtaaaaac
taaatcatctatttcatcttaaaagtcctctttcataaggaaaaaaatca
cactgtgtagaagcaacattagcctgaactgattaacagggaaacctgtt
gtgtttggaacaacggtcaagacatacttatgcagctctccctatagaat
gacacagaagtctggctatcagaaaac
gaattcactctgtagaccaggctggcctcagaaattcacctgcctctacc
tcccaagtgctagaattaaaggtgtgtgccatcaccgcctggctagaatg
tgcttttctaacagaacaattttaatgaacaatcagaaaaaaaattcttc
atatcatgacaatgaggtactaaagagctcattatatattggtatgtaga
gctgaataggacctggactataaattagaattaccataaaatatagtttt
cctttgaaaagagtttaaagaatttcatataccaaaaagtcttctgtctg
atataaggcaaatatccttaacaaattaatcaacatctttctttaaaaaa
tacttcatgaacaaatgcattcattttcttaagataatctcaagtgtggt
cttactgacctaaaatgtatataacctgttatatctctaaatgctgtcca
tcattgtctaatgcagctggtctaatttctactatcatcatcaacagttc
aaaactcttagggatccacttctttatcaggtcatcatatccaacagttt
gtgttttttccattctgaaggacaaaaaaggtctttttacagttttaatc
tcattttccgattgactagtaaactaatttctcagaatacatattgccac
ttccaaactaattcataaattatacatttattctaattttatgaattacc
tgcacatggctagatggctaacagaaagaaatttcttgaaattcacttga
ttcaatgccctggtatttgtttggagataaggaatcccctatacataaat
agattaaagtcagttagacaataaaataaagagacaaatgacctagggtg
ctgtttacaataaataatatagagtctaccattgatgtccattgatcagt
ctcatgaactcatgagtgtatttaagatatagaacaaagagagaaagatc
attaaagaaaaatattttgtccaaatttcaaagaacctgaaaactaaaag
ggggagttatttttctcagttctgtaatcgtaattaaataccctgggaat
tctggcggttgtgcatctttccccgaacccactcagcaaattgcaagatc
tacagaacttgcctgggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_50424597_50425683
seq2: B6Ng01-019M23.b_44_1120 (reverse)

seq1  GTTTTCTGATAGCCATACTACT-TGTCA-TCTAGAGTGGAGAAGCAGGAT  48
      ||||||||||||||| ||| || ||||| |||| || |||| ||| | ||
seq2  GTTTTCTGATAGCCAGACTTCTGTGTCATTCTATAG-GGAG-AGCTGCAT  48

seq1  AAGTAATGTCTT-ACCCTTGTTCCATAGCAACAACAGGTTTCCCTGTTAA  97
      |||| ||||||| ||| |||||||| |   ||||||||||||||||||||
seq2  AAGT-ATGTCTTGACCGTTGTTCCAAA--CACAACAGGTTTCCCTGTTAA  95

seq1  TTAGATACAGGCTAATTGTTGTTTATAAACATTGTGATTGTTTTTCATAT  147
      | || | |||||||| ||||| || || ||| ||||||| |||| | |||
seq2  TCAG-TTCAGGCTAA-TGTTGCTTCTACACAGTGTGATTTTTTTCCTTAT  143

seq1  GTAAGATGACTTATAAGATGAAAAAGGAGATTTTATTTTTACGTGATTCC  197
      | |||| ||||| |||||||||| ||  |||||  |||||||| | ||||
seq2  GAAAGAGGACTTTTAAGATGAAATAGATGATTTAGTTTTTACG-GGTTCC  192

seq1  ACATCCTCAAAGGATGACAAACCCAGAAGCAAGAGAAAGCAAGGAATGCA  247
       |||||||  | |  |||  |||| || || | | || |  |||| ||||
seq2  CCATCCTCGCATGTGGAC-TACCCTGAGGC-ATACAAGGTCAGGAGTGCA  240

seq1  TCTGGACGAATGTTCTTTTCTATGAAGTGAAAATCGTTGAAATTCTCCTT  297
      ||||| ||||  || |||  |||||||||||||||| | ||||||| | |
seq2  TCTGGTCGAA--TTTTTTCATATGAAGTGAAAATCGGTTAAATTCT-CAT  287

seq1  GCGTTGTCTTTCAAACTGTTTCACTGCCATTTTAAAAAGTAATTTGGTGA  347
      | ||||||||| ||  |||||||||| ||||  ||||||||||| || ||
seq2  GTGTTGTCTTTAAAGATGTTTCACTGTCATTACAAAAAGTAATTGGGGGA  337

seq1  ACCACAGTGTAAGACATAGAGAGAAATTGCATTTAGTACCAACTGTTTCC  397
       ||||||||||||||| ||||||||||||| || || |||||| || || 
seq2  GCCACAGTGTAAGACAGAGAGAGAAATTGCCTTAAGCACCAACGGTCTCT  387

seq1  TGGTGAAATTGTTTAGCCCTCCAACAATACAAAATTACCGGAGGACATTG  447
       |||| |  || | ||||||||| |||| |||| || ||||||| ||| |
seq2  CGGTGGAGATGGTGAGCCCTCCACCAATCCAAATTTGCCGGAGGCCATGG  437

seq1  AATTACTACTCAGATATCTAGAAAACCAAAAAAAAAAAAAAAAAAAAAAA  497
      |||   | |||||||||||||||| || ||| |||| |||||| |  |||
seq2  AATGTGTCCTCAGATATCTAGAAAGCCGAAACAAAAGAAAAAACATCAAA  487

seq1  AAAGAAATGTATCAGTCTGAAGAATTCCACATTAGTATTTTTATCTAAGT  547
      | ||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACAGAAATGTATCAGTCTGAAGAATTCCACATTAGTACTTTTATCTAAGT  537

seq1  TACATCTTAGAATAATTAATCCAAACATCCTTAAGAGAAAAACTTAATTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTTAGAATAATTAATCCAAACATCCTTAAGAGAAAAACTTAATTT  587

seq1  TAAAAAATTCTCTGAGGACTGCATAGTTTATAGTTGTTTTCTATTGTTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATTCTCTGAGGACTGCATAGTTTATAGTTGTTTTCTATTGTTTC  637

seq1  ATGTTATCCAACTCTATTTGAAAAGAGCAGCTTTGAGTAATAGGTAACTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATCCAACTCTATTTGAAAAGAGCAGCTTTGAGTAATAGGTAACTT  687

seq1  TAAGATCCTAATTATTGAAAACTAGGTTTGAATGCACTATCTCTTATATC  747
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAAGATCCTAATTATTGAAAACTAGGTTTGAATGCACTATCTCTTATCTC  737

seq1  ATTCTTATTGACAATATGTATGTTACCTAGAATAAAGACTTTTAAAAAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTATTGACAATATGTATGTTACCTAGAATAAAGACTTTTAAAAAAA  787

seq1  TAATTAATTTATTAGTATTAAACAAAACCAAAGCCTTAATGGAGAAAAGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATTTATTAGTATTAAACAAAACCAAAGCCTTAATGGAGAAAAGC  837

seq1  TGAACAACTTTTCTGAGCCTCTTCATGGTTATTGTGGACTTTTCTAAACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAACTTTTCTGAGCCTCTTCATGGTTATTGTGGACTTTTCTAAACT  887

seq1  TGATCAAAATTTGGGGAAGTGAAGAGGATAGAGTATTCAACGATTCATTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAAAATTTGGGGAAGTGAAGAGGATAGAGTATTCAACGATTCATTT  937

seq1  TAAAGAACAAAATCTAACCAGGTGTATAACTGCTTTATCTTGTGCAACGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAACAAAATCTAACCAGGTGTATAACTGCTTTATCTTGTGCAACGA  987

seq1  AATCTTTATCTTTGTTTATGAATTATGCACATAGTGTACGTGAGGTCTCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTATCTTTGTTTATGAATTATGCACATAGTGTACGTGAGGTCTCT  1037

seq1  ATAGTTACAACACAAAATAACACAATGTCTGACTGAATTC  1087
      ||||||||||| ||||||||||||||||||||||||||||
seq2  ATAGTTACAACCCAAAATAACACAATGTCTGACTGAATTC  1077

seq1: chr15_50264817_50265943
seq2: B6Ng01-019M23.g_68_1186

seq1  GAATTCACTCTGTAGACCAGGCTGGCCTCAGAAATTCACCTGCCTCTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGGCCTCAGAAATTCACCTGCCTCTACC  50

seq1  TCCCAAGTGCTAGAATTAAAGGTGTGTGCCATCACCGCCTGGCTAGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGTGCTAGAATTAAAGGTGTGTGCCATCACCGCCTGGCTAGAATG  100

seq1  TGCTTTTCTAACAGAACAATTTTAATGAACAATCAGAAAAAAAATTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCTAACAGAACAATTTTAATGAACAATCAGAAAAAAAATTCTTC  150

seq1  ATATCATGACAATGAGGTACTAAAGAGCTCATTATATATTGGTATGTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATGACAATGAGGTACTAAAGAGCTCATTATATATTGGTATGTAGA  200

seq1  GCTGAATAGGACCTGGACTATAAATTAGAATTACCATAAAATAGAGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCTGAATAGGACCTGGACTATAAATTAGAATTACCATAAAATATAGTTTT  250

seq1  CCTTTGAAAAGAGTTTAAAGAATTTCATATACCAAAAAGTCTTCTGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGAAAAGAGTTTAAAGAATTTCATATACCAAAAAGTCTTCTGTCTG  300

seq1  ATATAAGGCAAATATCCTTAACAAATTAATCAACATCTTTCTTTAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGGCAAATATCCTTAACAAATTAATCAACATCTTTCTTTAAAAAA  350

seq1  TACTTCATGAACAAATGCATTCATTTTCTTAAGATAATCTCAAGTGTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCATGAACAAATGCATTCATTTTCTTAAGATAATCTCAAGTGTGGT  400

seq1  CTTACTGACCTAAAATGTATATAACCTGTTATATCTCTAAATGCTGTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGACCTAAAATGTATATAACCTGTTATATCTCTAAATGCTGTCCA  450

seq1  TCATTGTCTAATGCAGCTGGTCTAATTTCTACTATCATCATCAACAGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTCTAATGCAGCTGGTCTAATTTCTACTATCATCATCAACAGTTC  500

seq1  AAAACTCTTAGGGATCCACTTCTTTATCAGGTCATCATATCCAACAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTTAGGGATCCACTTCTTTATCAGGTCATCATATCCAACAGTTT  550

seq1  GTGTTTTTTCCATTCTGAAGGACAAAAAAGGTCTTTTTACAGTTTTAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTTCCATTCTGAAGGACAAAAAAGGTCTTTTTACAGTTTTAATC  600

seq1  TCATTTTCCGATTGACTAGTAAACTAATTTCTCAGAATACATATTGCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCCGATTGACTAGTAAACTAATTTCTCAGAATACATATTGCCAC  650

seq1  TTCCAAACTAATTCATAAATTATACATTTATTCTAATTTTATGAATTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAACTAATTCATAAATTATACATTTATTCTAATTTTATGAATTACC  700

seq1  TGCACATGGCTAGATGGCTAACAGAAAGAAATTTCTTGAAATTCACTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATGGCTAGATGGCTAACAGAAAGAAATTTCTTGAAATTCACTTGA  750

seq1  TTCAATGCCCTGGTATTTTGTTTGGAGATAAGGAATCCCCTATACATAAA  800
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTCAATGCCCTGGTA-TTTGTTTGGAGATAAGGAATCCCCTATACATAAA  799

seq1  TAGATTAAAGTCAGTTAGACAAT-AAATAAAGAGACAAATGACCTAGGGT  849
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAGATTAAAGTCAGTTAGACAATAAAATAAAGAGACAAATGACCTAGGGT  849

seq1  GCTGTTTACAATAAAATAATTTAGAGTCTACCATTGATGTCCATTGATCA  899
      |||||||||||| ||||||| |||||||||||||||||||||||||||||
seq2  GCTGTTTACAAT-AAATAATATAGAGTCTACCATTGATGTCCATTGATCA  898

seq1  GTCTCATGAACTCATGAGTGTATTTAAGATATAGAACAAGGAGAGAAAGA  949
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTCTCATGAACTCATGAGTGTATTTAAGATATAGAACAAAGAGAGAAAGA  948

seq1  TCATTAAAAGAAAAATATTTTGTCCAAATTTCAAAGACACTGAAAACTAA  999
      ||||| |||||||||||||||||||||||||||||||  |||||||||||
seq2  TCATT-AAAGAAAAATATTTTGTCCAAATTTCAAAGAACCTGAAAACTAA  997

seq1  AAGGTGTA-TTATTTTTCTCAGTTTCTGTAAATCGTTATTACATTACACT  1048
      |||| | | ||||||||||||| |||||| |||||| |||| | ||| ||
seq2  AAGGGGGAGTTATTTTTCTCAG-TTCTGT-AATCGTAATTA-AATACCCT  1044

seq1  -GGAATTCCTGCAGTTGTGCCATCTTTCCCCCTGACCCACTCAGCAGTTG  1097
       |||||||  || |||||| ||||||| ||||  ||||||||||||  | 
seq2  GGGAATTCTGGCGGTTGTG-CATCTTT-CCCCGAACCCACTCAGCAAATT  1092

seq1  GCAAGATTCTACAGGACTTTGCCTGTGGAG  1127
      |||||| ||||||| || ||||||| ||||
seq2  GCAAGA-TCTACAGAAC-TTGCCTG-GGAG  1119