BAC Information

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BAC

Clone NameB6Ng01-023J10
Chromosome15 (Build37)
Map Location 31,533,412 - 31,671,636
singlet/doubletdoublet
Overlap geneA930016P21Rik, LOC667231
Upstream geneCtnnd2, 9630009A06Rik, Dap, EG625796, 5730557B15Rik, Ropn1l, LOC622810, March6, Cmbl, Cct5
Downstream geneTas2r119, 0610007N19Rik, Sema5a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023J10.bB6Ng01-023J10.g
ACCDH855468DH855469
length721991
definitionDH855468|Mus musculus domesticus DNA, BAC clone: B6Ng01-023J10, 5' end.DH855469|Mus musculus domesticus DNA, BAC clone: B6Ng01-023J10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,533,412 - 31,534,131)(31,671,106 - 31,671,636)
sequence
gaattctttctttttttaaaaaagggatttatttattattatacataagt
acactgtagctgactttggatgcaccagaagagggtgtcagatctgatta
ctggtggttgtgagccaccatgtggttgctggaatttgaactcgggatct
ttggaagagcagtcagtgctcttaccggctgagccatctcgccagccccc
cagaaaaaattcttatttaaataataatacttaggttcatctgtaaggta
ctggttaggagcaacatggatgaatccagaggatatcattttaagtgtag
taagatggtgagagaccacatactgtatgtgtgtgcatatttatgtgtat
atttgcatggtcctgtgtgtgtgcaggagttccatatgtgtactcatgta
ggccacagtttgatgtaggtatttctgttgtagtccacttaatttttttg
ggatggtcactcaccgaccttgcctgtttttgcgaggctggcttgacagc
cagcttctgggatttgtcatcaccttccagtgctgtggttgcgcctgtct
tttccatgggtgctgggaatctgaacagcaagcactctgcccactgagct
ctccctggcctttgcaagctagttgatataagtcaccttttgaagacaat
tagtgtaagtccgaagttgaggaagtagagactaaacttagtggtactta
tggtgggtggcagagggtgga
gaattcattaaactctcatttctgaaaattcaacaaaatcaactgaagtg
catgcagcttgctgtgcgtgctgccatggctccctggaaatgatcccttc
caagacacagagctcagttctgcatgctttctggtacactccaaaaagca
tcaaagggtagggtgccaacttgcctttggaccctctgtaacaaaacatg
acttttcttaaactatctttgcatgcttaattatctttttacaaagtagt
agtagtaataataataataatgatgatgatgaattacagaaaaatatcaa
acattaaagttaatcctttttaactactttttatttcagaatttcatata
tgtttaccatatgttttgatcaagctacctctgaacccctctcctccaat
tccttatttttccctcccaacttcctgtgctttgttcaaataattgttca
agatcaagggcctccacataaaaccagatacactgaaactaatagaagag
aaagtggggaagatccttgaacacttgggcacaggagaaattttcctgag
cagagcaccagtggcttatactctaaatcgacaataaacaaatggggcct
gataaaattgcaaagcttctgtaaggcaaaggacactgtcaataggacaa
aacagcaactaacagattaggaaaaattctttaccaatcctacatcaaat
aaagggctaatatccaatatatacagagaactcaagaagttagactccag
agaactaaataaccctattaaaaaatgaggtacagagataaaaaattttc
aactgaggaatatcgaatggctgagaagcacctaaccaaatgttcaacat
ccttagtcatcaggggaatgcaaatcaaaacaaccctgagattccacctc
acgccagtcaaatatctaaaatcaaaactcagtgacacagatgctggcag
gatgtgagaaggagacactcctccattgctggtggatttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_31533412_31534131
seq2: B6Ng01-023J10.b_42_762

seq1  GAATTCTTTCTTTTTTTAAAAAAGGGATTTATTTATTATTATACATAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTTTTTTAAAAAAGGGATTTATTTATTATTATACATAAGT  50

seq1  ACACTGTAGCTGACTTTGGATGCACCAGAAGAGGGTGTCAGATCTGATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTAGCTGACTTTGGATGCACCAGAAGAGGGTGTCAGATCTGATTA  100

seq1  CTGGTGGTTGTGAGCCACCATGTGGTTGCTGGAATTTGAACTCGGGATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGTTGTGAGCCACCATGTGGTTGCTGGAATTTGAACTCGGGATCT  150

seq1  TTGGAAGAGCAGTCAGTGCTCTTACCGGCTGAGCCATCTCGCCAGCCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGAGCAGTCAGTGCTCTTACCGGCTGAGCCATCTCGCCAGCCCCC  200

seq1  CAGAAAAAATTCTTATTTAAATAATAATACTTAGGTTCATCTGTAAGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAATTCTTATTTAAATAATAATACTTAGGTTCATCTGTAAGGTA  250

seq1  CTGGTTAGGAGCAACATGGATGAATCCAGAGGATATCATTTTAAGTGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTAGGAGCAACATGGATGAATCCAGAGGATATCATTTTAAGTGTAG  300

seq1  TAAGATGGTGAGAGACCACATACTGTATGTGTGTGCATATTTATGTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGGTGAGAGACCACATACTGTATGTGTGTGCATATTTATGTGTAT  350

seq1  ATTTGCATGGTCCTGTGTGTGTGCAGGAGTTCCATATGTGTACTCATGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATGGTCCTGTGTGTGTGCAGGAGTTCCATATGTGTACTCATGTA  400

seq1  GGCCACAGTTTGATGTAGGTATTTCTGTTGTAGTCCACTTAATTTTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACAGTTTGATGTAGGTATTTCTGTTGTAGTCCACTTAATTTTTTTG  450

seq1  GGATGGTCACTCACCGACCTTGCCTGTTTTTGCGAGGCTGGCTTGACAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTCACTCACCGACCTTGCCTGTTTTTGCGAGGCTGGCTTGACAGC  500

seq1  CAGCTTCTGGGATTTGTCATCACCTTCCAGTGCTGTGGTTGCGCCTGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCTGGGATTTGTCATCACCTTCCAGTGCTGTGGTTGCGCCTGTCT  550

seq1  TTTCCATGGGTGCTGGGAATCTGAACAGCAAGCACTCTGCCCACTGAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGGGTGCTGGGAATCTGAACAGCAAGCACTCTGCCCACTGAGCT  600

seq1  CTCCCTGGCCTTTGCAAGCTAGTTGATATAAGTCACC-TTTGAAGACAAT  649
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTCCCTGGCCTTTGCAAGCTAGTTGATATAAGTCACCTTTTGAAGACAAT  650

seq1  TAGTGTAAGTCCGAAGTTGAGGAAGTAGAGACTAAACGTAGTGGTACTTA  699
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TAGTGTAAGTCCGAAGTTGAGGAAGTAGAGACTAAACTTAGTGGTACTTA  700

seq1  GGGTGGGTGGCAGAGGGTGGA  720
       ||||||||||||||||||||
seq2  TGGTGGGTGGCAGAGGGTGGA  721

seq1: chr15_31671106_31671636
seq2: B6Ng01-023J10.g_69_599 (reverse)

seq1  TGCCCAAGTGTTCAAGGATCTTCCCCACTTTCTCTTCTATTAGTTTCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAAGTGTTCAAGGATCTTCCCCACTTTCTCTTCTATTAGTTTCAGT  50

seq1  GTATCTGGTTTTATGTGGAGGCCCTTGATCTTGAACAATTATTTGAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGGTTTTATGTGGAGGCCCTTGATCTTGAACAATTATTTGAACAA  100

seq1  AGCACAGGAAGTTGGGAGGGAAAAATAAGGAATTGGAGGAGAGGGGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGGAAGTTGGGAGGGAAAAATAAGGAATTGGAGGAGAGGGGTTCA  150

seq1  GAGGTAGCTTGATCAAAACATATGGTAAACATATATGAAATTCTGAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGCTTGATCAAAACATATGGTAAACATATATGAAATTCTGAAATA  200

seq1  AAAAGTAGTTAAAAAGGATTAACTTTAATGTTTGATATTTTTCTGTAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAGTTAAAAAGGATTAACTTTAATGTTTGATATTTTTCTGTAATT  250

seq1  CATCATCATCATTATTATTATTATTACTACTACTACTTTGTAAAAAGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCATCATTATTATTATTATTACTACTACTACTTTGTAAAAAGATA  300

seq1  ATTAAGCATGCAAAGATAGTTTAAGAAAAGTCATGTTTTGTTACAGAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGCATGCAAAGATAGTTTAAGAAAAGTCATGTTTTGTTACAGAGGG  350

seq1  TCCAAAGGCAAGTTGGCACCCTACCCTTTGATGCTTTTTGGAGTGTACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGGCAAGTTGGCACCCTACCCTTTGATGCTTTTTGGAGTGTACCA  400

seq1  GAAAGCATGCAGAACTGAGCTCTGTGTCTTGGAAGGGATCATTTCCAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCATGCAGAACTGAGCTCTGTGTCTTGGAAGGGATCATTTCCAGGG  450

seq1  AGCCATGGCAGCACGCACAGCAAGCTGCATGCACTTCAGTTGATTTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGGCAGCACGCACAGCAAGCTGCATGCACTTCAGTTGATTTTGTT  500

seq1  GAATTTTCAGAAATGAGAGTTTAATGAATTC  531
      |||||||||||||||||||||||||||||||
seq2  GAATTTTCAGAAATGAGAGTTTAATGAATTC  531