BAC Information

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BAC

Clone NameB6Ng01-023K20
Chromosome15 (Build37)
Map Location 49,718,452 - 49,873,421
singlet/doubletdoublet
Overlap geneLOC665160
Upstream geneEG665146, LOC100039600, LOC100039539
Downstream geneTrps1, LOC100039644
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023K20.bB6Ng01-023K20.g
ACCDH855527DH855528
length2961,116
definitionDH855527|Mus musculus domesticus DNA, BAC clone: B6Ng01-023K20, 5' end.DH855528|Mus musculus domesticus DNA, BAC clone: B6Ng01-023K20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,873,126 - 49,873,421)(49,718,452 - 49,719,586)
sequence
gaattcctttcctaagaaaaattcctatgtgttctttatttctagagaat
cgtcttaacatcaatcatactttgttttgttactttaccttaatgatcta
ctgagaacaagttctttggttcactcagcagacttgtacagaaactcttg
tatatcatagttccttggggaattttcaaaaaggtgggttgagtcactga
gacttacatattttggcgttctcacaaggtttccaaagaaatggaaaatg
tctaaagatctatctaacattccgggggtgggagttggggtggggg
gaattcagcacaacacaaagtaatgaaaggagtgtattgggaactcaaaa
gcaaaaaaaaatcatttttttcattttaatttgtctgataccataatgac
tcataaaaattaagtatctagatatgtctaaggatgtttgaaagacaaac
agctaccaaatttaggaaataaatttaggagaaacaaatgggctaattta
tgactgagaatggtattacatagtaattatatcactatattagtgacaaa
acacatttaaattttttagtaggttggagctcatcaacttgaatattcac
caggaagttacaaaaaaaatgaggagtaaaattaagttatctatggagaa
aatattcacaaacggtgtatgtggcagatgtttcccaagcaatacacaat
aaattcaactcaaagctagtgattcttaaaaataaatcaaaatatccaaa
tgtatagatcatgaatgagatctgaaaatggcacactaataattgaaaag
atgttctctatcatatgtcatcacaatatttttgaaatataacgtatcac
tgaacaactattagaaagaccaaacctcaaaaacaagaaacatcaaattc
aggcacaagtgtagatcagaacaaaggtcatctctgctgtaggcatggta
acactgcacaaacacattcagaacactctgcagtatgtaacttgagtaaa
cttgatgataccgtgtttccgaactgcaaggatgcttctctctatacaaa
ggagctcgaaacttatgtccatatgaaacctcagtgtaggtgcttacagc
agttttttgtgttcttgccctatatggaaactaccaacatattcatcagt
atataaatagaccaatattacagttttggtagaactctaaaagtatattt
taaaaggcaacactcttcttagatttactttttttttttctagttgagaa
aatgtgactaaaaagcttcagtttgcatctcagtcttcaactttcacttt
aaagcaaacttcaggcacaataaaaagactaaccagtgcacaagtagaaa
agatattatgctgcatttgaagccatgcactgaagaggaatgaactgtga
ctaagatggacttgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_49873126_49873421
seq2: B6Ng01-023K20.b_29_324 (reverse)

seq1  CCCCCACCCCAACTCCCACCCCCGGAATGTTAGATAGATCTTTAGACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCCAACTCCCACCCCCGGAATGTTAGATAGATCTTTAGACATT  50

seq1  TTCCATTTCTTTGGAAACCTTGTGAGAACGCCAAAATATGTAAGTCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTCTTTGGAAACCTTGTGAGAACGCCAAAATATGTAAGTCTCAG  100

seq1  TGACTCAACCCACCTTTTTGAAAATTCCCCAAGGAACTATGATATACAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCAACCCACCTTTTTGAAAATTCCCCAAGGAACTATGATATACAAG  150

seq1  AGTTTCTGTACAAGTCTGCTGAGTGAACCAAAGAACTTGTTCTCAGTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTGTACAAGTCTGCTGAGTGAACCAAAGAACTTGTTCTCAGTAGA  200

seq1  TCATTAAGGTAAAGTAACAAAACAAAGTATGATTGATGTTAAGACGATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAGGTAAAGTAACAAAACAAAGTATGATTGATGTTAAGACGATTC  250

seq1  TCTAGAAATAAAGATCACATAGGAATTTTTCTTAGGAAAGGAATTC  296
      |||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTAGAAATAAAGAACACATAGGAATTTTTCTTAGGAAAGGAATTC  296

seq1: chr15_49718452_49719586
seq2: B6Ng01-023K20.g_70_1185

seq1  GAATTCAGCACAACACAAAGTAATGAAAGGAGTGTATTGGGAACTCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCACAACACAAAGTAATGAAAGGAGTGTATTGGGAACTCAAAA  50

seq1  GCAAAAAAAAATCATTTTTTTCATTTTAATTTGTCTGATACCATAATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAAAAATCATTTTTTTCATTTTAATTTGTCTGATACCATAATGAC  100

seq1  TCATAAAAATTAAGTATCTAGATATGTCTAAGGATGTTTGAAAGACAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAAATTAAGTATCTAGATATGTCTAAGGATGTTTGAAAGACAAAC  150

seq1  AGCTACCAAATTTAGGAAATAAATTTAGGAGAAACAAATGGGCTAATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACCAAATTTAGGAAATAAATTTAGGAGAAACAAATGGGCTAATTTA  200

seq1  TGACTGAGAATGGTATTACATAGTAATTATATCACTATATTAGTGACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAGAATGGTATTACATAGTAATTATATCACTATATTAGTGACAAA  250

seq1  ACACATTTAAATTTTTTAGTAGGTTGGAGCTCATCAACTTGAATATTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTTAAATTTTTTAGTAGGTTGGAGCTCATCAACTTGAATATTCAC  300

seq1  CAGGAAGTTACAAAAAAAATGAGGAGTAAAATTAAGTTATCTATGGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGTTACAAAAAAAATGAGGAGTAAAATTAAGTTATCTATGGAGAA  350

seq1  AATATTCACAAACGGTGTATGTGGCAGATGTTTCCCAAGCAATACACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCACAAACGGTGTATGTGGCAGATGTTTCCCAAGCAATACACAAT  400

seq1  AAATTCAACTCAAAGCTAGTGATTCTTAAAAATAAATCAAAATATCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAACTCAAAGCTAGTGATTCTTAAAAATAAATCAAAATATCCAAA  450

seq1  TGTATAGATCATGAATGAGATCTGAAAATGGCACACTAATAATTGAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGATCATGAATGAGATCTGAAAATGGCACACTAATAATTGAAAAG  500

seq1  ATGTTCTCTATCATATGTCATCACAATATTTTTGAAATATAACGTATCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTCTATCATATGTCATCACAATATTTTTGAAATATAACGTATCAC  550

seq1  TGAACAACTATTAGAAAGACCAAACCTCAAAAACAAGAAACATCAAATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAACTATTAGAAAGACCAAACCTCAAAAACAAGAAACATCAAATTC  600

seq1  AGGCACAAGTGTAGATCAGAACAAAGGTCATCTCTGCTGTAGGCATGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACAAGTGTAGATCAGAACAAAGGTCATCTCTGCTGTAGGCATGGTA  650

seq1  ACACTGCACAAACACATTCAGAACACTCTGCAGTATGTAACTTGAGTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCACAAACACATTCAGAACACTCTGCAGTATGTAACTTGAGTAAA  700

seq1  CTTGATGATACCGTGTTTCCGAACTGCAAGGATGCTTCTCTCTATACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGATACCGTGTTTCCGAACTGCAAGGATGCTTCTCTCTATACAAA  750

seq1  GGAGCTCGAAACTTATGTCCATATGAAACCTCAGTGTAGGTGCTTACAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCGAAACTTATGTCCATATGAAACCTCAGTGTAGGTGCTTACAGC  800

seq1  AGTTTTTTGTGTTCTTGCCCTATATGGAAACTACCAACATATTCATCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTTGTGTTCTTGCCCTATATGGAAACTACCAACATATTCATCAGT  850

seq1  ATATAAATAGACCAATATTACAGTTTTGGTAGAACTCTAAAAGTATATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATAGACCAATATTACAGTTTTGGTAGAACTCTAAAAGTATATTT  900

seq1  TAAAAGGCAACAACTCTTCTTAGATTTTACTTTTTTTTTTTCTAGTTGAG  950
      ||||||||||| |||||||||||| |||||||||||||||||||||||||
seq2  TAAAAGGCAAC-ACTCTTCTTAGA-TTTACTTTTTTTTTTTCTAGTTGAG  948

seq1  AAAAATTGTGACTAAAAAAGCTTCAAGTTTGCATCTCAGTTCTTCCAACT  1000
      ||||  ||||||| |||||||||| |||||||||||||| |||| |||||
seq2  AAAA--TGTGACT-AAAAAGCTTC-AGTTTGCATCTCAG-TCTT-CAACT  992

seq1  TTCAACTTTAAAGCAAACTTCAAGGCACAATAAAACAGACTAACCAGTGC  1050
      ||| ||||||||||||||||| ||||||||||||| ||||||||||||||
seq2  TTC-ACTTTAAAGCAAACTTC-AGGCACAATAAAA-AGACTAACCAGTGC  1039

seq1  ACAAGGTTAG-AAAGATATTTATGCTGCATTTGAGGCCCATGCAACTGAA  1099
      |||||  ||| ||||||| ||||||||||||||| | |||||| ||||||
seq2  ACAAG--TAGAAAAGATA-TTATGCTGCATTTGAAG-CCATGC-ACTGAA  1084

seq1  GAGGAATGACACTGTGACTTAGAGAAAGGACTTGCT  1135
      ||||||||| ||||||||| ||   | |||||||||
seq2  GAGGAATGA-ACTGTGACTAAG---ATGGACTTGCT  1116