BAC Information

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BAC

Clone NameB6Ng01-024D03
Chromosome15 (Build37)
Map Location 20,732,610 - 20,868,777
singlet/doubletdoublet
Overlap genenone
Upstream geneAcot10, LOC100040302
Downstream geneCdh12, LOC100040351
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024D03.bB6Ng01-024D03.g
ACCDH855904DH855905
length9271,064
definitionDH855904|Mus musculus domesticus DNA, BAC clone: B6Ng01-024D03, 5' end.DH855905|Mus musculus domesticus DNA, BAC clone: B6Ng01-024D03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,867,849 - 20,868,777)(20,732,610 - 20,733,685)
sequence
gaattccattcctttcttggtttatagacagattggctactgaactattc
aaatataattctttattaaatataaatttccaaagagttttacctttgtt
ccaaactgagctattctagcaatgctgctttgaacagtgattagcagggg
tagtaaagccacttctttcatacactgggagaacacaggagcctatcatc
tgttagcgccaattaggaatcacacttgccctaaccaccccaaccacctc
tgctttgttgtctgttctaaatctaagtcatctcattgattgaaaccagt
ctctattttgtctctggatagctgtctgagttatcagattggctaacgcg
cggaaatttggagttctcatacaatattcattgtaatacttaatcataca
catcactcacaaggcaaagacaaagcagtctaggtaaaataaacaaattt
tccagcatcaacccagaaaacccaaagaaggggacttgataatattgaac
aatcttattttgtgtgcttttattttacaaattgtttagttttgttcaag
taaaaacaaacctataacaatataattaaagtcatcttccgcttaggcca
tatatacttcatctaaagtattatgtatgcaaacgtgtgtttaaaagact
aaatgtttgagtttaaaaaccttctgatgatgagtttgacaatctcactg
tgttaggagctccagcaatcaatcttgtagagtaggcaaaatgagtagaa
actggcacaggaatgggagctagccttagaatgttattacacatagtaac
aatgccaaacactggtaaacagtgtcacctatcatagtctatgatgataa
tgtggaatctttaattttagacaaggaatgagaatcctaataaatggctg
attcctccatgatctgttatcccctta
gaattcctgtctcaaagaaacaaaatggagaaagagaaatcaagaaacct
gttattttcctgtgtcctatgcgtgtacacatctgcacatataatgcaca
tataccacacttacattccacaaatattgtggaataataataaggaaaat
aatccataatgggactaaatatttaaagatacatagtgctataaacagac
acacacagtggaggggtatgtaagaacatcaagacaaaaagcatgaattt
taatgtcaatgtgaaatatatgaaaggaggggggaaagaaaaatggggga
attatgtgactatatcacctttcaggaaaaataatcattttaaaaaatta
gatatatgtgtatgttttacaatattgtagagaacataagagtgtttaga
tagaatactcattattactgataattactgatttgtgttaatgaaggtgc
aaaacagacttacatttaaatctcaataattccaaaactagtagatattg
ggcatacttaaagacctcaagaatgcaattctagtacttcagagaagacc
aacttcagcacaaccacagttcccagtaccttctggcacaatggacctca
agttgtgttctactaactctttttaccatattcacctgcttacacactac
tcattactcatgcattatatgccttgataacatgatagttttgtttgttt
gttgttcttgctgtttccctgctatcaaggagaatataatgcagaaggtt
gggatgtctcatccaaggtaaaagtcctaaagaggtagaatggaaagtga
gctacagcaagcctgatgcttaggaaacaaagactgagcacatcatagca
gctcttcatagctagtgttgttgcactgtgaagaagtggcttgatgaata
aggagagtcctgttttagaaacatctaactagtatatactttatatttta
tctagaaaatcacagagcattatacaaaggcatagtgtattgtttgtttt
gtttggtttttttactttaaaattggagtatttaattggtatttgcatct
aaagtaagcttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_20867849_20868777
seq2: B6Ng01-024D03.b_39_965 (reverse)

seq1  TAAGGGGATAACAGATCATGGAGGAATCAGCCATTTATTAGGATTTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAAGGGGATAACAGATCATGGAGGAATCAGCCATTTATTAGGA-TTCTCA  49

seq1  TTACTTTGTCTAAACTTAAAGATTCCACATTATCATCATAGACTATGATA  100
      || | ||||||||| |||||||||||||||||||||||||||||||||||
seq2  TT-CCTTGTCTAAAATTAAAGATTCCACATTATCATCATAGACTATGATA  98

seq1  GGTGACACTGTTTACCAGTGTTTGGCATTGTTACTATGTGTAATAACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACACTGTTTACCAGTGTTTGGCATTGTTACTATGTGTAATAACATT  148

seq1  CTAAGGCTAGCTCCCATTCCTGTGCCAGTTTCTACTCATTTTGCCTACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGCTAGCTCCCATTCCTGTGCCAGTTTCTACTCATTTTGCCTACTC  198

seq1  TACAAGATTGATTGCTGGAGCTCCTAACACAGTGAGATTGTCAAACTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGATTGATTGCTGGAGCTCCTAACACAGTGAGATTGTCAAACTCAT  248

seq1  CATCAGAAGGTTTTTAAACTCAAACATTTAGTCTTTTAAACACACGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAAGGTTTTTAAACTCAAACATTTAGTCTTTTAAACACACGTTTG  298

seq1  CATACATAATACTTTAGATGAAGTATATATGGCCTAAGCGGAAGATGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATAATACTTTAGATGAAGTATATATGGCCTAAGCGGAAGATGACT  348

seq1  TTAATTATATTGTTATAGGTTTGTTTTTACTTGAACAAAACTAAACAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTATATTGTTATAGGTTTGTTTTTACTTGAACAAAACTAAACAATT  398

seq1  TGTAAAATAAAAGCACACAAAATAAGATTGTTCAATATTATCAAGTCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAATAAAAGCACACAAAATAAGATTGTTCAATATTATCAAGTCCCC  448

seq1  TTCTTTGGGTTTTCTGGGTTGATGCTGGAAAATTTGTTTATTTTACCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGGGTTTTCTGGGTTGATGCTGGAAAATTTGTTTATTTTACCTAG  498

seq1  ACTGCTTTGTCTTTGCCTTGTGAGTGATGTGTATGATTAAGTATTACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTTGTCTTTGCCTTGTGAGTGATGTGTATGATTAAGTATTACAAT  548

seq1  GAATATTGTATGAGAACTCCAAATTTCCGCGCGTTAGCCAATCTGATAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTGTATGAGAACTCCAAATTTCCGCGCGTTAGCCAATCTGATAAC  598

seq1  TCAGACAGCTATCCAGAGACAAAATAGAGACTGGTTTCAATCAATGAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACAGCTATCCAGAGACAAAATAGAGACTGGTTTCAATCAATGAGAT  648

seq1  GACTTAGATTTAGAACAGACAACAAAGCAGAGGTGGTTGGGGTGGTTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAGATTTAGAACAGACAACAAAGCAGAGGTGGTTGGGGTGGTTAGG  698

seq1  GCAAGTGTGATTCCTAATTGGCGCTAACAGATGATAGGCTCCTGTGTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTGTGATTCCTAATTGGCGCTAACAGATGATAGGCTCCTGTGTTCT  748

seq1  CCCAGTGTATGAAAGAAGTGGCTTTACTACCCCTGCTAATCACTGTTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGTATGAAAGAAGTGGCTTTACTACCCCTGCTAATCACTGTTCAA  798

seq1  AGCAGCATTGCTAGAATAGCTCAGTTTGGAACAAAGGTAAAACTCTTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCATTGCTAGAATAGCTCAGTTTGGAACAAAGGTAAAACTCTTTGG  848

seq1  AAATTTATATTTAATAAAGAATTATATTTGAATAGTTCAGTAGCCAATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATATTTAATAAAGAATTATATTTGAATAGTTCAGTAGCCAATCT  898

seq1  GTCTATAAACCAAGAAAGGAATGGAATTC  929
      |||||||||||||||||||||||||||||
seq2  GTCTATAAACCAAGAAAGGAATGGAATTC  927

seq1: chr15_20732610_20733685
seq2: B6Ng01-024D03.g_69_1132

seq1  GAATTCCTGTCTCAAAGAAACAAAATGGAGAAAGAGAAATCAAGAAACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCTCAAAGAAACAAAATGGAGAAAGAGAAATCAAGAAACCT  50

seq1  GTTATTTTCCTGTGTCCTATGCGTGTACACATCTGCACATATAATGCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTCCTGTGTCCTATGCGTGTACACATCTGCACATATAATGCACA  100

seq1  TATACCACACTTACATTCCACAAATATTGTGGAATAATAATAAGGAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCACACTTACATTCCACAAATATTGTGGAATAATAATAAGGAAAAT  150

seq1  AATCCATAATGGGACTAAATATTTAAAGATACATAGTGCTATAAACAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATAATGGGACTAAATATTTAAAGATACATAGTGCTATAAACAGAC  200

seq1  ACACACAGTGGAGGGGTATGTAAGAACATCAAGACAAAAAGCATGAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAGTGGAGGGGTATGTAAGAACATCAAGACAAAAAGCATGAATTT  250

seq1  TAATGTCAATGTGAAATATATGAAAGGAGGGGGGAAAGAAAAATGGGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCAATGTGAAATATATGAAAGGAGGGGGGAAAGAAAAATGGGGGA  300

seq1  ATTATGTGACTATATCACCTTTCAGGAAAAATAATCATTTTAAAAAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTGACTATATCACCTTTCAGGAAAAATAATCATTTTAAAAAATTA  350

seq1  GATATATGTGTATGTTTTACAATATTGTAGAGAACATAAGAGTGTTTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATGTGTATGTTTTACAATATTGTAGAGAACATAAGAGTGTTTAGA  400

seq1  TAGAATACTCATTATTACTGATAATTACTGATTTGTGTTAATGAAGGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATACTCATTATTACTGATAATTACTGATTTGTGTTAATGAAGGTGC  450

seq1  AAAACAGACTTACATTTAAATCTCAATAATTCCAAAACTAGTAGATATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGACTTACATTTAAATCTCAATAATTCCAAAACTAGTAGATATTG  500

seq1  GGCATACTTAAAGACCTCAAGAATGCAATTCTAGTACTTCAGAGAAGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACTTAAAGACCTCAAGAATGCAATTCTAGTACTTCAGAGAAGACC  550

seq1  AACTTCAGCACAACCACAGTTCCCAGTACCTTCTGGCACAATGGACCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAGCACAACCACAGTTCCCAGTACCTTCTGGCACAATGGACCTCA  600

seq1  AGTTGTGTTCTACTAACTCTTTTTACCATATTCACCTGCTTACACACTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGTTCTACTAACTCTTTTTACCATATTCACCTGCTTACACACTAC  650

seq1  TCATTACTCATGCATTATATGCCTTGATAACATGATAGTTTTGTTTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACTCATGCATTATATGCCTTGATAACATGATAGTTTTGTTTGTTT  700

seq1  GTTGTTCTTGCTGTTTCCCTGCTATCAAGGAGAATATAATGCAGAAGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCTTGCTGTTTCCCTGCTATCAAGGAGAATATAATGCAGAAGGTT  750

seq1  GGGATGTCTCATCCAAGGTAAAAGTCCTAAAGAGGTAGAATGGAAAGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTCTCATCCAAGGTAAAAGTCCTAAAGAGGTAGAATGGAAAGTGA  800

seq1  GCTACAGCAAGCCTGATGCTTAGGAAACAAAGACTGAGCACATCATAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGCAAGCCTGATGCTTAGGAAACAAAGACTGAGCACATCATAGCA  850

seq1  GCTCTTCATAGCTAGTGTTGTTGCACTGTGAAGAAGTGGCTTGATGAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCATAGCTAGTGTTGTTGCACTGTGAAGAAGTGGCTTGATGAATA  900

seq1  AGGGAGAGTCCTGTATTTAGAAACATCTAACTAGTATATACTTTATATTT  950
      | |||||||||||| |||||||||||||||||||||||||||||||||||
seq2  A-GGAGAGTCCTGT-TTTAGAAACATCTAACTAGTATATACTTTATATTT  948

seq1  TATCTTAGAAAATCACAGAGCATTATACAAAGGCATAAGTTGTATTGTTT  1000
      |||| ||||||||||||||||||||||||||||||||   ||||||| ||
seq2  TATC-TAGAAAATCACAGAGCATTATACAAAGGCATA--GTGTATTG-TT  994

seq1  TGTTTTGTTTTGTTTTTTTAACTTTAAAATTTGGAGTAATTTAATTTGCT  1050
      |||||||||| |||||||| ||||||||| ||||||| |||||| ||| |
seq2  TGTTTTGTTTGGTTTTTTT-ACTTTAAAA-TTGGAGT-ATTTAA-TTGGT  1040

seq1  ATTTGCATCCTAAAGTTAAGCTTTCC  1076
      |||||||| |||||| |||||||| |
seq2  ATTTGCAT-CTAAAG-TAAGCTTTTC  1064