BAC Information

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BAC

Clone NameB6Ng01-025I07
Chromosome15 (Build37)
Map Location 37,653,067 - 37,654,216
singlet/doubletsinglet
Overlap geneNcald
Upstream geneYwhaz, Zfp706, LOC670911, LOC667492, LOC100041288, Grhl2, LOC667498, 4930447A16Rik, LOC100041313
Downstream geneLOC667534, Rrm2b, LOC100041478, Edd1, Odf1, LOC382986, LOC667563, Klf10, Azin1, Siah1-ps2, Atp6v1c1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025I07.g
ACCDH856843
length1,132
definitionDH856843|Mus musculus domesticus DNA, BAC clone: B6Ng01-025I07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggcttcaaaattaaggcactgaaatgtggtggccagtgggtag
tatcagagctggggcctttaaagggtgtgacggtgctttccctcgaagtg
tgactgagaccttgaagcagacttcacagtccacacagttgcccttctgc
ctctgtgagctcacagttttcttcctctcagggatacactgacaagatcc
caccatggaacgcaaaggcagccaggacacaaccaaacctgctggcattc
aggtttggatctcccagcctcccaaactatgagacaacaaccttctcttc
ttcatcaatcctctagtctgagatattctgccatagtagcagcatggatt
gtgacagcggctttcacacacttctttgcacacagtggagacacccagag
ccagccccatccacgatgtgcacctgcatctgcccctccatgtcattctt
atggtttcttgtactcacagttacccacatttctacaatatcaagcttgt
tctggggctcaagcatgcctttgaatgactgtttaaaacacagaccaaaa
gccaggcggctgtggtacacacctttgatctcagcatttgggaggcagag
gcaggtggatctctgtgagtttgaggctagcctggtctacaaagggagtt
ctaggacagtcagggcaacacagagaaacccagtctcaaaaggaaaacaa
aaacaaaagcaaaaaaaaaaaatgcctagaagacaggagagcctacttcc
tccaccctcttcaaccacttgcattcttggtgggccttcctgccaggggc
acaggaacagacccaccaacagactcttccaggaatctcagtctccagtg
acagaatatcaggaagcaaaatagttgctgctgctcctcttgaagtgagt
tctggaagactccccctcaggccctcagaggcatcccaccttctgtctga
ggccaccttgcagcccatgcacttcctcaaccccaggagagtcccatgct
ctttttgtccttttggctgagtagcagagtgggttcagagcccgactgat
aatattccaccgagtttctaacttatacagtctccaacagggatgtatac
ggatcaatgtactgtgtttgcttgtaggttcc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_37653067_37654216
seq2: B6Ng01-025I07.g_69_1200

seq1  GAATTCAGGCTTCAAAATTAAGGCACTGAAATGTGGTGGCCAGTGGGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCTTCAAAATTAAGGCACTGAAATGTGGTGGCCAGTGGGTAG  50

seq1  TATCAGAGCTGGGGCCTTTAAAGGGTGTGACGGTGCTTTCCCTCGAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAGCTGGGGCCTTTAAAGGGTGTGACGGTGCTTTCCCTCGAAGTG  100

seq1  TGACTGAGACCTTGAAGCAGACTTCACAGTCCACACAGTTGCCCTTCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAGACCTTGAAGCAGACTTCACAGTCCACACAGTTGCCCTTCTGC  150

seq1  CTCTGTGAGCTCACAGTTTTCTTCCTCTCAGGGATACACTGACAAGATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGAGCTCACAGTTTTCTTCCTCTCAGGGATACACTGACAAGATCC  200

seq1  CACCATGGAACGCAAAGGCAGCCAGGACACAACCAAACCTGCTGGCATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGGAACGCAAAGGCAGCCAGGACACAACCAAACCTGCTGGCATTC  250

seq1  AGGTTTGGATCTCCCAGCCTCCCAAACTATGAGACAACAACCTTCTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGGATCTCCCAGCCTCCCAAACTATGAGACAACAACCTTCTCTTC  300

seq1  TTCATCAATCCTCTAGTCTGAGATATTCTGCCATAGTAGCAGCATGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAATCCTCTAGTCTGAGATATTCTGCCATAGTAGCAGCATGGATT  350

seq1  GTGACAGCGGCTTTCACACACTTCTTTGCACACAGTGGAGACACCCAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGCGGCTTTCACACACTTCTTTGCACACAGTGGAGACACCCAGAG  400

seq1  CCAGCCCCATCCACGATGTGCACCTGCATCTGCCCCTCCATGTCATTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCCATCCACGATGTGCACCTGCATCTGCCCCTCCATGTCATTCTT  450

seq1  ATGGTTTCTTGTACTCACAGTTACCCACATTTCTACAATATCAAGCTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTCTTGTACTCACAGTTACCCACATTTCTACAATATCAAGCTTGT  500

seq1  TCTGGGGCTCAAGCATGCCTTTGAATGACTGTTTAAAACACAGACCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGCTCAAGCATGCCTTTGAATGACTGTTTAAAACACAGACCAAAA  550

seq1  GCCAGGCGGCTGTGGTACACACCTTTGATCTCAGCATTTGGGAGGCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCGGCTGTGGTACACACCTTTGATCTCAGCATTTGGGAGGCAGAG  600

seq1  GCAGGTGGATCTCTGTGAGTTTGAGGCTAGCCTGGTCTACAAAGGGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGGATCTCTGTGAGTTTGAGGCTAGCCTGGTCTACAAAGGGAGTT  650

seq1  CTAGGACAGTCAGGGCAACACAGAGAAACCCAGTCTCAAAAGGAAAACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGACAGTCAGGGCAACACAGAGAAACCCAGTCTCAAAAGGAAAACAA  700

seq1  AAACAAAAGCAAAAAAAAAAAATGCCTAGAAGACAGGAGAGCCTACTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAGCAAAAAAAAAAAATGCCTAGAAGACAGGAGAGCCTACTTCC  750

seq1  TCCACCCTCTTCAACCACTTGCATTCTTGGTGGGCCTTCCTGCCA-GGGC  799
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCCACCCTCTTCAACCACTTGCATTCTTGGTGGGCCTTCCTGCCAGGGGC  800

seq1  ACAGGAACAGACCCAACCAACAGACTCTTCCAGGAATCTCAGTCTCCAGT  849
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACAGGAACAGACCC-ACCAACAGACTCTTCCAGGAATCTCAGTCTCCAGT  849

seq1  GACAGAATATCAGGAAGCAAAATAGTTGCTGCTGCTTCCTCTTGAAGTGA  899
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GACAGAATATCAGGAAGCAAAATAGTTGCTGCTGC-TCCTCTTGAAGTGA  898

seq1  GTCCTGGAAGACT-CCCCTCAGGCCCTCAGAAGCATCCCACC-TCTGTCT  947
      || |||||||||| ||||||||||||||||| |||||||||| |||||||
seq2  GTTCTGGAAGACTCCCCCTCAGGCCCTCAGAGGCATCCCACCTTCTGTCT  948

seq1  GAGGCCACCCTTGCAGCCCATGCACTTCCCTCAACCCCAGGAAGAGTCCC  997
      ||||||| ||||||||||||||||||| ||||||||||||| ||||||||
seq2  GAGGCCA-CCTTGCAGCCCATGCACTT-CCTCAACCCCAGG-AGAGTCCC  995

seq1  ATGGCTCTTTTTGTTCCTTTTTGGCTGAAGTAGCCAGAGTTGGTTTCAGA  1047
      || |||||||||||  | ||||||||| ||||| ||||| ||| ||||||
seq2  AT-GCTCTTTTTGT--CCTTTTGGCTG-AGTAG-CAGAG-TGGGTTCAGA  1039

seq1  GCCCCGACTGATAAATATTCCAACGCGAGTTTCTAAACATAAACAGTCTC  1097
      | |||||||||| |||||||||   ||||||||| ||| || ||||||||
seq2  G-CCCGACTGAT-AATATTCCA--CCGAGTTTCT-AACTTATACAGTCTC  1084

seq1  AAACAAGGCAATGATTACAGGAACAAATGTAACTGTGTTTGCCTTTAGGT  1147
       |||| ||  |||  ||| ||| | ||||| ||||||||||| | |||||
seq2  CAACAGGG--ATGTATAC-GGATC-AATGT-ACTGTGTTTGCTTGTAGGT  1129

seq1  TCC  1150
      |||
seq2  TCC  1132