BAC Information

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BAC

Clone NameB6Ng01-026L05
Chromosome15 (Build37)
Map Location 74,995,625 - 74,996,546
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040984, Bai1, 1700016M24Rik, Arc, Jrk, 4933427E11Rik, Psca, 4930572J05Rik, Slurp1, Lypd2, 2300005B03Rik, Lynx1, Ly6d, D730001G18Rik, Ly6k, Gml, Hemt1, Cyp11b1, Cyp11b2, 2010109I03Rik, LOC625653, Ly6e, Ly6i, LOC666240, LOC100041528, Ly6a, Ly6c, LOC546642, EG625737, LOC100041546, I830127L07Rik, LOC100041070, LOC546644
Downstream geneLOC100041087, BC025446, LOC100041092, Ly6f, LOC100041652, LOC100041107, 9030619P08Rik, Ly6h, Gpihbp1, Zfp41, 2810039B14Rik, Top1mt, Rhpn1, Mafa, Zc3h3, LOC672572, Gsdmdc1, Naprt1, Eef1d, Tigd5, Pycrl, Tsta3, Zfp623, Eif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026L05.bB6Ng01-026L05.g
ACCDH857665DH857666
length9121,138
definitionDH857665|Mus musculus domesticus DNA, BAC clone: B6Ng01-026L05, 5' end.DH857666|Mus musculus domesticus DNA, BAC clone: B6Ng01-026L05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaactgaagaaactcaaatggctgagaagcacctaaagaaatg
ttcagcatccttagtcatcaaggaaattgaaatcaaaacaaccctgagat
tccacctcacactggtcagaatggctaagataaaaaactcaggtgacata
agatgctgttgtggatgtggcaaaaaaggaacactcctccattgctggtg
ggactgtaagcctgtacaaccactctagaaatcagtctaggggttcttca
gaaaattggacatagtattacctgagggcccagatataccactcctgggc
acatactcagaagatgctacaaaatgtaataaagacacacactccactat
gttcagaagctggaaacaacacaaataaccctcaacagaggatggacaca
aaaaacatgtcagcccattttagttctgaaaacacttgttctgtatctct
atccatctgtttgatgaggcaagacagtgagttctgaggtccctccatct
tgactttcggttggatttatacttggtgtgaatgtttgagtggccatctc
tggtgagcttccagtaatatctgttacagtggtcttaaagactatggaat
ctttggacctgttcacacaaaaattctgctctcaccttaaaggggataaa
agagagtttattctgaagccaaatatgagtaagagtgggctgagggaaag
ccttaaatctaatactttatttctctgccagtgaaattagtcaattcaag
ccagatgttgaaagaaaattatatgtacaggttttttgaaaaagtacttt
caggcaggttcactggctccaagaccaagccagagaagttgctgagggag
ggagaaagagagaagcaagaaattcaaataggagggtgtgagaataaagt
gagagaaagtag
gaattctcacctgaggaataccgaatggcagagaagcacctgagaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcataccagtcagaatggctaagataaaaaattcaggtgagagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggatgatccagcaatacctctcctgggc
atatatccagaagatgccgcaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtatatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggtatcatcctgagtgaggtaacacattcacaaa
ggaactcacactatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatcgaaggagttacagagacaaagtttggacctgagacga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgctggggcctagaaaac
acagaagtggatgctcacagtcagctaatggatggatcagagggctccaa
tgagagctagagaagtacccagagctaaaggatctgcaccctatagtgac
acattatgactaccagtacccagagctcttgactctagctgctattgtat
caaagatggctatcgcatcactgaaagaggccatgaatgcaacttattgc
ccgtacaggacccaggccaagggaagtgtgtggtgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_74995625_74996546
seq2: B6Ng01-026L05.b_48_959

seq1  GAATTCACAACTGAAGAAACTCAAATGGCTGAGAAGCACCTAAAGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAACTGAAGAAACTCAAATGGCTGAGAAGCACCTAAAGAAATG  50

seq1  TTCAGCATCCTTAGTCATCAAGGAAATTGAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATCCTTAGTCATCAAGGAAATTGAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACACTGGTCAGAATGGCTAAGATAAAAAACTCAGGTGACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACTGGTCAGAATGGCTAAGATAAAAAACTCAGGTGACATA  150

seq1  AGATGCTGTTGTGGATGTGGCAAAAAAGGAACACTCCTCCATTGCTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGTTGTGGATGTGGCAAAAAAGGAACACTCCTCCATTGCTGGTG  200

seq1  GGACTGTAAGCCTGTACAACCACTCTAGAAATCAGTCTAGGGGTTCTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTAAGCCTGTACAACCACTCTAGAAATCAGTCTAGGGGTTCTTCA  250

seq1  GAAAATTGGACATAGTATTACCTGAGGGCCCAGATATACCACTCCTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGGACATAGTATTACCTGAGGGCCCAGATATACCACTCCTGGGC  300

seq1  ACATACTCAGAAGATGCTACAAAATGTAATAAAGACACACACTCCACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTCAGAAGATGCTACAAAATGTAATAAAGACACACACTCCACTAT  350

seq1  GTTCAGAAGCTGGAAACAACACAAATAACCCTCAACAGAGGATGGACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAAGCTGGAAACAACACAAATAACCCTCAACAGAGGATGGACACA  400

seq1  AAAAACATGTCAGCCCATTTTAGTTCTGAAAACACTTGTTCTGTATCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATGTCAGCCCATTTTAGTTCTGAAAACACTTGTTCTGTATCTCT  450

seq1  ATCCATCTGTTTGATGAGGCAAGACAGTGAGTTCTGAGGTCCCTCCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCTGTTTGATGAGGCAAGACAGTGAGTTCTGAGGTCCCTCCATCT  500

seq1  TGACTTTCGGTTGGATTTATACTTGGTGTGAATGTTTGAGTGGCCATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTCGGTTGGATTTATACTTGGTGTGAATGTTTGAGTGGCCATCTC  550

seq1  TGGTGAGCTTCCAGTAATATCTGTTACAGTGGTCTTAAAGACTATGGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGCTTCCAGTAATATCTGTTACAGTGGTCTTAAAGACTATGGAAT  600

seq1  CTTTGGACCTGTTCACACAAAAATTCTGCTCTCACCTTAAAGGGGATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGACCTGTTCACACAAAAATTCTGCTCTCACCTTAAAGGGGATAAA  650

seq1  AGAGAGTTTATTCTGAAGCCAAATATGAGTAAGAGTGGGCTGAGGGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTTTATTCTGAAGCCAAATATGAGTAAGAGTGGGCTGAGGGAAAG  700

seq1  CCTTAAATCTAATACTTTATTTCTCTGCCAGTGAAATTAGTCAATTCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAATCTAATACTTTATTTCTCTGCCAGTGAAATTAGTCAATTCAAG  750

seq1  CCAGATGTTGAAAGAAAATTATATGTACAGGTTTTTTGAAAAAGTACTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGTTGAAAGAAAATTATATGTACAGGTTTTTTGAAAAAGTACTTT  800

seq1  CAGGCAGGTTCACTGGCTCCAAGGACCAAGGCCAGAGAAGTTGCTGAGGG  850
      |||||||||||||||||||||| |||||| ||||||||||||||||| ||
seq2  CAGGCAGGTTCACTGGCTCCAA-GACCAA-GCCAGAGAAGTTGCTGA-GG  847

seq1  GAGGGAGAAAGAGAGAAAGCAAGGAAATTCAAAATAGGAGGAGTGTGAGA  900
      ||||||||||||||| |||||| ||||||| |||||||||| ||||||||
seq2  GAGGGAGAAAGAGAG-AAGCAA-GAAATTC-AAATAGGAGG-GTGTGAGA  893

seq1  ATAAGAGTGAGAAGAAAAGTAG  922
      |||| |||||||   |||||||
seq2  ATAA-AGTGAGA--GAAAGTAG  912