BAC Information

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BAC

Clone NameB6Ng01-026L24
Chromosome15 (Build37)
Map Location 16,522,161 - 16,523,085
singlet/doubletsinglet
Overlap genenone
Upstream geneEG239341, LOC100040087, LOC624183
Downstream geneLOC100040119, Cdh9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026L24.bB6Ng01-026L24.g
ACCDH857694DH857695
length924481
definitionDH857694|Mus musculus domesticus DNA, BAC clone: B6Ng01-026L24, 5' end.DH857695|Mus musculus domesticus DNA, BAC clone: B6Ng01-026L24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccaactttataattatacaactaaaataataaaaatataaata
tatcccacacactatgggttactgttgtagtcttggcatatggagttgga
gacagggggattgtgaataggaggacagcctagcatacatggtaagtctc
aatacggctaagtccttgtagcaagaaccttattccaactacaagcaaag
aaaaagaaaagtaccaatttcagtaatggctcttgtttatttcctcctgt
tttctattttgaatatcacaacaattcctaatagatttaatttacagata
ccttatggtcaactccattagctgtaatttttcttgaattattgtcaatt
ctttatattttctcttaagattaaattcaccactagcttcagttttacca
agccttacatcattgaactttctgtgtactagaaaaagtgtacattctac
agatacatatgccttctaggagaattcttgtttcatcacattataactgt
taagtatgggtcacccaagccagaaggacaaatatattgtgcggtggaat
gcaagggaaaattacattttgagtcaaagtacatttgccgtggagttatt
catgaaaagaaatgtttattatcttttaaaaaaagaatatattaaaagtt
gctgagtttccacaacctgtttctgacagctctctcggtgtaagtaatac
atcatgagtgtgatggcaatctgatgatgtattgggaccatacatcactg
tggtgacggtgccttaatgacagatgagtaatatgtcttcaggtaaagct
cgaaaatttaggcttgcctggaaaatagagtttctggaagaagaaaatac
cacacaactttatgaaataaagcatgtaacaatatcgttcactaaatgag
aagggtgtgagattgggggaggaa

cctcactttgtaatttgtggcacactttagtgatgagcataatgatggtt
tcaggaagagaactaaagtaattcttaaggacacttctgtcaggatggat
taaaaccactagagttactgcgttccatgcattccatttctctctctctc
tctctctctctctctctctctctctctctctctgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctctcctctgccc
ccccccacgctctctcactcccttcctaacccccactcacaaaatacata
tagagatttttcatttttatttttcacccacactcacacagacacgcgca
cacagagcgggggcgcgccctctctctctctttgtatacacacacacaca
caaagagagatgagacactctctgtctctatatatatatatatatatctc
atctatatgtgttagacgctcgtagaaagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_16522161_16523085
seq2: B6Ng01-026L24.b_43_966

seq1  GAATTCTCCAACTTTATAATTATACAACTAAAATAATAAAAATATAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAACTTTATAATTATACAACTAAAATAATAAAAATATAAATA  50

seq1  TATCCCACACACTATGGGTTACTGTTGTAGTCTTGGCATATGGAGTTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCACACACTATGGGTTACTGTTGTAGTCTTGGCATATGGAGTTGGA  100

seq1  GACAGGGGGATTGTGAATAGGAGGACAGCCTAGCATACATGGTAAGTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGGGATTGTGAATAGGAGGACAGCCTAGCATACATGGTAAGTCTC  150

seq1  AATACGGCTAAGTCCTTGTAGCAAGAACCTTATTCCAACTACAAGCAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACGGCTAAGTCCTTGTAGCAAGAACCTTATTCCAACTACAAGCAAAG  200

seq1  AAAAAGAAAAGTACCAATTTCAGTAATGGCTCTTGTTTATTTCCTCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAAGTACCAATTTCAGTAATGGCTCTTGTTTATTTCCTCCTGT  250

seq1  TTTCTATTTTGAATATCACAACAATTCCTAATAGATTTAATTTACAGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTTTGAATATCACAACAATTCCTAATAGATTTAATTTACAGATA  300

seq1  CCTTATGGTCAACTCCATTAGCTGTAATTTTTCTTGAATTATTGTCAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGGTCAACTCCATTAGCTGTAATTTTTCTTGAATTATTGTCAATT  350

seq1  CTTTATATTTTCTCTTAAGATTAAATTCACCACTAGCTTCAGTTTTACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATTTTCTCTTAAGATTAAATTCACCACTAGCTTCAGTTTTACCA  400

seq1  AGCCTTACATCATTGAACTTTCTGTGTACTAGAAAAAGTGTACATTCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTACATCATTGAACTTTCTGTGTACTAGAAAAAGTGTACATTCTAC  450

seq1  AGATACATATGCCTTCTAGGAGAATTCTTGTTTCATCACATTATAACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACATATGCCTTCTAGGAGAATTCTTGTTTCATCACATTATAACTGT  500

seq1  TAAGTATGGGTCACCCAAGCCAGAAGGACAAATATATTGTGCGGTGGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATGGGTCACCCAAGCCAGAAGGACAAATATATTGTGCGGTGGAAT  550

seq1  GCAAGGGAAAATTACATTTTGAGTCAAAGTACATTTGCCGTGGAGTTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGAAAATTACATTTTGAGTCAAAGTACATTTGCCGTGGAGTTATT  600

seq1  CATGAAAAGAAATGTTTATTATCTTTTAAAAAAAGAATATATTAAAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAAGAAATGTTTATTATCTTTTAAAAAAAGAATATATTAAAAGTT  650

seq1  GCTGAGTTTCCACAACCTGTTTCTGACAGCTCTCTCGGTGTAAGTAATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTTTCCACAACCTGTTTCTGACAGCTCTCTCGGTGTAAGTAATAC  700

seq1  ATCATGAGTGTGATGGCAATCTGATGATGTATTGGGACCATACATCACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAGTGTGATGGCAATCTGATGATGTATTGGGACCATACATCACTG  750

seq1  TGGTGACGGTGCCTTAATGACAGATGAGTAATATGTCTTCAGGTAAGGCT  800
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGGTGACGGTGCCTTAATGACAGATGAGTAATATGTCTTCAGGTAAAGCT  800

seq1  CGAAAATTTAGGCTTGCCTGGAAAATAGAGTTTCTGGAAGAAGAAAATAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAATTTAGGCTTGCCTGGAAAATAGAGTTTCTGGAAGAAGAAAATAC  850

seq1  CACACAACTTTATGAAATAAAGCATGTAACAAATATCGTTCACTAAATGA  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CACACAACTTTATGAAATAAAGCATGTAAC-AATATCGTTCACTAAATGA  899

seq1  GAAGGGTGTGAGATTGGGGGAGGGA  925
      ||||||||||||||||||||||| |
seq2  GAAGGGTGTGAGATTGGGGGAGGAA  924


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