BAC Information

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BAC

Clone NameB6Ng01-026N15
Chromosome15 (Build37)
Map Location 49,295,609 - 49,296,518
singlet/doubletsinglet
Overlap genenone
Upstream geneCsmd3, EG665146, LOC100039600
Downstream geneLOC100039539, LOC665160
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026N15.bB6Ng01-026N15.g
ACCDH857764DH857765
length1,247908
definitionDH857764|Mus musculus domesticus DNA, BAC clone: B6Ng01-026N15, 5' end.DH857765|Mus musculus domesticus DNA, BAC clone: B6Ng01-026N15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgtttacatcggagccacagttatcaaaaaagcaaggaggggc
acttcatactcatcaaaggcaaaatcttccaagaggaactctcaattctg
aacatctatgctccaaaagcaaggtcatccacattcattaaacttttagt
aaagctcaaagcatacattgcaccacacacaaaaatagtctgagacttta
ataccccaatttcatcaatggacagatcctggaaacagaaactaaacaga
aacacagtgaaactagcagaagttatgaaacaaacgggtttaacatatat
ctacagaacattttatcctaaaacaaaaggatatactttcttctcagcac
ctcatagtaccttctccaaaaatacctatataattggtcacaaaacagcc
tcaacagatataaaaaatattgaaattatctgatgcaacctatcagatca
ccacaagctaagacagagtttcaataacaacataaataaatattgaggtg
gaaactgaacaacactcttctcaaggaaaaataaggaaagaaattaaaga
ctttttagagtttaaggaaagtgaagccacaacatacccaaacttatggg
acacaatgaaagcaatcttaagaggaaaacctatacctctgagggcctcc
aaaaagaaattagagaaagcacacactagcagcttgacagcacacctaaa
aggtctagaacaaaagaaagcaaattcactcaagaggagtagacagcagg
aaataatcaaactcagggctgaaatcaaccaattagaaacaaaaagtagt
atacaaagaattaaccaaaccaggagctatttttatgagaaaatcttagc
cagactaaatagagggcacaggaacagtatgctaattaacaaaatcagaa
atgaaaagggagacataacaacagagcctgagaaatctaaagcatcatca
aatcctactgtcaaagatatactcaacaaactggaaacctgatgaatgga
cattttctagacagatacaggtacaaagttaatcagtcagattatgacat
aaacaggccatatcactaaagaaaaagaaatagtcataatagtcttcacc
aaaagtcaggaacgatggtttagtgccagtttatcagactcagaagacta
ttcattctccaacattcaattaaacgagatctccatcttgagctaatctg
atctaccatagaccaaggaaagaattcgaacatcccttgatgaaatg
gaattcctgttggctgtggcagatgacagtttagcaaggaatggggaaac
tgaattttatgaaaaacaagatacttgagtcattgtgtttctgaaaaata
ccgtggattacatttgtgtctcctcatggccttcttctctgacctttggt
agccattctaggatactctcagatatttgttattttgggttctactttat
gactggagagcaatgcaatttcattgcattccttatattactgtatgatt
cttctagtattttaagacgttgccagaattctgtaatttcttagttttta
aaatatcccataaaaaaacaaatacagatattatatgagattttggttag
attattggatgttataagcctttttttaatcttcaattatttgtttaact
attaagtaatatgtattatttaaaataaaaatagatttcttcttttattt
agcttaatttttctgtttattcttctcccctttatacattaaaattggtt
accttccttcacttctccagtaccatcccccctgatttgtacaatctttg
atatattgttccactacacaatggtttttttttttacatttttctaatat
ttcaactgtgttattctcttctgcttcaaaagttttaagatcagtatcca
aagtctagaatattcctaaactaccactgcttcttttctataacacttaa
gattttcattaaacatttgagtaattagtttaattttacatcgatataac
caaaacctaaactctatatgtgcagcaatgtgtcttatgtagattgaatg
atatttaataagtaaattaatggtgaaataatttaaaatcccctttcaca
ctgttccataagctttgcaattggaaggaatcagcctctatattaacctc
tgaatccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_49295609_49296518
seq2: B6Ng01-026N15.g_69_976

seq1  GAATTCCTGTTGGCTGTGGCAGATGACAGTTTAGCAAGGAATGGGGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTGGCTGTGGCAGATGACAGTTTAGCAAGGAATGGGGAAAC  50

seq1  TGAATTTTATGAAAAACAAGATACTTGAGTCATTGTGTTTCTGAAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTTATGAAAAACAAGATACTTGAGTCATTGTGTTTCTGAAAAATA  100

seq1  CCGTGGATTACATTTGTGTCTCCTCATGGCCTTCTTCTCTGACCTTTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGATTACATTTGTGTCTCCTCATGGCCTTCTTCTCTGACCTTTGGT  150

seq1  AGCCATTCTAGGATACTCTCAGATATTTGTTATTTTGGGTTCTACTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTCTAGGATACTCTCAGATATTTGTTATTTTGGGTTCTACTTTAT  200

seq1  GACTGGAGAGCAATGCAATTTCATTGCATTCCTTATATTACTGTATGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGAGAGCAATGCAATTTCATTGCATTCCTTATATTACTGTATGATT  250

seq1  CTTCTAGTATTTTAAGACGTTGCCAGAATTCTGTAATTTCTTAGTTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGTATTTTAAGACGTTGCCAGAATTCTGTAATTTCTTAGTTTTTA  300

seq1  AAATATCCCATAAAAAAACAAATACAGATATTATATGAGATTTTGGTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCCCATAAAAAAACAAATACAGATATTATATGAGATTTTGGTTAG  350

seq1  ATTATTGGATGTTATAAGCCTTTTTTTAATCTTCAATTATTTGTTTAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGGATGTTATAAGCCTTTTTTTAATCTTCAATTATTTGTTTAACT  400

seq1  ATTAAGTAATATGTATTATTTAAAATAAAAATAGATTTCTTCTTTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTAATATGTATTATTTAAAATAAAAATAGATTTCTTCTTTTATTT  450

seq1  AGCTTAATTTTTCTGTTTATTCTTCTCCCCTTTATACATTAAAATTGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAATTTTTCTGTTTATTCTTCTCCCCTTTATACATTAAAATTGGTT  500

seq1  ACCTTCCTTCACTTCTCCAGTACCATCCCCCCTGATTTGTACAATCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCCTTCACTTCTCCAGTACCATCCCCCCTGATTTGTACAATCTTTG  550

seq1  ATATATTGTTCCACTACACAATGGTTTTTTTTTTTACATTTTTCTAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTGTTCCACTACACAATGGTTTTTTTTTTTACATTTTTCTAATAT  600

seq1  TTCAACTGTGTTATTCTCTTCTGCTTCAAAAGTTTTAAGATCAGTATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTGTGTTATTCTCTTCTGCTTCAAAAGTTTTAAGATCAGTATCCA  650

seq1  AAGTCTAGAATATTCCTAAACTACCACTGCTTCTTTTCTATAACACTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAGAATATTCCTAAACTACCACTGCTTCTTTTCTATAACACTTAA  700

seq1  GATTTTCATTAAACATTTGAGTAATTAGTTCAA-TTTACATCGATATAAC  749
      |||||||||||||||||||||||||||||| || ||||||||||||||||
seq2  GATTTTCATTAAACATTTGAGTAATTAGTTTAATTTTACATCGATATAAC  750

seq1  CAAAACCTAAACTCTATATGTGCAGCAATGTGTCTTATGTAAGATTGAAT  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAAAACCTAAACTCTATATGTGCAGCAATGTGTCTTATGT-AGATTGAAT  799

seq1  GATATTTATTAAGTAAATTAATGGTGAAATAATTTAAAAATCCCCTTTTC  849
      |||||||| |||||||||||||||||||||||||| ||||||||| ||||
seq2  GATATTTAATAAGTAAATTAATGGTGAAATAATTT-AAAATCCCC-TTTC  847

seq1  ACACTGTTCCATAAGCTTTGCAATTGAAAGGAATCAGCCTCTATATTAAC  899
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACACTGTTCCATAAGCTTTGCAATTGGAAGGAATCAGCCTCTATATTAAC  897

seq1  CTCTGAATCCG  910
      |||||||||||
seq2  CTCTGAATCCG  908