BAC Information

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BAC

Clone NameB6Ng01-027I04
Chromosome15 (Build37)
Map Location 92,917,261 - 92,918,130
singlet/doubletsinglet
Overlap genenone
Upstream geneCntn1, Pdzrn4, LOC100042552
Downstream geneLOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027I04.bB6Ng01-027I04.g
ACCDH858234DH858235
length987228
definitionDH858234|Mus musculus domesticus DNA, BAC clone: B6Ng01-027I04, 5' end.DH858235|Mus musculus domesticus DNA, BAC clone: B6Ng01-027I04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgacctggttgctgcggactgcatacccaagctcctctctac
aaagtgagttttaacatgaagacatggtgtgtagcaagaaatacccagga
agcaataagtcctggtgtgagtacaaaactagaaagaaacccctcaatct
aggcaagccaccccacaacatgcagtttgtcgagagaactccagatttct
cagacctctttcaggaatcatctcagcaggaccgccctttggcattccac
cactccatccttaactacaaacatacgcacacacatatacacacacacat
acacacaaacatggacacatacatggacacatacatacaaacacacacat
atacacacacacatacacacaaacacgcacacataaatacacacatgtac
actaagaacaaaatgcttttcaaggaacattctatattatctacagacaa
actctattggctacacagaattcctgatgaattgtgtatggttcacatca
aaaccaccacatggtgtctataattataaaagatattcatttaaaatata
caacaataagaaacagcctttgtttacaatcttatgtagtgaatgggacg
ttttttgtgcagcttctaggatagggtctgggagctgacactgtttacat
agcccccacttaaaaaaaaagaatttataaggtgaaagtggcattactta
gaatggagagagaggaaaaacaacatttgaggtacaaattatcatctatc
tgaaaaacagaaaaaaaataataacaatacactttaattaattgaccacc
tggtccttcacttgttggatgcacagtcttttatcatctctacacataac
atgatgttagaatgtgttctacaaacagaagaaaactcattcatcgctct
gctgcaatagagtaaaacttgttctattactgagagctgagacttgatgg
gcccagaaagcaaaggcattgctgctgagctagcaac
cttgagtctcgaatgagactttagactttgaatttttcaactgtacagag
actatgagagactatggggacttttgaagttgactaaatgcattttttaa
ttatgatgtggctatgagcctatgggggccagcaagtagaatgaccttta
taggctcaaatatttgaatttttggtccccacacactaaggaggtgtgat
cttgttagaggaggtatgtcactggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_92917261_92918130
seq2: B6Ng01-027I04.b_46_916

seq1  GAATTCAATGACCTGGTTGCTGCGGACTGCATACCCAAGCTCCTCTCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGACCTGGTTGCTGCGGACTGCATACCCAAGCTCCTCTCTAC  50

seq1  AAAGTGAGTTTTAACATGAAGACATGGTGTGTAGCAAGAAATACCCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAGTTTTAACATGAAGACATGGTGTGTAGCAAGAAATACCCAGGA  100

seq1  AGCAATAAGTCCTGGTGTGAGTACAAAACTAGAAAGAAACCCCTCAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAAGTCCTGGTGTGAGTACAAAACTAGAAAGAAACCCCTCAATCT  150

seq1  AGGCAAGCCACCCCACAACATGCAGTTTGTCGAGAGAACTCCAGATTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGCCACCCCACAACATGCAGTTTGTCGAGAGAACTCCAGATTTCT  200

seq1  CAGACCTCTTTCAGGAATCATCTCAGCAGGACCGCCCTTTGGCATTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTCTTTCAGGAATCATCTCAGCAGGACCGCCCTTTGGCATTCCAC  250

seq1  CACTCCATCCTTAACTACAAACATACGCACACACATATACACACACACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCATCCTTAACTACAAACATACGCACACACATATACACACACACAT  300

seq1  ACACACAAACATGGACACATACATGGACACATACATACAAACACACACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAAACATGGACACATACATGGACACATACATACAAACACACACAT  350

seq1  ATACACACACACATACACACAAACACGCACACATAAATACACACATGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACACATACACACAAACACGCACACATAAATACACACATGTAC  400

seq1  ACTAAGAACAAAATGCTTTTCAAGGAACATTCTATATTATCTACAGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGAACAAAATGCTTTTCAAGGAACATTCTATATTATCTACAGACAA  450

seq1  ACTCTATTGGCTACACAGAATTCCTGATGAATTGTGTATGGTTCACATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATTGGCTACACAGAATTCCTGATGAATTGTGTATGGTTCACATCA  500

seq1  AAACCACCACATGGTGTCTATAATTATAAAAGATATTCATTTAAAATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACCACATGGTGTCTATAATTATAAAAGATATTCATTTAAAATATA  550

seq1  CAACAATAAGAAACAGCCTTTGTTTACAATCTTATGTAGTGAATGGGACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATAAGAAACAGCCTTTGTTTACAATCTTATGTAGTGAATGGGACG  600

seq1  TTTTTTGTGCAGCTTCTAGGATAGGGTCTGGGAGCTGACACTGTTTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTGCAGCTTCTAGGATAGGGTCTGGGAGCTGACACTGTTTACAT  650

seq1  AGCCCCCACTTAAAAAAAAAGAATTTATAAGGTGAAAGTGGCATTACTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCACTTAAAAAAAAAGAATTTATAAGGTGAAAGTGGCATTACTTA  700

seq1  GAATGGAGAGAGAGGAAAAACAACATTTGAGGTACAAATTATCATCTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGAGAGAGAGGAAAAACAACATTTGAGGTACAAATTATCATCTATC  750

seq1  TGAAAAACAGAAAAAAAATAATAACAATACAC-TTAATTAATTGACCACC  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGAAAAACAGAAAAAAAATAATAACAATACACTTTAATTAATTGACCACC  800

seq1  TGGTCCTTCACTTGTTGGATGCACAGTC-TTTATCATCTCTACACATAAC  848
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGGTCCTTCACTTGTTGGATGCACAGTCTTTTATCATCTCTACACATAAC  850

seq1  AATGATGTTAGAATGTGTTCTA  870
       |||||||||||||||||||||
seq2  -ATGATGTTAGAATGTGTTCTA  871