BAC Information

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BAC

Clone NameB6Ng01-029G19
Chromosome15 (Build37)
Map Location 45,103,913 - 45,105,052
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665041, Nudcd1, Eny2, Pkhd1l1, Ebag9, 5730410E15Rik, A930017M01Rik, EG432950, Kcnv1
Downstream geneLOC100039389, EG432951
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029G19.bB6Ng01-029G19.g
ACCDH859630DH859631
length1,2041,128
definitionDH859630|Mus musculus domesticus DNA, BAC clone: B6Ng01-029G19, 5' end.DH859631|Mus musculus domesticus DNA, BAC clone: B6Ng01-029G19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttctaagacttttaacatgaataggtgttgtattttg
tcaaatgctttctcagaatctgatgagatgatcatgtgttttttttttcc
ctttgaattagtttatatagtttatatagtccattagtttatatggatta
tgttgatggatttccgtatgttgaaccatccctgcatccctaggatgaaa
cctacttgatcatgatggatgattgttttgatgtgttcttggatttggtt
tgtgagaattttattgagtatttttgcattggtattcataagggaaatta
gtctgaagttctctattgctggtgggattgcaagcttgtataaccacgtt
ggaaatcagttttgtgctacctcagaaaattagacatagtactaccggag
tatccagcaataacactcctgggcatatacccagaagatgctccaagatg
taataaggacacatgctccactatgttcatagcagccttatttataaaag
ccagagctggaaagaacccagatgtccttcagcagatgagtggatgcaga
taatccaatttacacaatggagtactactcagctattaaaaacaatgaat
ttgtgaatttcttaggcaaatggatggatctggagtatatcattctgagt
gaggtaacccaatcacaaaagaacacacaagatatgcactcactgataag
tagatattagcccagaagcttgggatagtcaagatacaattcgaaaaaca
catgaaactcaaaaagaaggaagaccaaagtaaggatactttgatccttc
ttagagggggatcagaatatccatggagggagttacagagacaaagtgtg
gagcagagactgaatgaatgaccatgcagagactgccccacctggggatc
tatcccataaacaacaaccaaacccagacactattgtggatgctaacaag
agcttgctgacaggagcatgatatatctgtctctagaaagttctgctagt
gcctgacaaatacagaagtggatgaatacaggcatccatggatagaacca
ctgggtcctcaatgaaggaacttataggtgactcaaggtcctgaatggtt
ttgcgtccgtagggaagatttacagataaactaatcatacctctgacccc
tgggcttactctacaagaaaaactggtgaaatcatgttctgtttcatcta
cgca
gaattccataatttgattagttctgcctgtttttgaaaaggaaagaaagc
ttaatgtcacagctacacaaaaagaatttccatatatatttcctatttta
aatgcttataacttaaaatgcataaaatagtatttacactttcaaagaaa
gaaagagaagcaccatttatattaagaaatagaggtctgagattttacca
acagtgttctattattcatgagagtgttctgactttctataaaaccatga
taatttccactaacacatttctctaacggtttctgtcattttggtgcaga
aagagggtggcaaggaaacttgttccctgtgagcactgatccagaacaca
ctgcaagcaactctgtcacagaagccttctttagggagagtaagctcagt
tgctacacagcagactgacaagctagattaatgtcttacagaaaagacta
ggtgtgtgcctctctacaaatggtaggcataaattgaccacataaatcaa
gaatcaggactgctgagaaactcttctatcaaagctaaggctgttcctag
tatgtagttgtattataatagtattaacaaatttatattcagcatgcaac
aataaacatccactatgctatgtaaatatacactatgaaataggtagcat
atatgtaaacagtggcagcatttggcatcatcatattacagatagcgatt
atttttctcagtgatctagtgagtttactgatattactcacaggaacact
catttacatttctaaactgtcttctccacaacaagactaactaatggcca
actgaactgtctaatcgtgcagtagttctgagttctagtaaacatttcta
tacactcaagcttcctttgtgcctatgtgcagcttaggaagggttacatg
caacagtgtaaacgggaagagtgactgggaaactcatcagttgacacatg
tagctaccagatacacacttaagaaagctagttgatagcccttatgagga
cagaaacagaaattgattcctgagaaaatgcatcagacctgaagaaaaca
ccaatctcgaaaccatacaaaagctagactttgtacctgagagaggtctg
tgttgaacaaaaaaacacctgatctagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_45103913_45105052
seq2: B6Ng01-029G19.g_63_1190 (reverse)

seq1  CCTAGATACAGTTGTTCTTTTTGTTCAAACAACATGACCTCCTCTCAGGT  50
      ||||||| ||| |||| |||||||||||   ||| ||||| |||||||||
seq2  CCTAGAT-CAGGTGTT-TTTTTGTTCAA--CACA-GACCT-CTCTCAGGT  44

seq1  ACAGAAGTCTAGCTCTTGTATGTGTCTCTGAGATTGGTGTTTTCTTCAGG  100
      ||| |||||||||| ||||||| || || ||||||||||||||||||| |
seq2  ACA-AAGTCTAGCTTTTGTATG-GTTTC-GAGATTGGTGTTTTCTTCA-G  90

seq1  GTCTGATGCATTTTCTCAGGGAATCAATTTCTTGTTTCTGTCCTCATAAG  150
      |||||||||||||||||| |||||||||||| ||||||||||||||||||
seq2  GTCTGATGCATTTTCTCA-GGAATCAATTTC-TGTTTCTGTCCTCATAAG  138

seq1  GGCTATCAACTAGCTTTCTTAAGTGTGTATCTGGTAGCTACATGTGTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATCAACTAGCTTTCTTAAGTGTGTATCTGGTAGCTACATGTGTCAA  188

seq1  CTGATGAGTTT-CCAGTCACTCTTCCCGTTTACACCTGTTGCATGTAACC  249
      ||||||||||| |||||||||||||||||||||| |||||||||||||||
seq2  CTGATGAGTTTCCCAGTCACTCTTCCCGTTTACA-CTGTTGCATGTAACC  237

seq1  CTTCCTAAGCTGCACATAGGCACAAAGGAAGCTTGAGTGTATAGAAATGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAAGCTGCACATAGGCACAAAGGAAGCTTGAGTGTATAGAAATGT  287

seq1  TTACTAGAACTCAGAACTACTGCACGATTAGACAGTTCAGTTGGCCATTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGAACTCAGAACTACTGCACGATTAGACAGTTCAGTTGGCCATTA  337

seq1  GTTAGTCTTGTTGTGGAGAAGACAGTTTAGAAATGTAAATGAGTGTTCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTCTTGTTGTGGAGAAGACAGTTTAGAAATGTAAATGAGTGTTCCT  387

seq1  GTGAGTAATATCAGTAAACTCACTAGATCACTGAGAAAAATAATCGCTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTAATATCAGTAAACTCACTAGATCACTGAGAAAAATAATCGCTAT  437

seq1  CTGTAATATGATGATGCCAAATGCTGCCACTGTTTACATATATGCTACCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATATGATGATGCCAAATGCTGCCACTGTTTACATATATGCTACCT  487

seq1  ATTTCATAGTGTATATTTACATAGCATAGTGGATGTTTATTGTTGCATGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATAGTGTATATTTACATAGCATAGTGGATGTTTATTGTTGCATGC  537

seq1  TGAATATAAATTTGTTAATACTATTATAATACAACTACATACTAGGAACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATAAATTTGTTAATACTATTATAATACAACTACATACTAGGAACA  587

seq1  GCCTTAGCTTTGATAGAAGAGTTTCTCAGCAGTCCTGATTCTTGATTTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAGCTTTGATAGAAGAGTTTCTCAGCAGTCCTGATTCTTGATTTAT  637

seq1  GTGGTCAATTTATGCCTACCATTTGTAGAGAGGCACACACCTAGTCTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCAATTTATGCCTACCATTTGTAGAGAGGCACACACCTAGTCTTTT  687

seq1  CTGTAAGACATTAATCTAGCTTGTCAGTCTGCTGTGTAGCAACTGAGCTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGACATTAATCTAGCTTGTCAGTCTGCTGTGTAGCAACTGAGCTT  737

seq1  ACTCTCCCTAAAGAAGGCTTCTGTGACAGAGTTGCTTGCAGTGTGTTCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCCTAAAGAAGGCTTCTGTGACAGAGTTGCTTGCAGTGTGTTCTG  787

seq1  GATCAGTGCTCACAGGGAACAAGTTTCCTTGCCACCCTCTTTCTGCACCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTGCTCACAGGGAACAAGTTTCCTTGCCACCCTCTTTCTGCACCA  837

seq1  AAATGACAGAAACCGTTAGAGAAATGTGTTAGTGGAAATTATCATGGTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACAGAAACCGTTAGAGAAATGTGTTAGTGGAAATTATCATGGTTT  887

seq1  TATAGAAAGTCAGAACACTCTCATGAATAATAGAACACTGTTGGTAAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAAGTCAGAACACTCTCATGAATAATAGAACACTGTTGGTAAAAT  937

seq1  CTCAGACCTCTATTTCTTAATATAAATGGTGCTTCTCTTTCTTTCTTTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACCTCTATTTCTTAATATAAATGGTGCTTCTCTTTCTTTCTTTGA  987

seq1  AAGTGTAAATACTATTTTATGCATTTTAAGTTATAAGCATTTAAAATAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAAATACTATTTTATGCATTTTAAGTTATAAGCATTTAAAATAGG  1037

seq1  AAATATATATGGAAATTCTTTTTGTGTAGCTGTGACATTAAGCTTTCTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATATGGAAATTCTTTTTGTGTAGCTGTGACATTAAGCTTTCTTT  1087

seq1  CCTTTTCAAAAACAGGCAGAACTAATCAAATTATGGAATTC  1140
      |||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCAAAAACAGGCAGAACTAATCAAATTATGGAATTC  1128