BAC Information

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BAC

Clone NameB6Ng01-030E16
Chromosome15 (Build37)
Map Location 38,727,399 - 38,838,216
singlet/doubletdoublet
Overlap geneBaalc, TOB3L, Fzd6
Upstream geneLOC667534, Rrm2b, LOC100041478, Edd1, Odf1, LOC382986, LOC667563, Klf10, Azin1, Siah1-ps2, Atp6v1c1
Downstream geneLOC636952, Cthrc1, Slc25a32, Wdsof1, LOC671215, Rims2, Tm7sf4, Dpys, Lrp12, LOC100039130, LOC670013
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030E16.bB6Ng01-030E16.g
ACCDH860245DH860246
length1,076969
definitionDH860245|Mus musculus domesticus DNA, BAC clone: B6Ng01-030E16, 5' end.DH860246|Mus musculus domesticus DNA, BAC clone: B6Ng01-030E16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,727,399 - 38,728,486)(38,837,235 - 38,838,216)
sequence
gaattcaaggcagccaagactgcctgagccttccaggctcctctcttctc
cacccgttaagttggttacacactcatgtggagaataaagggatgaacaa
gctacagagaaatcatgttcaggtatagagtgtagctcagtaggtagact
atagagagctcagttgggtgcttagtagttgggtgcttagtagttgggtg
cttagtagttgggtgcttgagtagtgtgctctgattcttagcactgaata
aaacaggcatggtggtgcaagtttataatcctagcacttgtgaggtagag
ggaagaggatgagaagctccagatgggacctggagagatggcttgatcag
taaagtgtctgccatgcaaagattcagacctgtgttcgaacccttggtaa
ccacataacagtctgctgtggttgcatgagtgtctgtaaccctagcctag
ggagcacagaggcaggtggacccctgggacttgctggctagccagtctag
ccaatcactgagctctttgagttcaatgagatcctgtctcaaaaagacaa
ggtggagagtaagagtagagttaactgtagcctctatacataaacatggc
catctgcatacatgtgcacacatacattacacacatactacacagaggtt
caaagttattcttagctgcctagcaagcctgaggccagcctgagcaacct
gataccctgtctgaaaataaattaataaacaaaaaacctaacaaaagaag
aaaggaaatcattttcactagaagtttgtggctgagatgctcatgccagt
caagtttactctacagctttggggactcaggaccaaggtgttctcatggg
tcttgctgcagctacgtagcttgttagccacagaagtgaatgcatttctt
gcctttaaaaggggaatttggttttggcaacaagtactttgatatttctt
taatcctgctactgttctacttatattgaagacccgttagctatgtgcat
ccctatgtcgcgaggattgtcccattcatagatgaggcccaagcccttct
gtgtggtttcccttacatgccgatgt
gaattccacccagcgcaaaccttccacggtcagctcatggggactgcggg
aggctcccctgagcccccggggtcccgcgtcgggcacctgttcccggcct
gcagccgagcagctccgtccccggcctgcggggacccagagtcactttcc
aggagttgcgtgggactccgaggcgacgcacctgcggctccgatcccggc
cgctgcccgcccgccccgtcgggccggggacgcctcacctcgggcggcag
aggaaggtggctgtccctcggcgtcgcgcggccccgccaccccagacagc
cggggcgagctttcggtggggggcagcgtccgggcctcgaccgcctccgg
ggccgcaacggggagcgagagctgggcgatcccgcgagactgcgccgcca
ggtcgggcgggcaggttggggctcgcggcggcgggaccggccctgcgccc
cgcccagcccagccggccgcggtgcgggggccgccgagctgtcgcctccg
ctcgcaccgcggacccaggcgtgagacccaggccgttggggaagtgccct
gcagagcacactttccgttctggaagcgaggagccttagccgcggggatc
tgctctgtagtgagtggtagctgagatcagagttagcgaggaacttcctg
agttcttggctgaaaagcctattaactcggggagtctggccaccaccttg
aacggcaggtgccagcttcggccggttctacagctttactgctgcaaaag
ccccacagaaagttaactgctttagtcaacgtggttttgagaaccagctc
tgccaccatcactcagataatttaccaaaaggggcgtggggatgtgtgag
tcctctctatgtagaatgattaatgatacagatagttactatttttgagt
cctttacatccatatgcctgatatgtaggactctggtataggtacaatgg
aacctgttgcaacacaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_38727399_38728486
seq2: B6Ng01-030E16.b_44_1119

seq1  GAATTCAAGGCAGCCAAGACTGCCTGAGCCTTCCAGGCTCCTCTCTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCAGCCAAGACTGCCTGAGCCTTCCAGGCTCCTCTCTTCTC  50

seq1  CACCCGTTAAGTTGGTTACACACTCATGTGGAGAATAAAGGGATGAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCGTTAAGTTGGTTACACACTCATGTGGAGAATAAAGGGATGAACAA  100

seq1  GCTACAGAGAAATCATGTTCAGGTATAGAGTGTAGCTCAGTAGGTAGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGAGAAATCATGTTCAGGTATAGAGTGTAGCTCAGTAGGTAGACT  150

seq1  ATAGAGAGCTCAGTTGGGTGCTTAGTAGTTGGGTGCTTAGTAGTTGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAGCTCAGTTGGGTGCTTAGTAGTTGGGTGCTTAGTAGTTGGGTG  200

seq1  CTTAGTAGTTGGGTGCTTGAGTAGTGTGCTCTGATTCTTAGCACTGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTAGTTGGGTGCTTGAGTAGTGTGCTCTGATTCTTAGCACTGAATA  250

seq1  AAACAGGCATGGTGGTGCAAGTTTATAATCCTAGCACTTGTGAGGTAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGCATGGTGGTGCAAGTTTATAATCCTAGCACTTGTGAGGTAGAG  300

seq1  GGAAGAGGATGAGAAGCTCCAGATGGGACCTGGAGAGATGGCTTGATCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGGATGAGAAGCTCCAGATGGGACCTGGAGAGATGGCTTGATCAG  350

seq1  TAAAGTGTCTGCCATGCAAAGATTCAGACCTGTGTTCGAACCCTTGGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGTCTGCCATGCAAAGATTCAGACCTGTGTTCGAACCCTTGGTAA  400

seq1  CCACATAACAGTCTGCTGTGGTTGCATGAGTGTCTGTAACCCTAGCCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATAACAGTCTGCTGTGGTTGCATGAGTGTCTGTAACCCTAGCCTAG  450

seq1  GGAGCACAGAGGCAGGTGGACCCCTGGGACTTGCTGGCTAGCCAGTCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCACAGAGGCAGGTGGACCCCTGGGACTTGCTGGCTAGCCAGTCTAG  500

seq1  CCAATCACTGAGCTCTTTGAGTTCAATGAGATCCTGTCTCAAAAAGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCACTGAGCTCTTTGAGTTCAATGAGATCCTGTCTCAAAAAGACAA  550

seq1  GGTGGAGAGTAAGAGTAGAGTTAACTGTAGCCTCTATACATAAACATGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGAGTAAGAGTAGAGTTAACTGTAGCCTCTATACATAAACATGGC  600

seq1  CATCTGCATACATGTGCACACATACATTACACACATACTACACAGAGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCATACATGTGCACACATACATTACACACATACTACACAGAGGTT  650

seq1  CAAAGTTATTCTTAGCTGCCTAGCAAGCCTGAGGCCAGCCTGAGCAACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTATTCTTAGCTGCCTAGCAAGCCTGAGGCCAGCCTGAGCAACCT  700

seq1  GATACCCTGTCTGAAAATAAATTAATAAACAAAAAACCTAACAAAAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCCTGTCTGAAAATAAATTAATAAACAAAAAACCTAACAAAAGAAG  750

seq1  AAAGGAAATCATTTTCACTAGAAGTTTGTGGCTGAGATGCTCATGCCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAATCATTTTCACTAGAAGTTTGTGGCTGAGATGCTCATGCCAGT  800

seq1  CAAGTTTACTCTACAGCTTTGGGGACTCAAGACCAAGGTG-TCTCAT-GG  848
      ||||||||||||||||||||||||||||| |||||||||| |||||| ||
seq2  CAAGTTTACTCTACAGCTTTGGGGACTCAGGACCAAGGTGTTCTCATGGG  850

seq1  TCTTGCTTGCAGCTACGTAGCTTGTTAGCCACAGAAGTGAATGCATTTTC  898
      |||||| |||||||||||||||||||||||||||||||||||||| ||||
seq2  TCTTGC-TGCAGCTACGTAGCTTGTTAGCCACAGAAGTGAATGCA-TTTC  898

seq1  TTGCCTTTAAAAGGGGAATTTGGTTTTTGGCCAACAAGTACTTTGATATT  948
      |||||||||||||||||||||||||||  | ||||||||||||||||| |
seq2  TTGCCTTTAAAAGGGGAATTTGGTTTT--GGCAACAAGTACTTTGATA-T  945

seq1  TTCTTTACTCCTGCTACTGTTCTAACTATATTGTAAGACCCGTTAGGCGA  998
      ||||||| ||||||||||||||||  ||||||| ||||||||||| || |
seq2  TTCTTTAATCCTGCTACTGTTCTACTTATATTG-AAGACCCGTTA-GCTA  993

seq1  TGTGGCATCCCTATGCAGCGAGGATGTCCCCACTCAACAGATGAGGCCCC  1048
      ||| |||||||||||  ||||||||   |||| || | ||||||||  ||
seq2  TGT-GCATCCCTATGTCGCGAGGATTGTCCCATTC-ATAGATGAGG--CC  1039

seq1  CAAGCCCTCTCTGTGTTGGTTTCCTTACAATGCCTGATGT  1088
      |||||||| ||||||| | || |||||| ||||| |||||
seq2  CAAGCCCT-TCTGTGTGGTTTCCCTTAC-ATGCC-GATGT  1076

seq1: chr15_38837235_38838216
seq2: B6Ng01-030E16.g_67_1035 (reverse)

seq1  CTTTGTGTTTGCCAACAAGTTCCTTTGTACCTCATACCAGAGTCCTACAT  50
      |||||||||   ||||| ||||| |||||||| |||||||||||||||||
seq2  CTTTGTGTT--GCAACAGGTTCCATTGTACCT-ATACCAGAGTCCTACAT  47

seq1  ATCAGGCATTATTGAATGTAAAGGACTCAAAAATTAGTAACCATTCTTGT  100
      |||||||||   || |||||||||||||||||| ||||||| ||   |||
seq2  ATCAGGCAT--ATGGATGTAAAGGACTCAAAAA-TAGTAACTAT--CTGT  92

seq1  ATTCATTTATCATGTCTACATAGAGAGGACTCTACACATCCCCACGCCCC  150
      | ||||| ||||| |||||||||||||||||| |||||||||||||||||
seq2  A-TCATTAATCAT-TCTACATAGAGAGGACTC-ACACATCCCCACGCCCC  139

seq1  TTTTTGGTAATTTATCTGAAGTGATGGTGGCAGAGCTGGTTCTCAAAACC  200
       ||||||||| ||||||| |||||||||||||||||||||||||||||||
seq2  -TTTTGGTAAATTATCTG-AGTGATGGTGGCAGAGCTGGTTCTCAAAACC  187

seq1  ACGTTGACTAAAGCAGTTAACTTTCTGTGGGGCTTTTGCAGCAGTAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGACTAAAGCAGTTAACTTTCTGTGGGGCTTTTGCAGCAGTAAAGC  237

seq1  TGTAGAACCGGCCGAAGCTGGCACCTGCCGTTCAAGGTGGTGGCCAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAACCGGCCGAAGCTGGCACCTGCCGTTCAAGGTGGTGGCCAGACT  287

seq1  CCCCGAGTTAATAGGCTTTTCAGCCAAGAACTCAGGAAGTTCCTCGCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGAGTTAATAGGCTTTTCAGCCAAGAACTCAGGAAGTTCCTCGCTAA  337

seq1  CTCTGATCTCAGCTACCACTCACTACAGAGCAGATCCCCGCGGCTAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATCTCAGCTACCACTCACTACAGAGCAGATCCCCGCGGCTAAGGC  387

seq1  TCCTCGCTTCCAGAACGGAAAGTGTGCTCTGCAGGGCACTTCCCCAACGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGCTTCCAGAACGGAAAGTGTGCTCTGCAGGGCACTTCCCCAACGG  437

seq1  CCTGGGTCTCACGCCTGGGTCCGCGGTGCGAGCGGAGGCGACAGCTCGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTCTCACGCCTGGGTCCGCGGTGCGAGCGGAGGCGACAGCTCGGC  487

seq1  GGCCCCCGCACCGCGGCCGGCTGGGCTGGGCGGGGCGCAGGGCCGGTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCCGCACCGCGGCCGGCTGGGCTGGGCGGGGCGCAGGGCCGGTCCC  537

seq1  GCCGCCGCGAGCCCCAACCTGCCCGCCCGACCTGGCGGCGCAGTCTCGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCCGCGAGCCCCAACCTGCCCGCCCGACCTGGCGGCGCAGTCTCGCG  587

seq1  GGATCGCCCAGCTCTCGCTCCCCGTTGCGGCCCCGGAGGCGGTCGAGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCGCCCAGCTCTCGCTCCCCGTTGCGGCCCCGGAGGCGGTCGAGGCC  637

seq1  CGGACGCTGCCCCCCACCGAAAGCTCGCCCCGGCTGTCTGGGGTGGCGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACGCTGCCCCCCACCGAAAGCTCGCCCCGGCTGTCTGGGGTGGCGGG  687

seq1  GCCGCGCGACGCCGAGGGACAGCCACCTTCCTCTGCCGCCCGAGGTGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCGCGACGCCGAGGGACAGCCACCTTCCTCTGCCGCCCGAGGTGAGG  737

seq1  CGTCCCCGGCCCGACGGGGCGGGCGGGCAGCGGCCGGGATCGGAGCCGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCCGGCCCGACGGGGCGGGCGGGCAGCGGCCGGGATCGGAGCCGCA  787

seq1  GGTGCGTCGCCTCGGAGTCCCACGCAACTCCTGGAAAGTGACTCTGGGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCGTCGCCTCGGAGTCCCACGCAACTCCTGGAAAGTGACTCTGGGTC  837

seq1  CCCGCAGGCCGGGGACGGAGCTGCTCGGCTGCAGGCCGGGAACAGGTGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCAGGCCGGGGACGGAGCTGCTCGGCTGCAGGCCGGGAACAGGTGCC  887

seq1  CGACGCGGGACCCCGGGGGCTCAGGGGAGCCTCCCGCAGTCCCCATGAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACGCGGGACCCCGGGGGCTCAGGGGAGCCTCCCGCAGTCCCCATGAGC  937

seq1  TGACCGTGGAAGGTTTGCGCTGGGTGGAATTC  982
      ||||||||||||||||||||||||||||||||
seq2  TGACCGTGGAAGGTTTGCGCTGGGTGGAATTC  969