BAC Information

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BAC

Clone NameB6Ng01-030F05
Chromosome15 (Build37)
Map Location 40,573,720 - 40,755,411
singlet/doubletdoublet
Overlap geneZfpm2
Upstream geneTm7sf4, Dpys, Lrp12, LOC100039130, LOC670013, LOC664872, Ppia-ps25
Downstream geneOxr1, Abra, EG432946
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030F05.bB6Ng01-030F05.g
ACCDH860268DH860269
length257619
definitionDH860268|Mus musculus domesticus DNA, BAC clone: B6Ng01-030F05, 5' end.DH860269|Mus musculus domesticus DNA, BAC clone: B6Ng01-030F05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,573,720 - 40,573,976)(40,754,795 - 40,755,411)
sequence
gaattctttctgctcaggtcttctttcattggctggccagctctgcctgc
cacagcgacatactcctcatctcttccacaatgttaggtccccacaagag
gaggatgagaatgtgttggcattaagaactcttacactatgagacccaag
caacaggctatgatttaaacatttgagatgctgttgcttgagctttttct
tagtttttgttttttttgttgttgttgttgttggttttttgttttatttt
ggttttg
gaattctaaagcaaggaaaccagggacagtggcatttcaagacagtcacg
tggtctttttttatttgttgttgcatcttggttcaattttgaggcagttc
cccagtgagtattctagactttcagtagcttcacacttggttctctgagt
tcgattacagttactgtactcccaaatgatgttagtgtgattagaatctg
atttcagaatgggttcgtttaatcaattagctgaaggtttggctacatgc
agtttctccctgttaattatgtaaggtctgtctctgcaacagggttccta
aaattgagtctgtgaaggatgcattagtggacttcataattggatatata
tatatatatatatatatatatatatatatagtaattggttgctacaagtc
agaaagctccaaggtttttctctagggtgttacatataaagacttcttga
aaggacttcattatctttcttggtccatcccaagaaattaaaactaattt
ttttgaataagggaactgttaaacaaggaaggagatattttttaaataat
caacatttttggaaatatgactagagttgttttaatctgagaagttgggg
tactggaggatggctttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_40573720_40573976
seq2: B6Ng01-030F05.b_41_297

seq1  GAATTCTTTCTGCTCAGGTCTTCTTTCATTGGCTGGCCAGCTCTGCCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGCTCAGGTCTTCTTTCATTGGCTGGCCAGCTCTGCCTGC  50

seq1  CACAGCGACATACTCCTCATCTCTTCCACAATGTTAGGTCCCCACAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCGACATACTCCTCATCTCTTCCACAATGTTAGGTCCCCACAAGAG  100

seq1  GAGGATGAGAATGTGTTGGCATTAAGAACTCTTACACTATGAGACCCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGAGAATGTGTTGGCATTAAGAACTCTTACACTATGAGACCCAAG  150

seq1  CAACAGGCTATGATTTAAACATTTGAGATGCTGTTGCTTGAGCTTTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGCTATGATTTAAACATTTGAGATGCTGTTGCTTGAGCTTTTTCT  200

seq1  TAGTTTTTGTTTTTTTTGTTGTTGTTGTTGTTGGTTTTTTGTTTTATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTTGTTTTTTTTGTTGTTGTTGTTGTTGGTTTTTTGTTTTATTTT  250

seq1  GGTTTTG  257
      |||||||
seq2  GGTTTTG  257

seq1: chr15_40754795_40755411
seq2: B6Ng01-030F05.g_65_683 (reverse)

seq1  ACAAAGCCATCCTCCAGTACCCCAACTTCTCAGATTAAAACAACTCTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCCATCCTCCAGTACCCCAACTTCTCAGATTAAAACAACTCTAGT  50

seq1  CATATTTCC-AAAATGTTGATTATTT-AAAAATATCTCCTTCCTTGTTTA  98
      ||||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  CATATTTCCAAAAATGTTGATTATTTAAAAAATATCTCCTTCCTTGTTTA  100

seq1  ACAGTTCCCTTATTCAAAAAAATTAGTTTTAATTTCTTGGGATGGACCAA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCCCTTATTCAAAAAAATTAGTTTTAATTTCTTGGGATGGACCAA  150

seq1  GAAAGATAATGAAGTCCTTTCAAGAAGTCTTTATATGTAACACCCTAGAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATAATGAAGTCCTTTCAAGAAGTCTTTATATGTAACACCCTAGAG  200

seq1  AAAAACCTTGGAGCTTTCTGACTTGTAGCAACCAATTACTATATATATAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCTTGGAGCTTTCTGACTTGTAGCAACCAATTACTATATATATAT  250

seq1  ATATATATATATATATATATATATATCCAATTATGAAGTCCACTAATGCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATCCAATTATGAAGTCCACTAATGCA  300

seq1  TCCTTCACAGACTCAATTTTAGGAACCCTGTTGCAGAGACAGACCTTACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCACAGACTCAATTTTAGGAACCCTGTTGCAGAGACAGACCTTACA  350

seq1  TAATTAACAGGGAGAAACTGCATGTAGCCAAACCTTCAGCTAATTGATTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAACAGGGAGAAACTGCATGTAGCCAAACCTTCAGCTAATTGATTA  400

seq1  AACGAACCCATTCTGAAATCAGATTCTAATCACACTAACATCATTTGGGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAACCCATTCTGAAATCAGATTCTAATCACACTAACATCATTTGGGA  450

seq1  GTACAGTAACTGTAATCGAACTCAGAGAACCAAGTGTGAAGCTACTGAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTAACTGTAATCGAACTCAGAGAACCAAGTGTGAAGCTACTGAAA  500

seq1  GTCTAGAATACTCACTGGGGAACTGCCTCAAAATTGAACCAAGATGCAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGAATACTCACTGGGGAACTGCCTCAAAATTGAACCAAGATGCAAC  550

seq1  AACAAATAAAAAAAGACCACGTGACTGTCTTGAAATGCCACTGTCCCTGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATAAAAAAAGACCACGTGACTGTCTTGAAATGCCACTGTCCCTGG  600

seq1  TTTCCTTGCTTTAGAATTC  617
      |||||||||||||||||||
seq2  TTTCCTTGCTTTAGAATTC  619