BAC Information

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BAC

Clone NameB6Ng01-030G12
Chromosome15 (Build37)
Map Location 44,925,414 - 44,926,226
singlet/doubletsinglet
Overlap genenone
Upstream geneTrhr, LOC665041, Nudcd1, Eny2, Pkhd1l1, Ebag9, 5730410E15Rik, A930017M01Rik, EG432950
Downstream geneKcnv1, LOC100039389, EG432951
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030G12.bB6Ng01-030G12.g
ACCDH860327DH860328
length1,236963
definitionDH860327|Mus musculus domesticus DNA, BAC clone: B6Ng01-030G12, 5' end.DH860328|Mus musculus domesticus DNA, BAC clone: B6Ng01-030G12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatactttccaaggtgagttaatgccaatactcccccaaattat
cccagaaaatagaagtagaagtggcattgtccaattgatttcaggaggtc
acagttatcctgatacctaagcaatccaaagtcccatcagagaaaagcac
ttttagaccaattttcttatgaacatagattcaaaaattatcaataaaat
cctcagaaagtgtacccaaatcacatcaaaaataccagcagcaaccatga
tcatgtaggcttcttcccacagatgtaggaatgcttcaagacacataaat
tgggaaatatactccacaatttgaatgtaattgaatttgaataaattgaa
agaaaaaaatgagatgatcatctgaataggtacataaaaaaaaaaccttt
tacaaaatccaacactactccatgataaaaattttggagagatgaaggat
aaatgggaaattcttaaagaaaataaaggcagtttacaggtctatatcta
acatcaaattaaatggaaaggaaactcaaagcaattccaattaaatcggt
aagaagacaagactttctactctctccatatatattcaatataatgcaag
aagtcagagaaagagaaaagaactgaaggatatgaaagagatacaaattg
gaaaggaagaaattaaagtgctactattttcaaatgacatgaaagtatac
ataaataacctgaaaattctacctggaaactcctacagctgacagtaact
agatacaaaattacctgacaaaaatcagtagtccttttataagcaaatga
tgatgagcagattgagaaagataaggaaaataacatattttacaataatc
tcaagtaatctaaaatatcttagggtaattctaaccaagaaatgaaagac
ttgtatggtagaacttcaaatcttagaagagaattagaaacgttgccggg
agattgaagtccccccatgctcatgagtagtagataacagtaggatggca
ttctactccccaatatctattcattcagtgcatctccataaatgtcacat
tctcacaatcttgagaaagttttcacctcttgtgaacaagagacgggtag
ctaaccaacttgtagcgaagtctggaactcatatctgattctagttacac
tccggctattattatggatggatggttaaaagaccgtgtatgatatgaat
cgactactgaaccgatttaagtgccaaatactctga
gaattcaaataactctgagtgactgtgacactataaattcacacacacac
acacacacacacacacacacacacacacacacacacacttgttatcattg
ctaaaagcccatgttttagctttgcttttcagttttgagtccctcttatc
tctgctcaaactcatatatttctggactcctatcacaagtctagaacaac
aatattggaggttccttttgttatgttagggattgactctaggaccttac
atacacatgactttggtgatgtgacatcatgacatgaagagaagagggct
cctgcaggatgtggttcccaaagacctgccttggtttggagaggtgttct
aagagaagtggtgtctgggagatgaaaacaaaggactcaactcaaattgc
gggtctgagctgacaacctatgctctgtgggagacagctttccaacttag
tttttctctgttctgctatctttctcttagatctgctttctccaagaagc
tgtctcgtgctatgctaaaaaattctctggatagctcatgtcctgtagat
catacgtctagtcttttattttacatatcaattcagtcatttatttctgg
tttctttttgaattctcaaaaggatcagtatggtgagcccagtcctttaa
ttcttaggagacagcaagcatatattttaacattgcaaaaataatttcag
agatctgcccgactcagttaaacacagatactaagctaggtgggtgagac
ctcattctgaaattaccatttctaccacacctgggtctaaccttgctctg
tcgcagctgatcctgaactcaagaatttgtctgtctttgcataaacaaaa
tacttagctaagtagaatcaccagtaatcatcactcccaaaatttctgtt
tcctttcttagtatatttttgacaggtgactcatagtgtagcagactcta
tttctttagattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_44925414_44926226
seq2: B6Ng01-030G12.g_67_879

seq1  GAATTCAAATAACTCTGAGTGACTGTGACACTATAAATTCACACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATAACTCTGAGTGACTGTGACACTATAAATTCACACACACAC  50

seq1  ACACACACACACACACACACACACACACACACACACACTTGTTATCATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACTTGTTATCATTG  100

seq1  CTAAAAGCCCATGTTTTAGCTTTGCTTTTCAGTTTTGAGTCCCTCTTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGCCCATGTTTTAGCTTTGCTTTTCAGTTTTGAGTCCCTCTTATC  150

seq1  TCTGCTCAAACTCATATATTTCTGGACTCCTATCACAAGTCTAGAACAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCAAACTCATATATTTCTGGACTCCTATCACAAGTCTAGAACAAC  200

seq1  AATATTGGAGGTTCCTTTTGTTATGTTAGGGATTGACTCTAGGACCTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGGAGGTTCCTTTTGTTATGTTAGGGATTGACTCTAGGACCTTAC  250

seq1  ATACACATGACTTTGGTGATGTGACATCATGACATGAAGAGAAGAGGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACATGACTTTGGTGATGTGACATCATGACATGAAGAGAAGAGGGCT  300

seq1  CCTGCAGGATGTGGTTCCCAAAGACCTGCCTTGGTTTGGAGAGGTGTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGGATGTGGTTCCCAAAGACCTGCCTTGGTTTGGAGAGGTGTTCT  350

seq1  AAGAGAAGTGGTGTCTGGGAGATGAAAACAAAGGACTCAACTCAAATTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGTGGTGTCTGGGAGATGAAAACAAAGGACTCAACTCAAATTGC  400

seq1  GGGTCTGAGCTGACAACCTATGCTCTGTGGGAGACAGCTTTCCAACTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGAGCTGACAACCTATGCTCTGTGGGAGACAGCTTTCCAACTTAG  450

seq1  TTTTTCTCTGTTCTGCTATCTTTCTCTTAGATCTGCTTTCTCCAAGAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCTGTTCTGCTATCTTTCTCTTAGATCTGCTTTCTCCAAGAAGC  500

seq1  TGTCTCGTGCTATGCTAAAAAATTCTCTGGATAGCTCATGTCCTGTAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCGTGCTATGCTAAAAAATTCTCTGGATAGCTCATGTCCTGTAGAT  550

seq1  CATACGTCTAGTCTTTTATTTTACATATCAATTCAGTCATTTATTTCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACGTCTAGTCTTTTATTTTACATATCAATTCAGTCATTTATTTCTGG  600

seq1  TTTCTTTTTGAATTCTCAAAAGGATCAGTATGGTGAGCCCAGTCCTTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTGAATTCTCAAAAGGATCAGTATGGTGAGCCCAGTCCTTTAA  650

seq1  TTCTTAGGAGACAGCAAGCATATATTTTAACATTGCAAAAATAA-TTCAG  699
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTCTTAGGAGACAGCAAGCATATATTTTAACATTGCAAAAATAATTTCAG  700

seq1  AGATCTGCCCGACTCAGTTAAACACAGATACTAAGCTAGGTGGGTGAGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGCCCGACTCAGTTAAACACAGATACTAAGCTAGGTGGGTGAGAC  750

seq1  CTCATTCTGAAATTACCATTTCTACCACACCTGGGTCTAACCTTGCTCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCTGAAATTACCATTTCTACCACACCTGGGTCTAACCTTGCTCTG  800

seq1  TCGCAGGCTGATCC  813
      ||||| ||||||||
seq2  TCGCA-GCTGATCC  813