BAC Information

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BAC

Clone NameB6Ng01-034B02
Chromosome15 (Build37)
Map Location 95,956,781 - 96,075,082
singlet/doubletdoublet
Overlap geneLOC100043335, EG667869, LOC667874
Upstream geneLOC100043315, Nell2, Dbx2, LOC100042684, LOC667849, EG629300, LOC667864, Tmem16f, LOC100043329, D030018L15Rik
Downstream geneLOC667894, Arid2, Sfrs2ip, Slc38a1, Slc38a2, LOC667941, LOC546651, Slc38a4, Amigo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034B02.bB6Ng01-034B02.g
ACCDH862936DH862937
length9661,160
definitionDH862936|Mus musculus domesticus DNA, BAC clone: B6Ng01-034B02, 5' end.DH862937|Mus musculus domesticus DNA, BAC clone: B6Ng01-034B02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,956,781 - 95,957,742)(96,073,905 - 96,075,082)
sequence
gaattccccaattgctacctgttgtgctcatggtccccccccccctgcgt
tttaattgtttaactggcagagaaaataaatccaatcaagacacactgga
caataaagtaactgaaggaactcccattatctccactaaaggggaagagg
ctagggctggatgtgattgtggacttctactcttacatcacgagcggggt
ggtggctgacccaccaggcagtaaagctgagtgtgcttacaatgcttcac
cctcaaacagaaatgacaagcatgtgatgacgtccctgccatgagcaggt
cccgaggcacacgtggggattatgatgggcccaattgtccataggttcca
ctcccgctactctaagcctacacttgcaacttcatgggacagtcccgatg
agccagcagttgacagggagaagactcagactgggcttatagatggttct
gcttgctagacctgcagaaaactggccaaatgttcggttctctactgatc
catgagctatgcccaatggctccgctgggataagagacatgaaagatgaa
aagagcatgtgggaagttgccaacaaagaattttggggggaaagatgggt
gaactggcctttctgaatgaagaaaaactatgaagatgatagtgtctcgc
atatatactgaaaggtgacttttagcagagacgtgaggaattagattaat
tgagggtaggaatgctcctccaccaaccaaccaacccgtcaacagcccgt
gagctcatgagtgaattagctattagtggtcaggaaaggagtttatgcat
ggagtcagcaacgtggggctttaacttcccaggtcgaccacttctattag
cagcatgagggtcctagttagccagcatcaaagactgactggagccatta
tctggggtacataccagttctagcaacagtagattctttcacgctattat
agtcctatgtggggga
gaattccatttgcgtatcttttatttaggattttatttctgtattcttcg
ttggtatttttaacctgattcggaactgtttcctggatgtttaaaagact
gtgtcattgcaaatatcaggggcttgaaaatagacacacacccagtggcc
taggaatctgggatgccttccacacagcaaccgtaatgagcaactctttt
agtccttagtaaaaataggaaagaagagtccccacccctcctgtcctaag
ttattctactgcttcctccggcctccagctgggaagatggaaactggaga
aagcttgatcagcattggtgccctgtgtccaatccaagagcctagaccat
cgcgtctccaccctcctgatgctgtgaccctttgatgtagttccccgtgt
tgtgatgatccccaaccataaaatgattttccttgctccttcataactgt
aaatttgctactattacgaatcacaatgtaaatatctgacatgcagatgg
tcttaggtgactccagtgtataaaaggtgtttgatcctccgaggcatggt
tgagaacccctggcctagaccctttcagaaaaggtttttgctctttcttt
aaagtgactgggaacaagccactttgactttttgaagagaagcatgaaat
aaacaaattagacttaaattaatacctgggcttaggatattcctgccagt
aaagtgcttgccattccaacatgaggacccaaatctgtagcctcagtatt
catgtacaaacaggtgctgcaccatgcacctgtcccccagggcctgggga
ggtagaaacagcaaggttcctaggaactgctggccagcttgtctggctag
tcactgaactccatgctgagcagaagaggatctctcaaaagataacgtga
gagtgattcagcaagacacccaacaccaacaaatgacttcatgtgtcaca
cacacacatacacacacataaacacatccaattcatttgaatatcttata
ttgtgggtaccttttttaaatagaaaactcagatgatcttattggcacct
tagttttagttactgggcggtatgggcccatgcctttatcccgaactctg
ggagcaaggcaggcggccatatctctgagtcagacagcctgtccagacag
gtctagaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_95956781_95957742
seq2: B6Ng01-034B02.b_42_1007

seq1  GAATTCCCCAATTGCTACCTGTTGTGCTCATGGTCCCCCCCCCCCTGCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCAATTGCTACCTGTTGTGCTCATGGTCCCCCCCCCCCTGCGT  50

seq1  TTTAATTGTTTAACTGGCAGAGAAAATAAATCCAATCAAGACACACTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGTTTAACTGGCAGAGAAAATAAATCCAATCAAGACACACTGGA  100

seq1  CAATAAAGTAACTGAAGGAACTCCCATTATCTCCACTAAAGGGGAAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAGTAACTGAAGGAACTCCCATTATCTCCACTAAAGGGGAAGAGG  150

seq1  CTAGGGCTGGATGTGATTGTGGACTTCTACTCTTACATCACGAGCGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGCTGGATGTGATTGTGGACTTCTACTCTTACATCACGAGCGGGGT  200

seq1  GGTGGCTGACCCACCAGGCAGTAAAGCTGAGTGTGCTTACAATGCTTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTGACCCACCAGGCAGTAAAGCTGAGTGTGCTTACAATGCTTCAC  250

seq1  CCTCAAACAGAAATGACAAGCATGTGATGACGTCCCTGCCATGAGCAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAACAGAAATGACAAGCATGTGATGACGTCCCTGCCATGAGCAGGT  300

seq1  CCCGAGGCACACGTGGGGATTATGATGGGCCCAATTGTCCATAGGTTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGGCACACGTGGGGATTATGATGGGCCCAATTGTCCATAGGTTCCA  350

seq1  CTCCCGCTACTCTAAGCCTACACTTGCAACTTCATGGGACAGTCCCGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGCTACTCTAAGCCTACACTTGCAACTTCATGGGACAGTCCCGATG  400

seq1  AGCCAGCAGTTGACAGGGAGAAGACTCAGACTGGGCTTATAGATGGTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCAGTTGACAGGGAGAAGACTCAGACTGGGCTTATAGATGGTTCT  450

seq1  GCTTGCTAGACCTGCAGAAAACTGGCCAAATGTTCGGTTCTCTACTGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTAGACCTGCAGAAAACTGGCCAAATGTTCGGTTCTCTACTGATC  500

seq1  CATGAGCTATGCCCAATGGCTCCGCTGGGATAAGAGACATGAAAGATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCTATGCCCAATGGCTCCGCTGGGATAAGAGACATGAAAGATGAA  550

seq1  AAGAGCATGTGGGAAGTTGCCAACAAAGAA-TTTGGGGGGAAAGATGGGT  599
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAGAGCATGTGGGAAGTTGCCAACAAAGAATTTTGGGGGGAAAGATGGGT  600

seq1  GAACTGGCCTTTCTGAATGAAGAAAAACTATGAAGATGATAGTGTCTCGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGCCTTTCTGAATGAAGAAAAACTATGAAGATGATAGTGTCTCGC  650

seq1  ATATATACTGAAAGGTGAC-TTTAGCAGAGACGTGAGGAATTAGATTAAT  698
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATATATACTGAAAGGTGACTTTTAGCAGAGACGTGAGGAATTAGATTAAT  700

seq1  TGAGGGTA-GAATGCT-CTCCACCAAACCAACCAACCCGTCAACAGCCCG  746
      |||||||| ||||||| ||||||| |||||||||||||||||||||||||
seq2  TGAGGGTAGGAATGCTCCTCCACC-AACCAACCAACCCGTCAACAGCCCG  749

seq1  TGAGCTCATGAGTGAATTAGCTA-TAGT-GTCAGGAAAGGAGTTTATGCA  794
      ||||||||||||||||||||||| |||| |||||||||||||||||||||
seq2  TGAGCTCATGAGTGAATTAGCTATTAGTGGTCAGGAAAGGAGTTTATGCA  799

seq1  TGGAGTCAGCAACGT-GGGCTTTAACTTCCCAGGTCGACAAC-TCTATTA  842
      ||||||||||||||| ||||||||||||||||||||||| || |||||||
seq2  TGGAGTCAGCAACGTGGGGCTTTAACTTCCCAGGTCGACCACTTCTATTA  849

seq1  GCAGCATGA-GGTCCTAGTTAGCCAGCATCAGAGACTGACT-GAGCCATT  890
      ||||||||| ||||||||||||||||||||| ||||||||| ||||||||
seq2  GCAGCATGAGGGTCCTAGTTAGCCAGCATCAAAGACTGACTGGAGCCATT  899

seq1  ATCTGGGGTAACATACCAGTTCCTAGCAACAGGTAGATTCTATCACGCTA  940
      ||||||||| ||||||||||| ||||||||| ||||||||| ||||||| 
seq2  ATCTGGGGT-ACATACCAGTT-CTAGCAACA-GTAGATTCTTTCACGCT-  945

seq1  ATTATAGTTCTAGTGTGGGGAA  962
      |||||||| ||| ||||||| |
seq2  ATTATAGTCCTA-TGTGGGGGA  966

seq1: chr15_96073905_96075082
seq2: B6Ng01-034B02.g_67_1226 (reverse)

seq1  AGTTCTAGAACTTGCTCTGTGGACAGGCTGTCCTAGAACTCAGAGATGTG  50
      |||||||||     || | |||||||||||||     |||||||||| ||
seq2  AGTTCTAGA----CCTGTCTGGACAGGCTGTC---TGACTCAGAGATATG  43

seq1  CCTGCCTGCCTCTGCCTCCAGAGTTCTGGGATTAAAGGCATGTGCCACTA  100
       | |||||||| |||  ||||||||| |||| |||||||||| |||  ||
seq2  GCCGCCTGCCT-TGCTCCCAGAGTTC-GGGA-TAAAGGCATGGGCCCATA  90

seq1  CTGCCCAGTTAAATTTAAAAACTAAAGTGCCAATAAGAATCATCTTAAGT  150
      | |||||||  || |  |||||||| ||||||||||| |||||| | |||
seq2  CCGCCCAGT--AACT--AAAACTAAGGTGCCAATAAG-ATCATC-TGAGT  134

seq1  TTTCTATTTAAAAAAGGTACCCACAATATAAGATATTCAAATGAATTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTTAAAAAAGGTACCCACAATATAAGATATTCAAATGAATTGGA  184

seq1  TGTTGTTTATGTGTGTGTATGTGTGTGTGTGACACATGAAGTCATTTGTT  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TG-TGTTTATGTGTGTGTATGTGTGTGTGTGACACATGAAGTCATTTGTT  233

seq1  GGTGTTGGGTGTCTTGCTGAATCACTCTCAACCTTATCTTTTGAGAGATC  300
      ||||||||||||||||||||||||||||| || |||||||||||||||||
seq2  GGTGTTGGGTGTCTTGCTGAATCACTCTC-ACGTTATCTTTTGAGAGATC  282

seq1  CTCTTCTGCTCAGCATGGAGTTCAGTGACTAGCCAGACAAGCTGGCCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGCTCAGCATGGAGTTCAGTGACTAGCCAGACAAGCTGGCCAGC  332

seq1  AGTTCCTAGGAACCTTGCTGTTTCTACCTCCCCAGGCCCTGGGGGACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTAGGAACCTTGCTGTTTCTACCTCCCCAGGCCCTGGGGGACAGG  382

seq1  TGCATGGTGCAGCACCTGTTTGTACATGAATACTGAGGCTACAGATTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGTGCAGCACCTGTTTGTACATGAATACTGAGGCTACAGATTTGG  432

seq1  GTCCTCATGTTGGAATGGCAAGCACTTTACTGGCAGGAATATCCTAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCATGTTGGAATGGCAAGCACTTTACTGGCAGGAATATCCTAAGCC  482

seq1  CAGGTATTAATTTAAGTCTAATTTGTTTATTTCATGCTTCTCTTCAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATTAATTTAAGTCTAATTTGTTTATTTCATGCTTCTCTTCAAAAA  532

seq1  GTCAAAGTGGCTTGTTCCCAGTCACTTTAAAGAAAGAGCAAAAACCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGTGGCTTGTTCCCAGTCACTTTAAAGAAAGAGCAAAAACCTTTT  582

seq1  CTGAAAGGGTCTAGGCCAGGGGTTCTCAACCATGCCTCGGAGGATCAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGGGTCTAGGCCAGGGGTTCTCAACCATGCCTCGGAGGATCAAAC  632

seq1  ACCTTTTATACACTGGAGTCACCTAAGACCATCTGCATGTCAGATATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTATACACTGGAGTCACCTAAGACCATCTGCATGTCAGATATTTA  682

seq1  CATTGTGATTCGTAATAGTAGCAAATTTACAGTTATGAAGGAGCAAGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGATTCGTAATAGTAGCAAATTTACAGTTATGAAGGAGCAAGGAA  732

seq1  AATCATTTTATGGTTGGGGATCATCACAACACGGGGAACTACATCAAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTTTATGGTTGGGGATCATCACAACACGGGGAACTACATCAAAGG  782

seq1  GTCACAGCATCAGGAGGGTGGAGACGCGATGGTCTAGGCTCTTGGATTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGCATCAGGAGGGTGGAGACGCGATGGTCTAGGCTCTTGGATTGG  832

seq1  ACACAGGGCACCAATGCTGATCAAGCTTTCTCCAGTTTCCATCTTCCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGGCACCAATGCTGATCAAGCTTTCTCCAGTTTCCATCTTCCCAG  882

seq1  CTGGAGGCCGGAGGAAGCAGTAGAATAACTTAGGACAGGAGGGGTGGGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGCCGGAGGAAGCAGTAGAATAACTTAGGACAGGAGGGGTGGGGA  932

seq1  CTCTTCTTTCCTATTTTTACTAAGGACTAAAAGAGTTGCTCATTACGGTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTTTCCTATTTTTACTAAGGACTAAAAGAGTTGCTCATTACGGTT  982

seq1  GCTGTGTGGAAGGCATCCCAGATTCCTAGGCCACTGGGTGTGTGTCTATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTGGAAGGCATCCCAGATTCCTAGGCCACTGGGTGTGTGTCTATT  1032

seq1  TTCAAGCCCCTGATATTTGCAATGACACAGTCTTTTAAACATCCAGGAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCCCCTGATATTTGCAATGACACAGTCTTTTAAACATCCAGGAAA  1082

seq1  CAGTTCCGAATCAGGTTAAAAATACCAACGAAGAATACAGAAATAAAATC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCGAATCAGGTTAAAAATACCAACGAAGAATACAGAAATAAAATC  1132

seq1  CTAAATAAAAGATACGCAAATGGAATTC  1178
      ||||||||||||||||||||||||||||
seq2  CTAAATAAAAGATACGCAAATGGAATTC  1160