BAC Information

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BAC

Clone NameB6Ng01-034L11
Chromosome15 (Build37)
Map Location 95,061,189 - 95,197,598
singlet/doubletdoublet
Overlap geneNell2
Upstream geneD630010B17Rik, Adamts20, Pus7l, Irak4, Twf1, Tmem117, LOC100043315
Downstream geneDbx2, LOC100042684, LOC667849, EG629300, LOC667864, Tmem16f, LOC100043329, D030018L15Rik, LOC100043335, EG667869, LOC667874, LOC667894, Arid2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034L11.bB6Ng01-034L11.g
ACCDH863387DH863388
length856782
definitionDH863387|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L11, 5' end.DH863388|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,196,731 - 95,197,598)(95,061,189 - 95,061,972)
sequence
gaattccctttctcctcctctattttctttctctcaattcattgtttcct
tccttctttccatcattccttcctttccttgtcccctcttcctcctttct
taacttttcccctcccttttccttcctcccccttccttactttccctcca
ctcctgtcctcccttttcccttccttcctcccctctctctcccctttgtc
ttcagctagctggcatctcacagctcactctctcagccatgacttcctga
ctcagatgatatcagcacatcattaggtatggaatgttgaggcttctgag
ttgattcctctaagaataaacagagtgagggccctgaagagtttctttac
caggacagggaggaaaatatggaatgagtagaaatctttgattgtaaatg
aagcccaagagcccttactggaactaatgagaggcctcctaatacagccg
ggatgaatggcccagagaacgaagccctgtgggattaattagggaagcct
aacagatatggcagctttcaaagatatggctaatgatgcactttctgtgg
tatgttaggataacatttcttttaaagagagagagagagagagagagaga
gagagagagagagagagagagagagaaaggaaaaccatgcaagaatgtcg
tacagtcaagatcttgcagattaaagatgcggcgtgatttactgtaagga
attaactggtgggctgttgaagtggacaagtcctgggtgtgcgatggtaa
ggtccagcagaggaaagctgcagagctgcgatactacagtggaatccgag
tcaaagcgagacccaaaagcctgcttagaccattctcctaaaacaagaga
aacatc
gaattcttagggattggtaacagatgtactgggggaagactgactgtttt
ccatgagtgcatagttcacctttaagcataggatggatggaataaaggca
cgggaggctttccttagctcaggctaaaggaggacttcaaggggtctccc
tctcagagaaggcgtacagaatgtcggccagtccagccctccagagcagg
ggccttcctagagctgagatccttgagtacagttcctcgtgttgtggcga
ccaccaatcataaaattcattcattgctacttcacaactgtaattttgtt
gccgttatgaatcataatgtaagtgtttgatatgcaggatctctgatatg
tgactctataaatgagttgtttaacctgatgggggtcatgacccacaggt
tgagaaccatggctccagagcctgcctttgggtttctctctccatcgtcc
tatccaggctctgtgcttgtaactgtcaacactcacgccagctgcttgct
gctggtgggtggaaggggatgctttcctgtgtaacttaccaagcagcggc
actgacggcaatcctggacccaggtgtcgccgctgttgtacacggtttcc
ccgttttgatgcaggcactgactgctcagccttgggtcacactcagggca
gcaggaaaggtcaactgtggggttttcgcagtcgcagaccatccgtcgac
acatgacaaacccagtctgtgttaaaagaggaacagtgtgttaccatgac
cctcgattctcagagtatgtgtgtatgatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_95196731_95197598
seq2: B6Ng01-034L11.b_49_900 (reverse)

seq1  TTTCTCTTGTTCTTAGGGAGATGGGTCTAAGGCAGGCTCTTTGGGTTCTC  50
      ||||||||||| ||| |||||  ||||||| ||||||| ||||||   ||
seq2  TTTCTCTTGTT-TTA-GGAGAATGGTCTAA-GCAGGCT-TTTGGG---TC  43

seq1  TGGCTTTGGACTCGGATTACAACTGTAGTATCCGCAGCTCTGGCAGCTTT  100
      | ||||| |||||||||| | |||||||||| ||||||||| ||||||||
seq2  TCGCTTT-GACTCGGATT-CCACTGTAGTAT-CGCAGCTCT-GCAGCTTT  89

seq1  CCTCTGCCTGGACCTTACCAACCGCACACCCCAGGACTTGTCCACTTCAA  150
      |||||| |||||||||||| | |||||| |||||||||||||||||||||
seq2  CCTCTG-CTGGACCTTACC-ATCGCACA-CCCAGGACTTGTCCACTTCAA  136

seq1  CAGCCCCACCAGTTAATTCCTTACAGTAAATCACGCCGCATCTTTTATCT  200
      ||| ||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAG-CCCACCAGTTAATTCCTTACAGTAAATCACGCCGCATCTTTAATCT  185

seq1  GCAAGATCTTGACTGTACGACATTCTTGCATGGTTTTTCTTTTCTCTCTC  250
      ||||||||||||||||||||||||||||||||| ||||| ||||||||||
seq2  GCAAGATCTTGACTGTACGACATTCTTGCATGG-TTTTCCTTTCTCTCTC  234

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTAAAAG  284

seq1  AAATGTTATCCTAACATACCACAGAAAGTGCATCATTAGCCATATCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTATCCTAACATACCACAGAAAGTGCATCATTAGCCATATCTTTG  334

seq1  AAAGCTGCCATATCTGTTAGGCTTCCCTAATTAATCCCACAGGGCTTCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGCCATATCTGTTAGGCTTCCCTAATTAATCCCACAGGGCTTCGT  384

seq1  TCTCTGGGCCATTCATCCCGGCTGTATTAGGAGGCCTCTCATTAGTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGGCCATTCATCCCGGCTGTATTAGGAGGCCTCTCATTAGTTCCA  434

seq1  GTAAGGGCTCTTGGGCTTCATTTACAATCAAAGATTTCTACTCATTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGGCTCTTGGGCTTCATTTACAATCAAAGATTTCTACTCATTCCAT  484

seq1  ATTTTCCTCCCTGTCCTGGTAAAGAAACTCTTCAGGGCCCTCACTCTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTCCCTGTCCTGGTAAAGAAACTCTTCAGGGCCCTCACTCTGTT  534

seq1  TATTCTTAGAGGAATCAACTCAGAAGCCTCAACATTCCATACCTAATGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTAGAGGAATCAACTCAGAAGCCTCAACATTCCATACCTAATGAT  584

seq1  GTGCTGATATCATCTGAGTCAGGAAGTCATGGCTGAGAGAGTGAGCTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGATATCATCTGAGTCAGGAAGTCATGGCTGAGAGAGTGAGCTGTG  634

seq1  AGATGCCAGCTAGCTGAAGACAAAGGGGAGAGAGAGGGGAGGAAGGAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCAGCTAGCTGAAGACAAAGGGGAGAGAGAGGGGAGGAAGGAAGG  684

seq1  GAAAAGGGAGGACAGGAGTGGAGGGAAAGTAAGGAAGGGGGAGGAAGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGGAGGACAGGAGTGGAGGGAAAGTAAGGAAGGGGGAGGAAGGAA  734

seq1  AAGGGAGGGGAAAAGTTAAGAAAGGAGGAAGAGGGGACAAGGAAAGGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGGGAAAAGTTAAGAAAGGAGGAAGAGGGGACAAGGAAAGGAAG  784

seq1  GAATGATGGAAAGAAGGAAGGAAACAATGAATTGAGAGAAAGAAAATAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATGGAAAGAAGGAAGGAAACAATGAATTGAGAGAAAGAAAATAGA  834

seq1  GGAGGAGAAAGGGAATTC  868
      ||||||||||||||||||
seq2  GGAGGAGAAAGGGAATTC  852

seq1: chr15_95061189_95061972
seq2: B6Ng01-034L11.g_71_852

seq1  GAATTCTTAGGGATTGGTAACAGATGTACTGGGGGAAGACTGACTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGGATTGGTAACAGATGTACTGGGGGAAGACTGACTGTTTT  50

seq1  CCATGAGTGCATAGTTCACCTTTAAGCATAGGATGGATGGAATAAAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGTGCATAGTTCACCTTTAAGCATAGGATGGATGGAATAAAGGCA  100

seq1  CGGGAGGCTTTCCTTAGCTCAGGCTAAAGGAGGACTTCAAGGGGTCTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGGCTTTCCTTAGCTCAGGCTAAAGGAGGACTTCAAGGGGTCTCCC  150

seq1  TCTCAGAGAAGGCGTACAGAATGTCGGCCAGTCCAGCCCTCCAGAGCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAGAAGGCGTACAGAATGTCGGCCAGTCCAGCCCTCCAGAGCAGG  200

seq1  GGCCTTCCTAGAGCTGAGATCCTTGAGTACAGTTCCTCGTGTTGTGGCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCCTAGAGCTGAGATCCTTGAGTACAGTTCCTCGTGTTGTGGCGA  250

seq1  CCACCAATCATAAAATTCATTCATTGCTACTTCACAACTGTAATTTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAATCATAAAATTCATTCATTGCTACTTCACAACTGTAATTTTGTT  300

seq1  GCCGTTATGAATCATAATGTAAGTGTTTGATATGCAGGATCTCTGATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTTATGAATCATAATGTAAGTGTTTGATATGCAGGATCTCTGATATG  350

seq1  TGACTCTATAAATGAGTTGTTTAACCTGATGGGGGTCATGACCCACAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTATAAATGAGTTGTTTAACCTGATGGGGGTCATGACCCACAGGT  400

seq1  TGAGAACCATGGCTCCAGAGCCTGCCTTTGGGTTTCTCTCTCCATCGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACCATGGCTCCAGAGCCTGCCTTTGGGTTTCTCTCTCCATCGTCC  450

seq1  TATCCAGGCTCTGTGCTTGTAACTGTCAACACTCACGCCAGCTGCTTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGGCTCTGTGCTTGTAACTGTCAACACTCACGCCAGCTGCTTGCT  500

seq1  GCTGGTGGGTGGAAGGGGATGCTTTCCTGTGTAACTTACCAAGCAGCGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGGGTGGAAGGGGATGCTTTCCTGTGTAACTTACCAAGCAGCGGC  550

seq1  ACTGACGGCAATCCTGGACCCAGGTGTCGCCGCTGTTGTACACGGTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACGGCAATCCTGGACCCAGGTGTCGCCGCTGTTGTACACGGTTTCC  600

seq1  CCGTTTTGATGCAGGCACTGACTGCTCAGCCTTGGGTCACACTCAGGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTTTGATGCAGGCACTGACTGCTCAGCCTTGGGTCACACTCAGGGCA  650

seq1  GCAGGAAAGGTCAACTGTGGGGTTTTCGCAGTCGCAGACCATCCGTCGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAAGGTCAACTGTGGGGTTTTCGCAGTCGCAGACCATCCGTCGAC  700

seq1  ACATGACAAACCCAGTCTGTGTTAAAAGAGGAACAGTGTGTTACCATGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGACAAACCCAGTCTGTGTTAAAAGAGGAACAGTGTGTTACCATGAC  750

seq1  CCTCGATTTCTCAGAGTATGTGTGTATGTATATG  784
      |||||| ||||||||||||||||||||| |||||
seq2  CCTCGA-TTCTCAGAGTATGTGTGTATG-ATATG  782