BAC Information

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BAC

Clone NameB6Ng01-035B05
Chromosome15 (Build37)
Map Location 7,840,034 - 7,975,284
singlet/doubletdoublet
Overlap geneWdr70, LOC665556, LOC621001
Upstream geneLifr, Egflam, Gdnf
Downstream geneNup155, 2410089E03Rik, LOC100039599, Nipbl, EG666437, LOC100039560, LOC100039633, Slc1a3, EG622770, LOC268781, LOC382969, LOC100039619
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035B05.bB6Ng01-035B05.g
ACCDH863643DH863644
length940702
definitionDH863643|Mus musculus domesticus DNA, BAC clone: B6Ng01-035B05, 5' end.DH863644|Mus musculus domesticus DNA, BAC clone: B6Ng01-035B05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,974,336 - 7,975,284)(7,840,034 - 7,840,738)
sequence
gaattctaaaacattaaaaatccaaatagttcttagatagattatatgtt
tggtaagttttttcttattcatttaattcatgatttatgttttcagttat
ttcagttctttctttagtgtgtattgtctgaatttccggaagccaccagg
gaagaaacaaatagaagtgcagtgataggcaacttgtggaaatgttagga
aggtttaataggatgagttggaaacaataaaatatacagtacctcaccat
gttgcctagtttttaagccttgaaagggatgaacatggatttgattattc
gcattttaaatgaattaatatgcaaaagaggtggtaaaaacaaacactaa
aagggctcgtgtgtgccagctgatgccagtgcagagaagcactggcccgg
ggctgatgctgcagatgagaacctctctcctcccctaatgctctcacgtc
tttcccacctccatacctttccaacttgtgtgggctgtctttctcagaaa
acaaacaaaccaaacaaaacaagaaaaaaaaaaaaagcaaaagcaaaagc
aaaccaataaaacaaacccaacaaaagcatgtagaaaaaatcttgagtct
gttttgttttgacctactagtaatggtcctggggccctgccctagagtgt
ggttgatatagccagttcactcccattggagaaaactgattttcccgttc
tcagcaggtatccagttgcagtagctttttggttatggtgggactttgtg
tcccttttgctttcttggtgctgggatcttatctgggttgactttatttg
gggaattactcccatctttataggtgatttatatgggtacccatcctgcg
ggtctgaaagacagtgtttcttggagttcccatcactggtcctcacagtc
ttcctgtctctcttgtttagatcctgagcctgaatgaggg
gaattcatcgttgactaacagcccacttcctgcacgcatgcacacggact
aaagggaaagagggacaactgacatctgaggtcctcgagagaagatcaaa
gcactgcagccctgtctgctgcaccgcagccctgtctcctgcactgcagc
cctgtctccgcaggctggccttctttagcccttgcctctaacatcccgct
cttccattaagaaggaagacctgcaaactctgaaatccctttggtagaaa
ctctactctcacctgactggtgatgcttaaatggctgcaaacccttttct
gatactccagaactatggagaaagctacaaagagcctgcaagttgctaat
tcacatccaacaatactccaaggtggtttgtaagctgtgtgccactgaag
tgggctgagtcattccagagtcagtgttggcatcctcctgccccgccccg
tggaggtgaaggtgggggtggggcgggctgaaagaacaggtctccacatt
tccttagcttttcctcaaatctggggcgctgctctccaatgtcagctagc
aagcaagtgttaaaaagcaaatcaaacaacagtgacagtaggacacactt
gccccatttgaaccactggagtcctttacccttgatggctcagttttctt
cctaatgtctctctctacatgcatttggtagtatgaggaggtagtatgtg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_7974336_7975284
seq2: B6Ng01-035B05.b_42_981 (reverse)

seq1  CCCTCCATTCAAGGCTCAGGGATCTATATACAAGAGAAGACAGGAAGACT  50
      |||| ||||| ||||||| |||||  || ||||||| |||||||||||||
seq2  CCCT-CATTC-AGGCTCA-GGATC--TAAACAAGAG-AGACAGGAAGACT  44

seq1  GTGAGAGCCAGTGATGGTGAACTCCAAGGAAACACTGTCTTTCAGACACA  100
      |||||  |||||||||| ||||||||| ||||||||||||||||||| | 
seq2  GTGAGGACCAGTGATGG-GAACTCCAA-GAAACACTGTCTTTCAGAC-CC  91

seq1  GCAGGATGGGTACACATATAAATTCACATATAAAGATTGTGAGTTAATGC  150
      ||||||||||||| |||||||| |||| |||||||| || ||| |||| |
seq2  GCAGGATGGGTACCCATATAAA-TCACCTATAAAGA-TGGGAG-TAATTC  138

seq1  CCCATATAAAGTCAACCCAGATAAGATCCCAGCACCAAGAAGGCAAAAGG  200
      |||| |||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCCAAATAAAGTCAACCCAGATAAGATCCCAGCACCAAGAAAGCAAAAGG  188

seq1  GACACAAAGTCCCACCATAACCAAAAAGCTACTTGCAACT-GATACCTGC  249
      |||||||||||||||||||||||||||||||| ||||||| |||||||||
seq2  GACACAAAGTCCCACCATAACCAAAAAGCTAC-TGCAACTGGATACCTGC  237

seq1  TGAGAACGGG-AAATCAGTTTTCTCCAAT-GGAGTGAACTGGCTATATCA  297
      |||||||||| |||||||||||||||||| ||||||||||||||||||||
seq2  TGAGAACGGGAAAATCAGTTTTCTCCAATGGGAGTGAACTGGCTATATCA  287

seq1  ACCACACTCTAGGGCA-GGCCCCAGGACCATTACTAGTAGGTCAAAACAA  346
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACCACACTCTAGGGCAGGGCCCCAGGACCATTACTAGTAGGTCAAAACAA  337

seq1  AACAGACTCAAGATTTTTTCTACATGCTTTTGTTGGGTTTGTTTTATTGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACTCAAGATTTTTTCTACATGCTTTTGTTGGGTTTGTTTTATTGG  387

seq1  TTTGCTTTTGCTTTTGCTTTTTTTTTTTTTCTTGTTTTGTTTGGTTTGTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTTGCTTTTGCTTTTTTTTTTTTTCTTGTTTTGTTTGGTTTGTT  437

seq1  TGTTTTCTGAGAAAGACAGCCCACACAAGTTGGAAAGGTATGGAGGTGGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTGAGAAAGACAGCCCACACAAGTTGGAAAGGTATGGAGGTGGG  487

seq1  AAAGACGTGAGAGCATTAGGGGAGGAGAGAGGTTCTCATCTGCAGCATCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACGTGAGAGCATTAGGGGAGGAGAGAGGTTCTCATCTGCAGCATCA  537

seq1  GCCCCGGGCCAGTGCTTCTCTGCACTGGCATCAGCTGGCACACACGAGCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCGGGCCAGTGCTTCTCTGCACTGGCATCAGCTGGCACACACGAGCC  587

seq1  CTTTTAGTGTTTGTTTTTACCACCTCTTTTGCATATTAATTCATTTAAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGTGTTTGTTTTTACCACCTCTTTTGCATATTAATTCATTTAAAA  637

seq1  TGCGAATAATCAAATCCATGTTCATCCCTTTCAAGGCTTAAAAACTAGGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAATAATCAAATCCATGTTCATCCCTTTCAAGGCTTAAAAACTAGGC  687

seq1  AACATGGTGAGGTACTGTATATTTTATTGTTTCCAACTCATCCTATTAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGTGAGGTACTGTATATTTTATTGTTTCCAACTCATCCTATTAAA  737

seq1  CCTTCCTAACATTTCCACAAGTTGCCTATCACTGCACTTCTATTTGTTTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTAACATTTCCACAAGTTGCCTATCACTGCACTTCTATTTGTTTC  787

seq1  TTCCCTGGTGGCTTCCGGAAATTCAGACAATACACACTAAAGAAAGAACT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGGTGGCTTCCGGAAATTCAGACAATACACACTAAAGAAAGAACT  837

seq1  GAAATAACTGAAAACATAAATCATGAATTAAATGAATAAGAAAAAACTTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAACTGAAAACATAAATCATGAATTAAATGAATAAGAAAAAACTTA  887

seq1  CCAAACATATAATCTATCTAAGAACTATTTGGATTTTTAATGTTTTAGAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACATATAATCTATCTAAGAACTATTTGGATTTTTAATGTTTTAGAA  937

seq1  TTC  949
      |||
seq2  TTC  940

seq1: chr15_7840034_7840738
seq2: B6Ng01-035B05.g_66_767

seq1  GAATTCATCGTTGACTAACAGCCCACTTCCTGCACGCATGCACACGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCGTTGACTAACAGCCCACTTCCTGCACGCATGCACACGGACT  50

seq1  AAAGGGAAAGAGGGACAACTGACATCTGAGGTCCTCGAGAGAAGATCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAAAGAGGGACAACTGACATCTGAGGTCCTCGAGAGAAGATCAAA  100

seq1  GCACTGCAGCCCTGTCTGCTGCACCGCAGCCCTGTCTCCTGCACTGCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCAGCCCTGTCTGCTGCACCGCAGCCCTGTCTCCTGCACTGCAGC  150

seq1  CCTGTCTCCGCAGGCTGGCCTTCTTTAGCCCTTGCCTCTAACATCCCGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCCGCAGGCTGGCCTTCTTTAGCCCTTGCCTCTAACATCCCGCT  200

seq1  CTTCCATTAAGAAGGAAGACCTGCAAACTCTGAAATCCCTTTGGTAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATTAAGAAGGAAGACCTGCAAACTCTGAAATCCCTTTGGTAGAAA  250

seq1  CTCTACTCTCACCTGACTGGTGATGCTTAAATGGCTGCAAACCCTTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTCTCACCTGACTGGTGATGCTTAAATGGCTGCAAACCCTTTTCT  300

seq1  GATACTCCAGAACTATGGAGAAAGCTACAAAGAGCCTGCAAGTTGCTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCCAGAACTATGGAGAAAGCTACAAAGAGCCTGCAAGTTGCTAAT  350

seq1  TCACATCCAACAATACTCCAAGGTGGTTTGTAAGCTGTGTGCCACTGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCCAACAATACTCCAAGGTGGTTTGTAAGCTGTGTGCCACTGAAG  400

seq1  TGGGCTGAGTCATTCCAGAGTCAGTGTTGGCATCCTCCTGCCCCGCCCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGAGTCATTCCAGAGTCAGTGTTGGCATCCTCCTGCCCCGCCCCG  450

seq1  TGGAGGTGAAGGTGGGGGTGGGGCGGGCTGAAAGAACAGGTCTCCACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTGAAGGTGGGGGTGGGGCGGGCTGAAAGAACAGGTCTCCACATT  500

seq1  TCCTTAGC-TTTCCTCAAATCTGGGGCGCTGCTCTCCAATGTCGGCTAGC  549
      |||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  TCCTTAGCTTTTCCTCAAATCTGGGGCGCTGCTCTCCAATGTCAGCTAGC  550

seq1  AAGCAAGTGTTAAAAAGCAAATCAAACAACAGTGACAGTA-GACACACTT  598
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAGCAAGTGTTAAAAAGCAAATCAAACAACAGTGACAGTAGGACACACTT  600

seq1  GCCCCATTTGAACCACTGGAGTCCTTTACACTTGATGGCTCAGTTTTCCT  648
      ||||||||||||||||||||||||||||| ||||||||||||||||| ||
seq2  GCCCCATTTGAACCACTGGAGTCCTTTACCCTTGATGGCTCAGTTTT-CT  649

seq1  TCCTAATGTTCTCTCCTCTACATGCATTTGGTTAGTTATGAGGAGGGAGG  698
      |||||||| ||||| |||||||||||||||| ||| |||||||||| || 
seq2  TCCTAATG-TCTCT-CTCTACATGCATTTGG-TAG-TATGAGGAGGTAGT  695

seq1  ATGTGTG  705
      |||||||
seq2  ATGTGTG  702