BAC Information

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BAC

Clone NameB6Ng01-035E14
Chromosome15 (Build37)
Map Location 40,563,244 - 40,675,691
singlet/doubletdoublet
Overlap geneZfpm2
Upstream geneTm7sf4, Dpys, Lrp12, LOC100039130, LOC670013, LOC664872, Ppia-ps25
Downstream geneOxr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035E14.bB6Ng01-035E14.g
ACCDH863793DH863794
length915731
definitionDH863793|Mus musculus domesticus DNA, BAC clone: B6Ng01-035E14, 5' end.DH863794|Mus musculus domesticus DNA, BAC clone: B6Ng01-035E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,563,244 - 40,564,171)(40,674,976 - 40,675,691)
sequence
gaattctcttttctcattgaaaaggagattcctttcccctttcatggctc
tgtacagtctgtggctgaaaacaatgtaccaggagagaccatgttggtgc
attcctctttcaggaacaagtcacgtggttttgttcaccacagcaactct
gagccatgagaagatatgcagccaggcacatcatatcctcacaggccaaa
aatggggggtctgtcaacttatcattaggtctgataaccagaaatgagga
agctaagaataaacatttgaccaattctgtattttctctttcttaaaaat
tgaaatctagaagagaaaatgaagtcaaacacagcaaaaatataagccag
aaagtccatgcacttataatgctcgtgaactatacagagggctttcatca
ggggaataaattggtcttgcttgtggcaaacttgagtcatttgtttgttt
gttttttgttttttttttcaagacagggtttctctgtgtagctctggctc
tcctggaactcactctgtagaccaggctggccttgaactcagaaatcctc
ttgcctctacctcccgagtgctgggattaaaggcatggtgccacaatgcc
cggctgagtcttttgttttttaatgataaaaacttagtgctaactacttt
gaaggatgttattgggttttttaaaaaaatattatttaatataattgaca
tttctatcattgacttttcttcttttaaaaagcttccccaagactgcctt
gcactaatgatgagagtttgcagcttttgaaatcagtgatgtgtttatga
aacttctttctgacagcaaacataccaataaaactttgctcagcacagat
cttgtagtctccagaattctggaagagagctatgaattgaatatgacctt
tggacatttgagctt
gaattctgagaaagagagctaggtgtagagtcccttggaggatatttgga
cagtgacaacccatgaacatgtttaggctgcattcctttaaaataataag
tgcagtgcactgattaggaactgttatacttagtcctccaaattcaggtc
agcaatacacagggatcataacaagcaggcaaacacagttttagtaatac
gtgaggcaatacaaactcctgatgttaatacttgaactgatacaaacttc
acatactgaaatcccattagatatatttagagatatgcattttagatgat
ataacccttacttttttattatgatgacaaaatactgatagaagcaattt
gagagaagggagatttatcttgtcttccaatcctggggaacttagtccat
catcgcagggaagatacgctgaaaggcagatttccgcagaataaagtgat
tgctgtgcactcacagcatggtatgcaggaaagagcacaggttctcccag
aggtaggtgcaaccttcaaagtctacctccaataatctaccttactcatc
ctcacctattaattctcaagttcccaaatatctcacaagctttaaacctg
cttgtcagttaaagacaaagtatttaaacatggggggacctgtcagaaat
ttttactttcccaaagataggcagtaaaaaaaatggaggttttattggca
aatgctaatcaatatcacttttgtctttata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_40563244_40564171
seq2: B6Ng01-035E14.b_44_958

seq1  GAATTCTCTTTTCTCATTGAAAAGGAGATTCCTTTCCCCTTTCATGGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTCTCATTGAAAAGGAGATTCCTTTCCCCTTTCATGGCTC  50

seq1  TGTACAGTCTGTGGCTGAAAACAATGTACCAGGAGAGACCATGTTGGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGTCTGTGGCTGAAAACAATGTACCAGGAGAGACCATGTTGGTGC  100

seq1  ATTCCTCTTTCAGGAACAAGTCACGTGGTTTTGTTCACCACAGCAACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCTTTCAGGAACAAGTCACGTGGTTTTGTTCACCACAGCAACTCT  150

seq1  GAGCCATGAGAAGATATGCAGCCAGGCACATCATATCCTCACAGGCCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATGAGAAGATATGCAGCCAGGCACATCATATCCTCACAGGCCAAA  200

seq1  AATGGGGGGTCTGTCAACTTATCATTAGGTCTGATAACCAGAAATGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGGGTCTGTCAACTTATCATTAGGTCTGATAACCAGAAATGAGGA  250

seq1  AGCTAAGAATAAACATTTGACCAATTCTGTATTTTCTCTTTCTTAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGAATAAACATTTGACCAATTCTGTATTTTCTCTTTCTTAAAAAT  300

seq1  TGAAATCTAGAAGAGAAAATGAAGTCAAACACAGCAAAAATATAAGCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCTAGAAGAGAAAATGAAGTCAAACACAGCAAAAATATAAGCCAG  350

seq1  AAAGTCCATGCACTTATAATGCTCGTGAACTATACAGAGGGCTTTCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCATGCACTTATAATGCTCGTGAACTATACAGAGGGCTTTCATCA  400

seq1  GGGGAATAAATTGGTCTTGCTTGTGGCAAACTTGAGTCATTTGTTTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATAAATTGGTCTTGCTTGTGGCAAACTTGAGTCATTTGTTTGTTT  450

seq1  GTTTTTTGTTTTTTTTTTCAAGACAGGGTTTCTCTGTGTAGCTCTGGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGTTTTTTTTTTCAAGACAGGGTTTCTCTGTGTAGCTCTGGCTC  500

seq1  TCCTGGAACTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCTC  550

seq1  TTGCCTCTACCTCCCGAGTGCTGGGATTAAAGGCAT-GTGCCACAATGCC  599
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGCCTCTACCTCCCGAGTGCTGGGATTAAAGGCATGGTGCCACAATGCC  600

seq1  CGGCTGAGTCTTTTGTTTTTTAATGAT-AAAACTTAGTGCTAACTACTT-  647
      ||||||||||||||||||||||||||| ||||||||||||||||||||| 
seq2  CGGCTGAGTCTTTTGTTTTTTAATGATAAAAACTTAGTGCTAACTACTTT  650

seq1  -GAGGATGTTATTGGGTTTTTTAAAAAAATATTATTTAATATATTGAACA  696
        ||||||||||||||||||||||||||||||||||||||||| |  |||
seq2  GAAGGATGTTATTGGGTTTTTTAAAAAAATATTATTTAATATAATTGACA  700

seq1  TTTCTATCATTGAC-TTTCTTCTTTTAAAAAGCTTCCCCAAAGACTGCCT  745
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  TTTCTATCATTGACTTTTCTTCTTTTAAAAAGCTTCCCC-AAGACTGCCT  749

seq1  TGCACTAATGATGAGAGTTTGCAGCTTTTGAAATCAGTGATGGTGTTTAT  795
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGCACTAATGATGAGAGTTTGCAGCTTTTGAAATCAGTGAT-GTGTTTAT  798

seq1  GAAACTTCTTTCTGACAGCAAACATACCATAAAAACTTTGCTCAGCACAG  845
      |||||||||||||||||||||||||||||  |||||||||||||||||||
seq2  GAAACTTCTTTCTGACAGCAAACATACCAATAAAACTTTGCTCAGCACAG  848

seq1  ATCTTTGTAGTCCTCCAAGAATTTCTTGGAAGAGGAAGACTATGAATTTG  895
      ||| ||||||| |||| ||||||   ||||||||  || ||||||| |||
seq2  ATC-TTGTAGT-CTCC-AGAATT--CTGGAAGAG--AG-CTATGAA-TTG  889

seq1  AATTAATGACTCTTTTGGACAATTTTGAAGCTT  928
      |||  ||||  | ||||||||  |||| |||||
seq2  AAT--ATGA--CCTTTGGACA--TTTG-AGCTT  915

seq1: chr15_40674976_40675691
seq2: B6Ng01-035E14.g_69_782 (reverse)

seq1  TATTGGATTAGCATTTGCCAATAAAACCTCATTTTATCTTAACTGCCTAT  50
      |||| |||||||||||||||||||||||||  ||| | || |||||||||
seq2  TATT-GATTAGCATTTGCCAATAAAACCTCCATTT-TTTTTACTGCCTAT  48

seq1  CTTTGGGGAATGTAAAAATTTCTGACATGGTCCCCCATGTTTAAATACTT  100
      |||| ||||| |||||||||||||||| |  |||||||||||||||||||
seq2  CTTT-GGGAAAGTAAAAATTTCTGACAGGTCCCCCCATGTTTAAATACTT  97

seq1  TGTCTTTAACTGAC-AGCAGGTTTTAAAGCTTGTGAGATATTT-GGAACT  148
      |||||||||||||| |||||| ||||||||||||||||||||| ||||||
seq2  TGTCTTTAACTGACAAGCAGG-TTTAAAGCTTGTGAGATATTTGGGAACT  146

seq1  TGAGAATTAATAGGTGAGGATGAGTAAGGTAGATTATTGGAGGTAGACTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATTAATAGGTGAGGATGAGTAAGGTAGATTATTGGAGGTAGACTT  196

seq1  TGAAGGTTGCACCTACCTCTGGGAGAACCTGTGCTCTTTCCTGCATACCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTTGCACCTACCTCTGGGAGAACCTGTGCTCTTTCCTGCATACCA  246

seq1  TGCTGTGAGTGCACAGCAATCACTTTATTCTGCGGAAATCTGCCTTTCAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGAGTGCACAGCAATCACTTTATTCTGCGGAAATCTGCCTTTCAG  296

seq1  CGTATCTTCCCTGCGATGATGGACTAAGTTCCCCAGGATTGGAAGACAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATCTTCCCTGCGATGATGGACTAAGTTCCCCAGGATTGGAAGACAAG  346

seq1  ATAAATCTCCCTTCTCTCAAATTGCTTCTATCAGTATTTTGTCATCATAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTCCCTTCTCTCAAATTGCTTCTATCAGTATTTTGTCATCATAA  396

seq1  TAAAAAAGTAAGGGTTATATCATCTAAAATGCATATCTCTAAATATATCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGTAAGGGTTATATCATCTAAAATGCATATCTCTAAATATATCT  446

seq1  AATGGGATTTCAGTATGTGAAGTTTGTATCAGTTCAAGTATTAACATCAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGATTTCAGTATGTGAAGTTTGTATCAGTTCAAGTATTAACATCAG  496

seq1  GAGTTTGTATTGCCTCACGTATTACTAAAACTGTGTTTGCCTGCTTGTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGTATTGCCTCACGTATTACTAAAACTGTGTTTGCCTGCTTGTTA  546

seq1  TGATCCCTGTGTATTGCTGACCTGAATTTGGAGGACTAAGTATAACAGTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCTGTGTATTGCTGACCTGAATTTGGAGGACTAAGTATAACAGTT  596

seq1  CCTAATCAGTGCACTGCACTTATTATTTTAAAGGAATGCAGCCTAAACAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATCAGTGCACTGCACTTATTATTTTAAAGGAATGCAGCCTAAACAT  646

seq1  GTTCATGGGTTGTCACTGTCCAAATATCCTCCAAGGGACTCTACACCTAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATGGGTTGTCACTGTCCAAATATCCTCCAAGGGACTCTACACCTAG  696

seq1  CTCTCTTTCTCAGAATTC  716
      ||||||||||||||||||
seq2  CTCTCTTTCTCAGAATTC  714