BAC Information

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BAC

Clone NameB6Ng01-037H07
Chromosome15 (Build37)
Map Location 84,699,083 - 84,865,393
singlet/doubletdoublet
Overlap gene4930513L16Rik, Nup50, 5031439G07Rik, LOC628135, Upk3a
Upstream gene4931407K02Rik, LOC667167, Sult4a1, Pnpla5, Pnpla3, Samm50, Parvb, Parvg, LOC382988, 1810041L15Rik, Ldoc1l, Arhgap8, 3110043J09Rik, Phf21b, LOC100043084
Downstream gene3110048E14Rik, Smc1b, Ribc2, Fbln1, Atxn10, EG223745, Wnt7b, LOC100042240, Ppara, 2210021J22Rik, Pkdrej, AW124722, Gtse1, Trmu, Celsr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037H07.bB6Ng01-037H07.g
ACCDH865311DH865312
length636782
definitionDH865311|Mus musculus domesticus DNA, BAC clone: B6Ng01-037H07, 5' end.DH865312|Mus musculus domesticus DNA, BAC clone: B6Ng01-037H07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,864,758 - 84,865,393)(84,699,083 - 84,699,864)
sequence
gaattccagaagctccaaagccagcgagtctggctcatgacattgtgaac
aacataagacggaccctgacccaaacccacagagaagtttgtcctcagat
ctccacagtaatgccatggatacacacacacacacacacacacacacaca
cacacacacagggacttaactggtcagtcaagctgcttcagtgtgctgct
gtctggtttgctacagaaagaactttgcacaaccagaaaggaaagaactg
ccagactcagtgagaaatgctagggtggtagaaaagacacaacaggtgtc
ccacgacaacatattgtcaccccctcacacccacacacgcccaccagaga
tgaagctaatgctttatttatttatttatttatttttggtttttcgagac
agggtttctctgtatagctctggctgtcctggaactcactttgtagacca
ggctggctttgaactcagaaatctgcctgcctctgcctcccaagtgctgg
gattaaaggcctgtgtttcgttcagccagtggctcacatgcctaggttct
agtctggaaaggcatcttggaaacctggaagagaagaggggggctaggcg
gcatgtatgcgcgcgcatgcgggggggggggggacc
gaattccaggacagccagggctatacagagaaaccctgtctcgaaaaaaa
caaaaacaaaaacaaaaaaagaaaaaagaaagaaagaaagaaagaaagaa
ggaaagaaaaaaaaagggacagatcatagtaactaacccacttatatgtt
tgtttcatgggggaagctacaggtgcaactaacatcaactgcttgatgtt
agccccaactattgcattaagttcgtgtccatactggaaacctcaatgac
ttgcctctagagtcttcatggtcccttctctttctaccctagcaacatgt
ttcttcaaagctctacacttgctgatggaccaggggaagggggcattgca
caggattatcattcaattcaaccagggagtatctgactgttgtagaatct
ctgtcccaacacagtgagtaaagcccagggggaattatgtccagactagc
cttgcgcactcttgagcccattgattccccaccatccctgttgctaaaat
tccttcccacggagagaaataagcagtgtctacccccttcgcccatggtc
tcaactacaaaggcaagcctgtgaacatggctgtatttggaaaatggtac
atctcctgagaaagataaagatggagagaggagatcaagctgggtcacct
ggatgagacacctggatggtcaccggtgtcagaggagggcagtttccaag
gagaaaaggcatggaggctgagtgaaaatggaggcagaggtggtattgaa
gtggccacaggcctcaggacccttgagctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_84864758_84865393
seq2: B6Ng01-037H07.b_46_681 (reverse)

seq1  GGTCCCCCCCCCCCCCGCATGCGCGCGCATACATGCCGCCTAGCCCCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCCCCCCCCCCCGCATGCGCGCGCATACATGCCGCCTAGCCCCCCT  50

seq1  CTTCTCTTCCAGGTTTCCAAGATGCCTTTCCAGACTAGAACCTAGGCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTTCCAGGTTTCCAAGATGCCTTTCCAGACTAGAACCTAGGCATG  100

seq1  TGAGCCACTGGCTGAACGAAACACAGGCCTTTAATCCCAGCACTTGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCACTGGCTGAACGAAACACAGGCCTTTAATCCCAGCACTTGGGAG  150

seq1  GCAGAGGCAGGCAGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCAGGCAGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAAAGTG  200

seq1  AGTTCCAGGACAGCCAGAGCTATACAGAGAAACCCTGTCTCGAAAAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGGACAGCCAGAGCTATACAGAGAAACCCTGTCTCGAAAAACCA  250

seq1  AAAATAAATAAATAAATAAATAAAGCATTAGCTTCATCTCTGGTGGGCGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATAAATAAATAAATAAAGCATTAGCTTCATCTCTGGTGGGCGT  300

seq1  GTGTGGGTGTGAGGGGGTGACAATATGTTGTCGTGGGACACCTGTTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGTGTGAGGGGGTGACAATATGTTGTCGTGGGACACCTGTTGTGT  350

seq1  CTTTTCTACCACCCTAGCATTTCTCACTGAGTCTGGCAGTTCTTTCCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTACCACCCTAGCATTTCTCACTGAGTCTGGCAGTTCTTTCCTTT  400

seq1  CTGGTTGTGCAAAGTTCTTTCTGTAGCAAACCAGACAGCAGCACACTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTGTGCAAAGTTCTTTCTGTAGCAAACCAGACAGCAGCACACTGAA  450

seq1  GCAGCTTGACTGACCAGTTAAGTCCCTGTGTGTGTGTGTGTGTGTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTGACTGACCAGTTAAGTCCCTGTGTGTGTGTGTGTGTGTGTGTG  500

seq1  TGTGTGTGTGTGTGTATCCATGGCATTACTGTGGAGATCTGAGGACAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTATCCATGGCATTACTGTGGAGATCTGAGGACAAAC  550

seq1  TTCTCTGTGGGTTTGGGTCAGGGTCCGTCTTATGTTGTTCACAATGTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTGGGTTTGGGTCAGGGTCCGTCTTATGTTGTTCACAATGTCAT  600

seq1  GAGCCAGACTCGCTGGCTTTGGAGCTTCTGGAATTC  636
      ||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGACTCGCTGGCTTTGGAGCTTCTGGAATTC  636

seq1: chr15_84699083_84699864
seq2: B6Ng01-037H07.g_71_852

seq1  GAATTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAAAA  50

seq1  CAAAAACAAAAACAAAAAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAAAAACAAAAAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAA  100

seq1  GGAAAGAAAAAAAAAGGGACAGATCATAGTAACTAACCCACTTATATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAAAAAAAAAGGGACAGATCATAGTAACTAACCCACTTATATGTT  150

seq1  TGTTTCATGGGGGAAGCTACAGGTGCAACTAACATCAACTGCTTGATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCATGGGGGAAGCTACAGGTGCAACTAACATCAACTGCTTGATGTT  200

seq1  AGCCCCAACTATTGCATTAAGTTCGTGTCCATACTGGAAACCTCAATGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCAACTATTGCATTAAGTTCGTGTCCATACTGGAAACCTCAATGAC  250

seq1  TTGCCTCTAGAGTCTTCATGGTCCCTTCTCTTTCTACCCTAGCAACATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTAGAGTCTTCATGGTCCCTTCTCTTTCTACCCTAGCAACATGT  300

seq1  TTCTTCAAAGCTCTACACTTGCTGATGGACCAGGGGAAGGGGGCATTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAAAGCTCTACACTTGCTGATGGACCAGGGGAAGGGGGCATTGCA  350

seq1  CAGGATTATCATTCAATTCAACCAGGGAGTATCTGACTGTTGTAGAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTATCATTCAATTCAACCAGGGAGTATCTGACTGTTGTAGAATCT  400

seq1  CTGTCCCAACACAGTGAGTAAAGCCCAGGGGGAATTATGTCCAGACTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCAACACAGTGAGTAAAGCCCAGGGGGAATTATGTCCAGACTAGC  450

seq1  CTTGCGCACTCTTGAGCCCATTGATTCCCCACCATCCCTGTTGCTAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCGCACTCTTGAGCCCATTGATTCCCCACCATCCCTGTTGCTAAAAT  500

seq1  TCCTTCCCACGGAGAGAAATAAGCAGTGTCTACCCCCTTCGCCCATGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCCACGGAGAGAAATAAGCAGTGTCTACCCCCTTCGCCCATGGTC  550

seq1  TCAACTACAAAGGCAAGCCTGTGAACATGGCTGTATTTGGAAAATGGTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTACAAAGGCAAGCCTGTGAACATGGCTGTATTTGGAAAATGGTAC  600

seq1  ATCTCCTGAGAAAGATAAAGATGGAGAGAGGAGATCAAGCTGGGTCACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTGAGAAAGATAAAGATGGAGAGAGGAGATCAAGCTGGGTCACCT  650

seq1  GGATGAGACACCTGGATGGTCACCGGTGTCAGAGGAGGGCAG-TTCCAAG  699
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGATGAGACACCTGGATGGTCACCGGTGTCAGAGGAGGGCAGTTTCCAAG  700

seq1  GAGAAAAGGCATGGAGGCTGAGTGAAAATGGAGGCAGAGGTGGTAGTGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAGAAAAGGCATGGAGGCTGAGTGAAAATGGAGGCAGAGGTGGTATTGAA  750

seq1  GTGGCCACAGGCCACAGGACACCTTGAGCTGCT  782
      ||||||||||||| |||||| ||||||||||||
seq2  GTGGCCACAGGCCTCAGGAC-CCTTGAGCTGCT  782