BAC Information

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BAC

Clone NameB6Ng01-041L13
Chromosome15 (Build37)
Map Location 71,258,513 - 71,259,442
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383051
Downstream gene1700010C24Rik, LOC100040847, Col22a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041L13.bB6Ng01-041L13.g
ACCDH868300DH868301
length926822
definitionDH868300|Mus musculus domesticus DNA, BAC clone: B6Ng01-041L13, 5' end.DH868301|Mus musculus domesticus DNA, BAC clone: B6Ng01-041L13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagagcaaagagggaatcactataataactgtgtgggccactat
ccatcatgtccagagaagaatccttctttcctctttcacccatggaagca
tttggactcctgaccaagaacatctcctttttaaaagccacatgggtgca
agtatcctcacaataccagagaccttttgctgtaatctctaaatgggaat
ttctaaatagaaatcacagacatttctaaaaagaaattacaaaaattaat
taaatcatttaagtcatctaagtcaatcaagacattgctatgctagcatt
ctttatttgaccactcccacaaaccatggctgtggaaggttttttgtttt
tgttgttttgttttgtttttgtttttgtttttgtttttgttttgttttgt
ttttccagtgagaatacttattttgtcaacttgacaaaatcaggaaaagg
gaatcttagttgaagatgtgctttcctttatcagatttgcctgtaggcct
gtgtgtgagacaatttcctggtcactgatgtaagaggacccgtcctatca
tgtgagatacggtgctttggctggtgagcatgagctgcataagaatggca
actaaatatgaacatggcagcaaaacagttagcagcattcctgcatggga
tctgatccaggttcctgccatgactccctttagttataaagtagtaccta
gaagtatggaagaaataaatccttctctcctcaaggaggttttttgtcct
catacgtatcatagaaacagacacctgattaggatcctgagtaggagaat
ccaggtactctcagatggctcagcagtacaagcattgcaagagacctggt
ggtgtatcaaagtaataaattctgcggacttcactgcctgctgcccttat
tcagatccttcctgtggactccagcc
gaattcactaaaaccatccaggatctaaaaatggaagtagaaaaaaataa
agaaatcacaaagagagacaactctagagatagaaaacctaggaaagaca
tcaggagccatagatgcaaggatcaccaatacaatacaagaaatagaaga
gacaatctcaagtgcagaagataccatagaaaacattgacatagaaattg
caaaatgggctaatatccacttatcagtgagtacatattgtgtgagttcc
tttgtgattgggttacttcaagatacaacttgccaaacgcatgaaattca
agaagaacgaagaccaaagtgtggacactttatttaccctttcttagaaa
tgggaacaaaatacccatggaaggagttacagagacaaaatttggagctg
tgacgaaaggatggaccatctagtgattgccatatgcagggatccatccc
ataatcagcttccaaatgctgacaccattgcatacactagcaagattttg
ctgaaaggacccagatatagctctctcttgtgagactatgctggggccta
gcaaacacagaagtggatgatcacagtcagctattggatgggtcacacgg
cccccaatggaggagctagagaaattacccaaggagctaaagggaactgc
aaccctataggtggaacaacaatatgaaactaaccagtacccgggagctc
ttgtctttagctgcatatgtatcaaaagatggcctagcggccatcacagc
aaatagaagcccattggactggcaaacgttttatgcccccagtccagggt
attgcttggtcataaaggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_71258513_71259442
seq2: B6Ng01-041L13.b_40_965 (reverse)

seq1  GGCTGGAAGTCAACAGGAAAGGATCTGAATAAAGGGCAGTCAGGTAGTGA  50
      |||||| |||| ||||| |||||||||||| |||||||| |||| |||||
seq2  GGCTGG-AGTCCACAGG-AAGGATCTGAAT-AAGGGCAG-CAGGCAGTGA  46

seq1  AGTCCG-AGAATTTATTTAATTTGATACACCAACAGGTTTCTTTCAATGC  99
      |||||| |||||||| ||| |||||||||||| ||||| |||| ||||||
seq2  AGTCCGCAGAATTTA-TTACTTTGATACACCACCAGGTCTCTTGCAATGC  95

seq1  TTTTACTGCTGAGCCATCTGAGAGTACCTGGATTCTCCTACTGAGGATCC  149
      || ||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTGTACTGCTGAGCCATCTGAGAGTACCTGGATTCTCCTACTCAGGATCC  145

seq1  TAATTAGGTGTCTGTTTCTATGATAAGTATGATGAC-AAAAACCTCCTTG  198
      |||| |||||||||||||||||||| |||||| ||| |||||||||||||
seq2  TAATCAGGTGTCTGTTTCTATGATACGTATGAGGACAAAAAACCTCCTTG  195

seq1  AGGAGAGAAGGATTTATTTCATCCTATACTTCTAGGTACTACTTTATAAC  248
      |||||||||||||||||||| ||| |||||||||||||||||||||||||
seq2  AGGAGAGAAGGATTTATTTCTTCC-ATACTTCTAGGTACTACTTTATAAC  244

seq1  TAAAGGGAGTCATGGCAGGAACCTGGATCAGATACCATGCAGGAATGCTG  298
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAAAGGGAGTCATGGCAGGAACCTGGATCAGATCCCATGCAGGAATGCTG  294

seq1  CTAACTGTTTTGCTGCCATGTTCATATTTAGTTGCCATTCTTATGCAGCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTGTTTTGCTGCCATGTTCATATTTAGTTGCCATTCTTATGCAGCT  344

seq1  CATGCTCACCAGCCAAAGCACCGTATCTCACATGATAGGACGGGTCCTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCACCAGCCAAAGCACCGTATCTCACATGATAGGACGGGTCCTCT  394

seq1  TACATCAGTGACCAGGAAATTGTCTCACACACAGGCCTACAGGCAAATCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCAGTGACCAGGAAATTGTCTCACACACAGGCCTACAGGCAAATCT  444

seq1  GATAAAGGAAAGCACATCTTCAACTAAGATTCCCTTTTCCTGATTTTGTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGGAAAGCACATCTTCAACTAAGATTCCCTTTTCCTGATTTTGTC  494

seq1  AAGTTGACAAAATAAGTATTCTCACTGGAAAAACAAAACAAAACAAAAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGACAAAATAAGTATTCTCACTGGAAAAACAAAACAAAACAAAAAC  544

seq1  AAAAACAAAAACAAAAACAAAACAAAACAACAAAAACAAAAAACCTTCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAAACAAAAACAAAACAAAACAACAAAAACAAAAAACCTTCCA  594

seq1  CAGCCATGGTTTGTGGGAGTGGTCAAATAAAGAATGCTAGCATAGCAATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATGGTTTGTGGGAGTGGTCAAATAAAGAATGCTAGCATAGCAATG  644

seq1  TCTTGATTGACTTAGATGACTTAAATGATTTAATTAATTTTTGTAATTTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATTGACTTAGATGACTTAAATGATTTAATTAATTTTTGTAATTTC  694

seq1  TTTTTAGAAATGTCTGTGATTTCTATTTAGAAATTCCCATTTAGAGATTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGAAATGTCTGTGATTTCTATTTAGAAATTCCCATTTAGAGATTA  744

seq1  CAGCAAAAGGTCTCTGGTATTGTGAGGATACTTGCACCCATGTGGCTTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAAGGTCTCTGGTATTGTGAGGATACTTGCACCCATGTGGCTTTT  794

seq1  AAAAAGGAGATGTTCTTGGTCAGGAGTCCAAATGCTTCCATGGGTGAAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAGATGTTCTTGGTCAGGAGTCCAAATGCTTCCATGGGTGAAAG  844

seq1  AGGAAAGAAGGATTCTTCTCTGGACATGATGGATAGTGGCCCACACAGTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAAGGATTCTTCTCTGGACATGATGGATAGTGGCCCACACAGTT  894

seq1  ATTATAGTGATTCCCTCTTTGCTCTGGAATTC  930
      ||||||||||||||||||||||||||||||||
seq2  ATTATAGTGATTCCCTCTTTGCTCTGGAATTC  926