BAC Information

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BAC

Clone NameB6Ng01-041P19
Chromosome15 (Build37)
Map Location 63,842,948 - 63,939,697
singlet/doubletdoublet
Overlap gene0910001A06Rik, Ddef1
Upstream geneEG239502, EG432959, LOC672194, Mlze, AI987692, Gsdmdc2, 9930109F21Rik, LOC665769, 9030605I04Rik, 4933426G20Rik
Downstream geneAdcy8, LOC268812
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041P19.bB6Ng01-041P19.g
ACCDH868491DH868492
length1,134416
definitionDH868491|Mus musculus domesticus DNA, BAC clone: B6Ng01-041P19, 5' end.DH868492|Mus musculus domesticus DNA, BAC clone: B6Ng01-041P19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,842,948 - 63,844,081)(63,939,276 - 63,939,697)
sequence
gaattccaaaattccacagctgagaaccaatgagagtgaatccaaggaga
ggaggtctaccaatggccgcgctttgaattgctcttcgtctgtgacccag
aacagtaagcagagaacataagggaaacacacagaaaactgaaagtgaga
aaacatacacaagaactcaaagaagaaactgacagcacctaagttacttg
ttggagtttttgacaacttagcaccaactccaacacacctgacaagaagg
aacctcagctgaaaagctgcctcattcagactggcctgtgccagacgttc
tcaacctacgcatcgtaacccttctgggggtctaatgagatcctcacagg
ggacgcatatttatcagatacttacattatgatccataacagtagcaaaa
ttacagttatgaagcagcatcaaagataattttatggttggggttcagca
caccctgaggaactgtattaaagggtcccagcattaggaaggctgagaac
cactggcctatgggcatgtctatgaagcattcccttgattgttagtcaac
gtaggaaggcccagtcctcaaagagccgtatcatctgtgggcggttggcc
tgggctgtattaagaaaggtacctgagccagctagagaaagaaagctagt
aagcaggattcttccatgttcacttctgcagttcctacctgttcctgcct
tggctttccttgcttgcagattgtaatcagtaaaccggccaaacaaaccc
tttccttcccgcaacttgcttttggttcatcacaagagaaatcaaactag
gccatttaccaaagctcccttgtcagtagtcaccacctaccatgtgggtc
tccactgttgtttcatttctcttgagataaatgtgtctcctggggtagaa
aagaggaaggggcggggtgggctctgaacagtgccctttcaactgggcac
taatgtcaagggcattgcatgctctgcacagagcacagcacgctttgcat
ccagcaccagcacaagatggtttcaacaaatcagctgctggtgctgtggg
atgtgtcctctgcagtgtctgggagaagcctaaaacccagcttgtttggc
tttgctttggcagtttatttaaggactcccacta
ttaggaaggtgctgtgagaaaaagcaagcagcacaggacgggggacttag
cactcagcaagtgttacctacggcttgtaactctaactctcagcctgctg
tttggtggatgaccaatccctcccttcccctatgtgtgccatggagtttt
gtgtgtccttggctactataattcatgccacaaacttgggctcttcagac
gacaaagcttatcctcacagttctagatgctgcaagtctaacatcctgca
gtcatatcttctcctaggaggcaagagtaataattgttccttgacttatt
tagggttcttaattgtgcagatatgcatgcctatatgtctctagtcaggc
acttaccaagtaggctacgctggatggccaacaagcctgggatggatgga
tggatggatggatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_63842948_63844081
seq2: B6Ng01-041P19.b_46_1179

seq1  GAATTCCAAAATTCCACAGCTGAGAACCAATGAGAGTGAATCCAAGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAATTCCACAGCTGAGAACCAATGAGAGTGAATCCAAGGAGA  50

seq1  GGAGGTCTACCAATGGCCGCGCTTTGAATTGCTCTTCGTCTGTGACCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTCTACCAATGGCCGCGCTTTGAATTGCTCTTCGTCTGTGACCCAG  100

seq1  AACAGTAAGCAGAGAACATAAGGGAAACACACAGAAAACTGAAAGTGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAAGCAGAGAACATAAGGGAAACACACAGAAAACTGAAAGTGAGA  150

seq1  AAACATACACAAGAACTCAAAGAAGAAACTGACAGCACCTAAGTTACTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATACACAAGAACTCAAAGAAGAAACTGACAGCACCTAAGTTACTTG  200

seq1  TTGGAGTTTTTGACAACTTAGCACCAACTCCAACACACCTGACAAGAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTTTTTGACAACTTAGCACCAACTCCAACACACCTGACAAGAAGG  250

seq1  AACCTCAGCTGAAAAGCTGCCTCATTCAGACTGGCCTGTGCCAGACGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCAGCTGAAAAGCTGCCTCATTCAGACTGGCCTGTGCCAGACGTTC  300

seq1  TCAACCTACGCATCGTAACCCTTCTGGGGGTCTAATGAGATCCTCACAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTACGCATCGTAACCCTTCTGGGGGTCTAATGAGATCCTCACAGG  350

seq1  GGACGCATATTTATCAGATACTTACATTATGATCCATAACAGTAGCAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGCATATTTATCAGATACTTACATTATGATCCATAACAGTAGCAAAA  400

seq1  TTACAGTTATGAAGCAGCATCAAAGATAATTTTATGGTTGGGGTTCAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTTATGAAGCAGCATCAAAGATAATTTTATGGTTGGGGTTCAGCA  450

seq1  CACCCTGAGGAACTGTATTAAAGGGTCCCAGCATTAGGAAGGCTGAGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGAGGAACTGTATTAAAGGGTCCCAGCATTAGGAAGGCTGAGAAC  500

seq1  CACTGGCCTATGGGCATGTCTATGAAGCATTCCCTTGATTGTTAGTCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCCTATGGGCATGTCTATGAAGCATTCCCTTGATTGTTAGTCAAC  550

seq1  GTAGGAAGGCCCAGTCCTCAAAGAGCCGTATCATCTGTGGGCGGTTGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAAGGCCCAGTCCTCAAAGAGCCGTATCATCTGTGGGCGGTTGGCC  600

seq1  TGGGCTGTATTAAGAAAGGTACCTGAGCCAGCTAGAGAAAGAAAGCTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGTATTAAGAAAGGTACCTGAGCCAGCTAGAGAAAGAAAGCTAGT  650

seq1  AAGCAGGATTCTTCCATGTTCACTTCTGCAGTTCCTACCTGTTCCTGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGATTCTTCCATGTTCACTTCTGCAGTTCCTACCTGTTCCTGCCT  700

seq1  TGGCTTTCCTTGCTTGCAGATTGTAATCAGTAAACCGGCCAAACAAACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTCCTTGCTTGCAGATTGTAATCAGTAAACCGGCCAAACAAACCC  750

seq1  TTTCCTTCCCGCAACTTGCTTTTGGTTCATCACAAGAGAAATCAAACTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCCCGCAACTTGCTTTTGGTTCATCACAAGAGAAATCAAACTAG  800

seq1  GCCATTTACCAAAGCTCCCTTGTCAGTAGTCACCACCTACCATGTGGGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTACCAAAGCTCCCTTGTCAGTAGTCACCACCTACCATGTGGGTC  850

seq1  TCCACTGTTGTTTCATTTCTCTTGAGATAAATGTGTCTCCTGGGGTAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGTTGTTTCATTTCTCTTGAGATAAATGTGTCTCCTGGGGTAGAA  900

seq1  AAGAGGTAAGGGGCGGGGTGGGCTCTGAACAGTGCCCTTTCACCTGGCCA  950
      |||||| ||||||||||||||||||||||||||||||||||| |||| ||
seq2  AAGAGG-AAGGGGCGGGGTGGGCTCTGAACAGTGCCCTTTCAACTGGGCA  949

seq1  CT-ATGTTCAGGGCATTGCATGCTCTGCACAGAGCACAGCACGC-TTGCA  998
      || ||||  ||||||||||||||||||||||||||||||||||| |||||
seq2  CTAATGTCAAGGGCATTGCATGCTCTGCACAGAGCACAGCACGCTTTGCA  999

seq1  TCCAGCACCAGCACAAGATGGTTTCAACAAATCAGCTGCCTGTGCTGTGG  1048
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  TCCAGCACCAGCACAAGATGGTTTCAACAAATCAGCTGCTGGTGCTGTGG  1049

seq1  GATGTTGTCTCTGCAGTGTCT-GGAGAAGCCCAGAAACCCCAGCTTGTTT  1097
      |||||   ||||||||||||| |||||||||   ||| ||||||||||||
seq2  GATGTGTCCTCTGCAGTGTCTGGGAGAAGCC--TAAAACCCAGCTTGTTT  1097

seq1  GCCTTTGCTTTGGCAGTTTAATTTAGGACTCCCACTA  1134
      | |||||||||||||||||| || |||||||||||||
seq2  GGCTTTGCTTTGGCAGTTTATTTAAGGACTCCCACTA  1134

seq1: chr15_63939276_63939697
seq2: B6Ng01-041P19.g_71_492 (reverse)

seq1  TCCATCCATCCATCCATCCATCCATCCCAGGCTTGTTGGCCATCCAGCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCATCCATCCATCCATCCATCCCAGGCTTGTTGGCCATCCAGCGT  50

seq1  AGCCTACTTGGTAAGTGCCTGACTAGAGACATATAGGCATGCATATCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTACTTGGTAAGTGCCTGACTAGAGACATATAGGCATGCATATCTGC  100

seq1  ACAATTAAGAACCCTAAATAAGTCAAGGAACAATTATTACTCTTGCCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTAAGAACCCTAAATAAGTCAAGGAACAATTATTACTCTTGCCTCC  150

seq1  TAGGAGAAGATATGACTGCAGGATGTTAGACTTGCAGCATCTAGAACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAAGATATGACTGCAGGATGTTAGACTTGCAGCATCTAGAACTGT  200

seq1  GAGGATAAGCTTTGTCGTCTGAAGAGCCCAAGTTTGTGGCATGAATTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATAAGCTTTGTCGTCTGAAGAGCCCAAGTTTGTGGCATGAATTATA  250

seq1  GTAGCCAAGGACACACAAAACTCCATGGCACACATAGGGGAAGGGAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCAAGGACACACAAAACTCCATGGCACACATAGGGGAAGGGAGGGA  300

seq1  TTGGTCATCCACCAAACAGCAGGCTGAGAGTTAGAGTTACAAGCCGTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCATCCACCAAACAGCAGGCTGAGAGTTAGAGTTACAAGCCGTAGG  350

seq1  TAACACTTGCTGAGTGCTAAGTCCCCCGTCCTGTGCTGCTTGCTTTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTTGCTGAGTGCTAAGTCCCCCGTCCTGTGCTGCTTGCTTTTTCT  400

seq1  CACAGCACCTTCCTAAGAATTC  422
      ||||||||||||||||||||||
seq2  CACAGCACCTTCCTAAGAATTC  422