BAC Information

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BAC

Clone NameB6Ng01-045O15
Chromosome15 (Build37)9 (Build37)
Map Location 89,175,081 - 89,175,33792,990,961 - 92,991,814
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneZdhhc25, Brd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1, Adm2, Miox
Downstream geneTmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa, Shank3, Acr, Rabl2a, LOC676575, Syt10, Alg10b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045O15.bB6Ng01-045O15.g
ACCDH871232DH871233
length823853
definitionDH871232|Mus musculus domesticus DNA, BAC clone: B6Ng01-045O15, 5' end.DH871233|Mus musculus domesticus DNA, BAC clone: B6Ng01-045O15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(89,175,081 - 89,175,337)(92,990,961 - 92,991,814)
sequence
gaattctctaatgactgtattgtgcgtgttgattacagacacatttcagt
ttctgaagttttcccaaaaattgcagttcctgaaagcagcaagcaggaaa
atcattagtgttatatctattcaacagcaaagaggatacttgagaatcat
ccacatcttgctcttgtcagtttgtccttagtttttggcgttgtgagatt
gccccagatggatcctatggcatgctttcactctgagttagaatgagcca
ctcagaaaggaaccttggcccttcttttcagggtgtagttttagattccc
aagataaacaggaagtgagtgctgggtatgctattttttaatgtcaatga
ggagacctggaaagaagctgtgtatacaaagactgatagcaatgttgtgc
tatggagaggttggaatgttgctgatcctaaggctaaatattgatctctg
tgtagctttgacctcctgaattccctgcttacctctctgtcacaactaac
accttatggtcaagagataaaaaaatttttaaaatctattaagaaatccc
tgaggcctagcaaacacagaagtggatgctcacagtcagctattggatgg
accacagggcccccaatggaggagcaagagaaagtacccaagaagctaaa
gggatctgcaatcctataggtggaacaacaatacgaactaaccagtaccc
cacccccaccccccggagctcatgtctctagctgcatatgaatcagaaga
tggcctagtcggccatcagtggaaagagaggcccattggtcgtgcaaact
ttatatgcctcagtacaggggaa
gaattccttgaatgtgtatcaaagtggttagaagtggaagataccaagtt
aaatacacagaaaggcaagtatcacacattctctttcatatgtggcagtg
attatgaatgaatgccaacttggaattacaagggaatgggaagggaaggc
agagggttgatatttgtggtgatgtgaatcagaatgttccccaaaggctc
tggtatttgaacacttaatggcactgtttgtgggaggtttagaaggtgtc
gtcttttgggaggaattatgtcactagagagtttaaatcttcacatgatt
tacagttcattgtttctgctttgagcttttggatgagatgtgatcactca
gcttcctgctccattcagcaagtcttgcttctctgcatccttaccaggac
agaactgtatccctctggaaccatgagcccaaacaaactcttccttctac
aacttgcttctggtcatggtgttttatcataagcacataaaagcaagtca
tacagaatgacattctccgtatgggactgtcaaaacaacatctaataatg
tatagaattagcccatgtaaataaaaataatgatggtaaatttgtagaag
agttgtaacacaaaaattcacaagtatcctttcactgaagagacaaacta
ctttacaggactgaaaggtaggcatcccgtgaaaagatgacaggggtgga
gtttgtggaaagactcattttatttaagagctggcagctgggagtttgat
catgcaccaacgagtatgggcacacaaaaggacttggaggcttctttttt
ctttcttttctcttttcttggtgaggtcacaaaggtgagaggatggacct
ggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_89175081_89175337
seq2: B6Ng01-045O15.b_599_868 (reverse)

seq1  TTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTT  50
      ||||||||||||| ||||||||||||||||| | ||||||||||||||||
seq2  TTCCCCTGTACTGAGGCATATAAAGTTTGCACGACCAATGGGCCTCTCTT  50

seq1  TCCAGTGATGGGCGACTAGGCCATCTTTTGGTACATATGCAGCTAGAGTC  100
      |||| |||||| ||||||||||||||| || | ||||||||||||||| |
seq2  TCCACTGATGGCCGACTAGGCCATCTTCTGATTCATATGCAGCTAGAGAC  100

seq1  AAGAGCTCC-------------GGGGTACTGGTTAGTTCATATTGTTGTT  137
      | |||||||             ||||||||||||||||| ||||||||||
seq2  ATGAGCTCCGGGGGGTGGGGGTGGGGTACTGGTTAGTTCGTATTGTTGTT  150

seq1  CCACCTATAGGGTTGCAGATCTCTTTAGCTCCTTGGATACTTTCTCTAGC  187
      ||||||||||| ||||||||| |||||||| ||||| |||||||||| ||
seq2  CCACCTATAGGATTGCAGATCCCTTTAGCTTCTTGGGTACTTTCTCTTGC  200

seq1  TCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCC  237
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCCTCCATTGGGGGCCCTGTGGTCCATCCAATAGCTGACTGTGAGCATCC  250

seq1  ACTTCTGTGTTTGCTAGGCC  257
      ||||||||||||||||||||
seq2  ACTTCTGTGTTTGCTAGGCC  270

seq1: chr9_92990961_92991814
seq2: B6Ng01-045O15.g_75_918

seq1  TGAATGTGTATCAAAGTGGTTAGAAGTGGAAGATACCAAGTTAAATACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTGTATCAAAGTGGTTAGAAGTGGAAGATACCAAGTTAAATACAC  50

seq1  AGAAAGGCAAGTATCACACATTCTCTTTCATATGTGGCAGTGATTATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGCAAGTATCACACATTCTCTTTCATATGTGGCAGTGATTATGAA  100

seq1  TGAATGCCAACTTGGAATTACAAGGGAATGGGAAGGGAAGGCAGAGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCCAACTTGGAATTACAAGGGAATGGGAAGGGAAGGCAGAGGGTT  150

seq1  GATATTTGTGGTGATGTGAATCAGAATGTTCCCCAAAGGCTCTGGTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTGTGGTGATGTGAATCAGAATGTTCCCCAAAGGCTCTGGTATTT  200

seq1  GAACACTTAATGGCACTGTTTGTGGGAGGTTTAGAAGGTGTCGTCTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTTAATGGCACTGTTTGTGGGAGGTTTAGAAGGTGTCGTCTTTTG  250

seq1  GGAGGAATTATGTCACTAGAGAGTTTAAATCTTCACATGATTTACAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAATTATGTCACTAGAGAGTTTAAATCTTCACATGATTTACAGTTC  300

seq1  ATTGTTTCTGCTTTGAGCTTTTGGATGAGATGTGATCACTCAGCTTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTCTGCTTTGAGCTTTTGGATGAGATGTGATCACTCAGCTTCCTG  350

seq1  CTCCATTCAGCAAGTCTTGCTTCTCTGCATCCTTACCAGGACAGAACTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTCAGCAAGTCTTGCTTCTCTGCATCCTTACCAGGACAGAACTGT  400

seq1  ATCCCTCTGGAACCATGAGCCCAAACAAACTCTTCCTTCTACAACTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTCTGGAACCATGAGCCCAAACAAACTCTTCCTTCTACAACTTGCT  450

seq1  TCTGGTCATGGTGTTTTATCATAAGCACATAAAAGCAAGTCATACAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCATGGTGTTTTATCATAAGCACATAAAAGCAAGTCATACAGAAT  500

seq1  GACATTCTCCGTATGGGACTGTCAAAACAACATCTAATAATGTATAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCTCCGTATGGGACTGTCAAAACAACATCTAATAATGTATAGAAT  550

seq1  TAGCCCATGTAAATAAAAATAATGATGGTAAATTTGTAGAAGAGTTGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCATGTAAATAAAAATAATGATGGTAAATTTGTAGAAGAGTTGTAA  600

seq1  CACAAAAATTCACAAGTATCCTTTCACTGAAGAGACAAACTAC-TTACAG  649
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CACAAAAATTCACAAGTATCCTTTCACTGAAGAGACAAACTACTTTACAG  650

seq1  GACTGAAAGGTAGGCATCCCGTGGAAAAGGATGACAGGGGTGGAG-TTGT  698
      |||||||||||||||||||||||  ||| |||||||||||||||| ||||
seq2  GACTGAAAGGTAGGCATCCCGTG--AAAAGATGACAGGGGTGGAGTTTGT  698

seq1  GGAAGGACTCAGTTTTATTTAAGGAGCTGGCAGCTGGGAGTTTGATCATG  748
      |||| |||||| |||||||||| |||||||||||||||||||||||||||
seq2  GGAAAGACTCA-TTTTATTTAA-GAGCTGGCAGCTGGGAGTTTGATCATG  746

seq1  CACCAACGAGTATTGGGCAACACAAAAGGGACTTGGTGGCTTCTTTTTTC  798
      |||||||||||| ||||| |||||||| |||||||| |||||||||||||
seq2  CACCAACGAGTA-TGGGC-ACACAAAA-GGACTTGGAGGCTTCTTTTTTC  793

seq1  TTTCTTTTTCTCTTTTTCTTGGGTGAGGGTCACAAAGGTTGAGAGGATGG  848
      |||| ||||||| ||||||| ||||| ||||||||||| |||||||||||
seq2  TTTC-TTTTCTC-TTTTCTT-GGTGA-GGTCACAAAGG-TGAGAGGATGG  838

seq1  ACCTGG  854
      ||||||
seq2  ACCTGG  844