BAC Information

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BAC

Clone NameB6Ng01-046B15
Chromosome15 (Build37)
Map Location 38,880,848 - 39,034,344
singlet/doubletdoublet
Overlap geneLOC636952, Cthrc1, Slc25a32, Wdsof1, LOC671215, Rims2
Upstream geneRrm2b, Edd1, Odf1, LOC382986, LOC667563, Klf10, Azin1, Siah1-ps2, Atp6v1c1, Baalc, TOB3L, Fzd6
Downstream geneTm7sf4, Dpys, Lrp12, LOC100039130, LOC670013
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046B15.bB6Ng01-046B15.g
ACCDH871367DH871368
length1,1231,231
definitionDH871367|Mus musculus domesticus DNA, BAC clone: B6Ng01-046B15, 5' end.DH871368|Mus musculus domesticus DNA, BAC clone: B6Ng01-046B15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,880,848 - 38,881,977)(39,033,068 - 39,034,344)
sequence
gaattcacctgggaaaagagaattactcactccatgaacacagtgtgttg
tgtgcacgtgcttgccacatgcaatcacacacacacacacacacacacac
acacacatcaaaagtaaaaataaattaagatgataggtcgggatttctgt
agagcaaggtcatctgggaatcactgatggatgcaggatggaagtaacag
ttactatctggctggggaaatatgccttatgtatatgggaacatcagcct
tagatatggaaccattgctgtcagcataagggaaaactggcagaatggag
tcagagatgagctggtagcttttctcagcatactatctggtaaccaagcg
tactgaggctggtgaacatgggaattgaaaggtttttgggttttgttttg
ttttgttttgttcgctgtgtccagagctcccattctttttggtacttaga
gaagggccaatccaagtggagatgctttagaattgtcaccgctgaagtga
aacttgcaataaagcaatgaaaatctagggagacttattagaacatgacc
taggtttgaggagtcagctcggtcgtcaaatgcttcctggtattcataaa
gctctgggattcctcctcagaatatgacccagagtcatgtatgggtacct
aggtcaatactcggctatttatcccatcttacccattttttaaaaataaa
atatgaatacattgttgctgtcttcagacacaccagaagaggacattgga
tcacattggatcccatggtggttgtgagccaccatgtggttgctgggaat
tgaattcaggacctctgaaagagcagtcagtgctctcaaccactgagcca
tctctccagctccaagatttatatttgttttggttttggttgttgtgttt
gtttgcttgtttgttgtttaagagcagttttagattacaggaaaaaattc
agtggaagctacaaagctttctcacgtacccctgctttcaaccaatggaa
atcaaaaattcccccagagtgaagaatttgtgccaccggggaaaggactg
ctcgtatactcctcggaagcccatagtgaaaccaggatacaatcctgcgt
tgcaccctctcaagggtagacac
gaattcatttcccaaaatgcaggacgcatttgcacttctttgtacacaaa
tacacatacatgcatgagcactaatatataaacacatctagttacatgag
tatatatatttgtacctcaattttatcgtgcaaagaataaatgttctagt
aacaataattgcacataggcaaattggtaaataagatattttgtagcaaa
agtatatattatctattaaataaaaattgtaaattaacttcagaaaccac
ttataaaattgcactattaaaaaatttaagctggatgtggtggcgcatac
atggatattaccagcacttgggaggcagaatcgatcagatctgtgtgagt
ttgaggccagcctggtctacacagttaattccaggacagccagggctatg
tagaaagaccctgtcctaaaataaaataaaataaaataaaataaaataaa
acattagccagaaactgtagcatatacctttaatactagcctagcacttg
ggtggcagggacaggtggatctctgagttttaaggccagtctggtctatg
taccaaattccaaacaagccagggctacaaagcaataccctgtctcaagc
ataaataaatgaattaaactaagtacaataaaacatttataactcctcat
atgtgtatacagtatgtacttgttaacttaatctgtcatggatgtgcttt
attctttcgatttgaggaacatgttgtcctatcaacattaatagaaagcc
caagctgagaacaaagacaatacacatctcctgaaaagcataaataggtg
tggtagctcaatgactggtcatcccagcacttgggattagaaaggcagag
gcagaagaatcatttaaagtcaacctgggctacacagaaagacactatca
aatgaaagaaaggaggaaagagcggaaaagattttaaaaaaaaagtagga
gaaagagagaagagtgttcaaatactttgtataaaaagactatgtgcgaa
caaaataaaacacattaaccatttcttgaatacctttctactgatttagt
cgaccaaataaaataaacaaaagacatgtatcacagtcctaaataggttt
cttcaaacatgaatcgctctttttccacgaaagagtgaactgttcatgcc
tgggagtcgctcaatacttcaaggtaccatattgttagaagcagggacca
gaacccggactcctcaggctcaggcctgaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_38880848_38881977
seq2: B6Ng01-046B15.b_44_1166

seq1  GAATTCACCTGGGAAAAGAGAATTACTCACTCCATGAACACAGTGTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTGGGAAAAGAGAATTACTCACTCCATGAACACAGTGTGTTG  50

seq1  TGTGCACGTGCTTGCCACATGCAATCACACACACACACACACACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACGTGCTTGCCACATGCAATCACACACACACACACACACACACAC  100

seq1  ACACACATCAAAAGTAAAAATAAATTAAGATGATAGGTCGGGATTTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATCAAAAGTAAAAATAAATTAAGATGATAGGTCGGGATTTCTGT  150

seq1  AGAGCAAGGTCATCTGGGAATCACTGATGGATGCAGGATGGAAGTAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAGGTCATCTGGGAATCACTGATGGATGCAGGATGGAAGTAACAG  200

seq1  TTACTATCTGGCTGGGGAAATATGCCTTATGTATATGGGAACATCAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATCTGGCTGGGGAAATATGCCTTATGTATATGGGAACATCAGCCT  250

seq1  TAGATATGGAACCATTGCTGTCAGCATAAGGGAAAACTGGCAGAATGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATGGAACCATTGCTGTCAGCATAAGGGAAAACTGGCAGAATGGAG  300

seq1  TCAGAGATGAGCTGGTAGCTTTTCTCAGCATACTATCTGGTAACCAAGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATGAGCTGGTAGCTTTTCTCAGCATACTATCTGGTAACCAAGCG  350

seq1  TACTGAGGCTGGTGAACATGGGAATTGAAAGGTTTTTGGGTTTTGTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGGCTGGTGAACATGGGAATTGAAAGGTTTTTGGGTTTTGTTTTG  400

seq1  TTTTGTTTTGTTCGCTGTGTCCAGAGCTCCCATTCTTTTTGGTACTTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTCGCTGTGTCCAGAGCTCCCATTCTTTTTGGTACTTAGA  450

seq1  GAAGGGCCAATCCAAGTGGAGATGCTTTAGAATTGTCACCGCTGAAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGCCAATCCAAGTGGAGATGCTTTAGAATTGTCACCGCTGAAGTGA  500

seq1  AACTTGCAATAAAGCAATGAAAATCTAGGGAGACTTATTAGAACATGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCAATAAAGCAATGAAAATCTAGGGAGACTTATTAGAACATGACC  550

seq1  TAGGTTTGAGGAGTCAGCTCGGTCGTCAAATGCTTCCTGGTATTCATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTGAGGAGTCAGCTCGGTCGTCAAATGCTTCCTGGTATTCATAAA  600

seq1  GCTCTGGGATTCCTCCTCAGAATATGACCCAGAGTCATGTATGGGTACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGATTCCTCCTCAGAATATGACCCAGAGTCATGTATGGGTACCT  650

seq1  AGGTCAATACTCGGCTATTTATCCCATCTTACCCATTTTTTAAAAATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAATACTCGGCTATTTATCCCATCTTACCCATTTTTTAAAAATAAA  700

seq1  ATATGAATACATTGTTGCTGTCTTCAGACACACCAGAAGAGGACATTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAATACATTGTTGCTGTCTTCAGACACACCAGAAGAGGACATTGGA  750

seq1  TCACATTGGATCCCATGGTGGTTGTGAGCCACCATGTGGTTGCTGGGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTGGATCCCATGGTGGTTGTGAGCCACCATGTGGTTGCTGGGAAT  800

seq1  TGAATTCAGGACCTCTGAAAGAGCAGTCAGTGCTCTCAACCACTGAGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCAGGACCTCTGAAAGAGCAGTCAGTGCTCTCAACCACTGAGCCA  850

seq1  TCTCTCCAGCTCCAAGATTTATATTTGTTTTGGTTTTGGTTGTTGTTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCTCTCCAGCTCCAAGATTTATATTTGTTTTGGTTTTGGTTGTTG-TGTT  899

seq1  TGTTTGCTTGTTTGTTTGTTTAAGAGCAGTTTTAGATTTACAGGAAAAAA  950
      |||||||||||||| ||||||||||||||||||||| ||||||| |||||
seq2  TGTTTGCTTGTTTG-TTGTTTAAGAGCAGTTTTAGA-TTACAGG-AAAAA  946

seq1  ATTCAGTGGAAGCTACAAAGCTTTCTCACGTACCCCTGCTTTCAAACACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||| ||  
seq2  ATTCAGTGGAAGCTACAAAGCTTTCTCACGTACCCCTGCTTTCAACCAAT  996

seq1  TGAAATCAAAATTCCCACCAGAGTGATGTATTTGTGGCCACTGGTGAAAT  1050
       |||||||||| | || ||||||||| | |||||| ||||| || |||| 
seq2  GGAAATCAAAAATTCCCCCAGAGTGAAGAATTTGT-GCCACCGGGGAAAG  1045

seq1  GACTGCTGATA-ACTCATCGGAGGCCTATAGTTGACACCAGGGATCAATC  1099
      |||||||  || |||| ||||| ||| |||| ||| ||||||   |||||
seq2  GACTGCTCGTATACTCCTCGGAAGCCCATAG-TGAAACCAGGATACAATC  1094

seq1  CTTGCGTTGCACCCTCT-AAGGGTTTAGACAC  1130
      | ||||||||||||||| |||||  |||||||
seq2  C-TGCGTTGCACCCTCTCAAGGG--TAGACAC  1123

seq1: chr15_39033068_39034344
seq2: B6Ng01-046B15.g_68_1298 (reverse)

seq1  GTTCAGCCCTGAGCCTTGAGGAGTCACTGGTTATCTTGCTCCTTGGCATC  50
      |||||| |||||||| ||||||||| | ||||    || ||| | || ||
seq2  GTTCAGGCCTGAGCC-TGAGGAGTC-CGGGTT---CTGGTCCCT-GCTTC  44

seq1  TTAACACATAATAGGTACCTAGGAAGTAATGTTGAGCTGAACTACCATGC  100
       ||||| |||   |||||||  ||||||   ||||||   ||| ||| ||
seq2  -TAACA-ATA--TGGTACCT-TGAAGTA---TTGAGC--GACTCCCAGGC  84

seq1  AAATGAAACAGTTCACTCATTCTGTGGAAAAAAGACGATTCATTGTTTTG  150
        ||| |||||||||||| ||| |||||||||   ||||||||   ||||
seq2  --ATG-AACAGTTCACTCTTTC-GTGGAAAAAGAGCGATTCAT--GTTTG  128

seq1  AAAGAAAAACTATTTAGGGACTGTGTATTACCATTGTCTTTTGTTTTTAT  200
      ||   ||| ||||||| ||||||||   |||   |||||||||  |||||
seq2  AA--GAAACCTATTTA-GGACTGTG--ATAC--ATGTCTTTTG--TTTAT  169

seq1  TTTATTTTGGTCTGACTAAAAATCAAGTAGAAAGGTATTCAGGAAATGTG  250
      |||| ||||||| ||||  ||||| |||||||||||||||| ||||||  
seq2  TTTA-TTTGGTC-GACT--AAATC-AGTAGAAAGGTATTCAAGAAATGGT  214

seq1  TAATGTGGTTTTATTATGTTCGCAACATAGTCTTTTTATACAAAGTATTT  300
      |||||| |||||||| ||||||| ||||||||||||||||||||||| ||
seq2  TAATGT-GTTTTATTTTGTTCGC-ACATAGTCTTTTTATACAAAGTA-TT  261

seq1  TGAACACTTCTTCCTTCTCTTTCTCCCTACTTTTTTTTTTAAAATCTTTT  350
      ||||||| |||||  ||||||||| ||||| |||||||||||||||||||
seq2  TGAACAC-TCTTC--TCTCTTTCT-CCTAC-TTTTTTTTTAAAATCTTTT  306

seq1  CCGCTCTTTTCCTCCCTTTCTTTCATTTGATAGTGTCTTTCTGTGTAGCC  400
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  CCGCTC-TTTCCT-CCTTTCTTTCATTTGATAGTGTCTTTCTGTGTAGCC  354

seq1  CAGGTTGACCTTAAATGATTCTTCTGCCTCTGCCTTTCTAATCCCAAGTG  450
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTGACTTTAAATGATTCTTCTGCCTCTGCCTTTCTAATCCCAAGTG  404

seq1  CTGGGATGACCAGTCATTGAGCTACCACACCTATTTATGCTTTTCAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATGACCAGTCATTGAGCTACCACACCTATTTATGCTTTTCAGGAG  454

seq1  ATGTGTATTGTCTTTGTTCTCAGCTTGGGCTTTCTATTAATGTTGATAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATTGTCTTTGTTCTCAGCTTGGGCTTTCTATTAATGTTGATAGG  504

seq1  ACAACATGTTCCTCAAATCGAAAGAATAAAGCACATCCATGACAGATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATGTTCCTCAAATCGAAAGAATAAAGCACATCCATGACAGATTAA  554

seq1  GTTAACAAGTACATACTGTATACACATATGAGGAGTTATAAATGTTTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACAAGTACATACTGTATACACATATGAGGAGTTATAAATGTTTTAT  604

seq1  TGTACTTAGTTTAATTCATTTATTTATGCTTGAGACAGGGTATTGCTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTAGTTTAATTCATTTATTTATGCTTGAGACAGGGTATTGCTTTG  654

seq1  TAGCCCTGGCTTGTTTGGAATTTGGTACATAGACCAGACTGGCCTTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTGGCTTGTTTGGAATTTGGTACATAGACCAGACTGGCCTTAAAA  704

seq1  CTCAGAGATCCACCTGTCCCTGCCACCCAAGTGCTAGGCTAGTATTAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGATCCACCTGTCCCTGCCACCCAAGTGCTAGGCTAGTATTAAAG  754

seq1  GTATATGCTACAGTTTCTGGCTAATGTTTTATTTTATTTTATTTTATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGCTACAGTTTCTGGCTAATGTTTTATTTTATTTTATTTTATTTT  804

seq1  ATTTTATTTTAGGACAGGGTCTTTCTACATAGCCCTGGCTGTCCTGGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTTAGGACAGGGTCTTTCTACATAGCCCTGGCTGTCCTGGAAT  854

seq1  TAACTGTGTAGACCAGGCTGGCCTCAAACTCACACAGATCTGATCGATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTGTAGACCAGGCTGGCCTCAAACTCACACAGATCTGATCGATTC  904

seq1  TGCCTCCCAAGTGCTGGTAATATCCATGTATGCGCCACCACATCCAGCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCAAGTGCTGGTAATATCCATGTATGCGCCACCACATCCAGCTT  954

seq1  AAATTTTTTAATAGTGCAATTTTATAAGTGGTTTCTGAAGTTAATTTACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTTAATAGTGCAATTTTATAAGTGGTTTCTGAAGTTAATTTACA  1004

seq1  ATTTTTATTTAATAGATAATATATACTTTTGCTACAAAATATCTTATTTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTTAATAGATAATATATACTTTTGCTACAAAATATCTTATTTA  1054

seq1  CCAATTTGCCTATGTGCAATTATTGTTACTAGAACATTTATTCTTTGCAC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTGCCTATGTGCAATTATTGTTACTAGAACATTTATTCTTTGCAC  1104

seq1  GATAAAATTGAGGTACAAATATATATACTCATGTAACTAGATGTGTTTAT  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATTGAGGTACAAATATATATACTCATGTAACTAGATGTGTTTAT  1154

seq1  ATATTAGTGCTCATGCATGTATGTGTATTTGTGTACAAAGAAGTGCAAAT  1250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGTGCTCATGCATGTATGTGTATTTGTGTACAAAGAAGTGCAAAT  1204

seq1  GCGTCCTGCATTTTGGGAAATGAATTC  1277
      |||||||||||||||||||||||||||
seq2  GCGTCCTGCATTTTGGGAAATGAATTC  1231